PCDH7-AS1

Summary

PCDH7-AS1 (PCDH7 antisense RNA 1, HGNC:58750) is a long non-coding RNA gene on chromosome 4p15.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58750
Approved symbol	PCDH7-AS1
Name	PCDH7 antisense RNA 1
Location	4p15.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000286596
Ensembl biotype	lncRNA
Entrez	143433682

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000660555, ENST00000749550, ENST00000749551, ENST00000749552

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000660555 — 2 exons

Exon	Start	End
ENSE00003861458	30720170	30721970
ENSE00003871125	30718805	30719348

Expression profiles

Bgee: expression breadth ubiquitous, 116 present calls, max score 73.90.

Top tissues by expression

116 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stromal cell of endometrium	CL:0002255	73.90	gold quality
descending thoracic aorta	UBERON:0002345	71.98	gold quality
prefrontal cortex	UBERON:0000451	71.79	gold quality
superior frontal gyrus	UBERON:0002661	71.40	gold quality
thoracic aorta	UBERON:0001515	70.76	gold quality
ascending aorta	UBERON:0001496	70.22	gold quality
cortical plate	UBERON:0005343	69.91	gold quality
colonic epithelium	UBERON:0000397	69.12	silver quality
urinary bladder	UBERON:0001255	68.40	gold quality
mucosa of stomach	UBERON:0001199	67.19	gold quality
sural nerve	UBERON:0015488	67.12	gold quality
right coronary artery	UBERON:0001625	66.90	gold quality
frontal cortex	UBERON:0001870	66.43	gold quality
primary visual cortex	UBERON:0002436	66.09	gold quality
popliteal artery	UBERON:0002250	65.82	gold quality
tibial artery	UBERON:0007610	65.72	gold quality
smooth muscle tissue	UBERON:0001135	64.92	gold quality
ventricular zone	UBERON:0003053	64.04	gold quality
lower esophagus	UBERON:0013473	63.47	gold quality
lower esophagus muscularis layer	UBERON:0035833	63.44	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	62.46	gold quality
left coronary artery	UBERON:0001626	62.42	gold quality
heart left ventricle	UBERON:0002084	61.99	gold quality
cerebral cortex	UBERON:0000956	61.42	gold quality
ganglionic eminence	UBERON:0004023	60.22	gold quality
heart	UBERON:0000948	59.79	gold quality
endometrium	UBERON:0001295	59.70	gold quality
muscle layer of sigmoid colon	UBERON:0035805	59.48	gold quality
gall bladder	UBERON:0002110	59.26	gold quality
anterior cingulate cortex	UBERON:0009835	59.26	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.