PAXIP1-AS2

Summary

PAXIP1-AS2 (PAXIP1 antisense RNA 2, HGNC:48958) is a long non-coding RNA gene on chromosome 7q36.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48958
Approved symbol	PAXIP1-AS2
Name	PAXIP1 antisense RNA 2
Location	7q36.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000214106
Ensembl biotype	lncRNA
Entrez	100132707
RNAcentral	URS000075A023 — lncRNA, 1714 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000397551, ENST00000411526, ENST00000449486, ENST00000646803, ENST00000656459, ENST00000657268, ENST00000661090, ENST00000662567, ENST00000662713, ENST00000810855, ENST00000810856

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000397551 — 3 exons

Exon	Start	End
ENSE00001553386	154928517	154928767
ENSE00001553792	154944027	154945398
ENSE00001563272	154928956	154929024

Expression profiles

Bgee: expression breadth ubiquitous, 195 present calls, max score 88.67.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 4.1718 / max 62.0204, expressed in 1306 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
82200	4.1718	1306

Top tissues by expression

235 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	88.67	gold quality
tendon of biceps brachii	UBERON:0008188	81.39	gold quality
calcaneal tendon	UBERON:0003701	81.06	gold quality
tendon	UBERON:0000043	80.92	gold quality
left ovary	UBERON:0002119	79.91	gold quality
leukocyte	CL:0000738	79.62	gold quality
monocyte	CL:0000576	79.56	gold quality
cerebellar hemisphere	UBERON:0002245	79.48	gold quality
cerebellar cortex	UBERON:0002129	79.36	gold quality
right hemisphere of cerebellum	UBERON:0014890	79.28	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.22	gold quality
smooth muscle tissue	UBERON:0001135	79.01	gold quality
granulocyte	CL:0000094	78.64	gold quality
right ovary	UBERON:0002118	78.49	gold quality
adrenal tissue	UBERON:0018303	78.47	gold quality
vermiform appendix	UBERON:0001154	78.12	gold quality
lymph node	UBERON:0000029	78.04	gold quality
gall bladder	UBERON:0002110	77.89	gold quality
left adrenal gland	UBERON:0001234	77.75	gold quality
right adrenal gland	UBERON:0001233	77.67	gold quality
right adrenal gland cortex	UBERON:0035827	77.45	gold quality
right lobe of liver	UBERON:0001114	77.29	gold quality
left adrenal gland cortex	UBERON:0035825	77.18	gold quality
endocervix	UBERON:0000458	77.14	gold quality
body of uterus	UBERON:0009853	77.12	gold quality
right uterine tube	UBERON:0001302	76.98	gold quality
ovary	UBERON:0000992	76.97	gold quality
cerebellum	UBERON:0002037	76.81	gold quality
right coronary artery	UBERON:0001625	76.72	gold quality
left coronary artery	UBERON:0001626	76.50	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.60

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.