PCGF3-AS2

Summary

PCGF3-AS2 (PCGF3 antisense RNA 2, HGNC:40506) is a long non-coding RNA gene on chromosome 4p16.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40506
Approved symbol	PCGF3-AS2
Name	PCGF3 antisense RNA 2
Location	4p16.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC107464.2
Ensembl gene	ENSG00000248416
Ensembl biotype	lncRNA
Entrez	138842257
RNAcentral	URS0000016159 — lncRNA, 569 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000502923

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502923 — 2 exons

Exon	Start	End
ENSE00002075629	723629	724034
ENSE00002086013	722275	722437

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 74.08.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	74.08	gold quality
colonic epithelium	UBERON:0000397	66.11	silver quality
bone marrow cell	CL:0002092	64.65	silver quality
bone marrow	UBERON:0002371	64.11	gold quality
ganglionic eminence	UBERON:0004023	61.83	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	59.96	gold quality
urinary bladder	UBERON:0001255	59.79	gold quality
tonsil	UBERON:0002372	58.34	silver quality
apex of heart	UBERON:0002098	56.98	gold quality
blood	UBERON:0000178	54.84	gold quality
monocyte	CL:0000576	54.41	gold quality
gall bladder	UBERON:0002110	53.84	gold quality
stromal cell of endometrium	CL:0002255	53.47	silver quality
placenta	UBERON:0001987	53.15	gold quality
liver	UBERON:0002107	52.79	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	51.45	gold quality
adrenal tissue	UBERON:0018303	51.06	gold quality
kidney	UBERON:0002113	50.94	silver quality
lymph node	UBERON:0000029	50.71	silver quality
islet of Langerhans	UBERON:0000006	50.38	gold quality
calcaneal tendon	UBERON:0003701	49.79	silver quality
vermiform appendix	UBERON:0001154	49.68	gold quality
prefrontal cortex	UBERON:0000451	48.73	gold quality
granulocyte	CL:0000094	48.71	silver quality
cortex of kidney	UBERON:0001225	48.41	silver quality
pancreas	UBERON:0001264	48.16	gold quality
left adrenal gland cortex	UBERON:0035825	48.09	gold quality
muscle of leg	UBERON:0001383	47.84	silver quality
adrenal gland	UBERON:0002369	47.00	gold quality
gastrocnemius	UBERON:0001388	46.94	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.