PCBP3-AS1

Summary

PCBP3-AS1 (PCBP3 antisense RNA 1, HGNC:40426) is a long non-coding RNA gene on chromosome 21q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40426
Approved symbol	PCBP3-AS1
Name	PCBP3 antisense RNA 1
Location	21q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000205424
Ensembl biotype	lncRNA
Entrez	100129027
RNAcentral	URS000075C1F1 — lncRNA, 3586 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000380008

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000380008 — 3 exons

Exon	Start	End
ENSE00001483372	45827961	45831241
ENSE00001483374	45832608	45832658
ENSE00001483375	45836286	45837987

Expression profiles

Bgee: expression breadth broad, 28 present calls, max score 54.75.

Top tissues by expression

28 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stromal cell of endometrium	CL:0002255	54.75	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	48.77	gold quality
endometrium	UBERON:0001295	47.66	silver quality
adrenal gland	UBERON:0002369	46.72	silver quality
myometrium	UBERON:0001296	46.36	gold quality
body of uterus	UBERON:0009853	44.69	gold quality
cerebellum	UBERON:0002037	44.41	silver quality
blood	UBERON:0000178	44.00	silver quality
cerebellar cortex	UBERON:0002129	43.93	silver quality
cerebellar hemisphere	UBERON:0002245	43.37	silver quality
omental fat pad	UBERON:0010414	41.82	silver quality
hypothalamus	UBERON:0001898	41.76	silver quality
right hemisphere of cerebellum	UBERON:0014890	41.42	silver quality
body of stomach	UBERON:0001161	41.30	silver quality
Ammon’s horn	UBERON:0001954	41.11	silver quality
cerebral cortex	UBERON:0000956	40.77	silver quality
right frontal lobe	UBERON:0002810	40.40	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	40.40	gold quality
fallopian tube	UBERON:0003889	40.14	silver quality
pituitary gland	UBERON:0000007	40.13	gold quality
nucleus accumbens	UBERON:0001882	39.91	silver quality
caudate nucleus	UBERON:0001873	39.80	silver quality
Brodmann (1909) area 9	UBERON:0013540	39.79	silver quality
adenohypophysis	UBERON:0002196	37.64	silver quality
muscle layer of sigmoid colon	UBERON:0035805	37.28	silver quality
anterior cingulate cortex	UBERON:0009835	36.59	silver quality
amygdala	UBERON:0001876	36.07	silver quality
substantia nigra	UBERON:0002038	34.94	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.