PCMTD1-DT

Summary

PCMTD1-DT (PCMTD1 divergent transcript, HGNC:55791) is a long non-coding RNA gene on chromosome 8q11.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55791
Approved symbol	PCMTD1-DT
Name	PCMTD1 divergent transcript
Location	8q11.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228801
Ensembl biotype	lncRNA
Entrez	102724330
RNAcentral	URS0002853AE8 — lncRNA, 4110 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000423716, ENST00000518942, ENST00000520357, ENST00000521188, ENST00000521612, ENST00000656129, ENST00000684825, ENST00000702548, ENST00000762741, ENST00000762742, ENST00000762743, ENST00000762744

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423716 — 2 exons

Exon	Start	End
ENSE00001627365	51899649	51899846
ENSE00002172051	51946436	51947173

Expression profiles

Bgee: expression breadth ubiquitous, 171 present calls, max score 83.78.

Top tissues by expression

252 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
hindlimb stylopod muscle	UBERON:0004252	83.78	gold quality
muscle of leg	UBERON:0001383	81.58	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	80.96	silver quality
gastrocnemius	UBERON:0001388	80.92	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.11	gold quality
skeletal muscle tissue	UBERON:0001134	79.96	gold quality
biceps brachii	UBERON:0001507	79.30	gold quality
body of pancreas	UBERON:0001150	79.15	gold quality
muscle tissue	UBERON:0002385	79.12	gold quality
vastus lateralis	UBERON:0001379	79.01	silver quality
quadriceps femoris	UBERON:0001377	78.79	silver quality
cardiac muscle of right atrium	UBERON:0003379	77.78	gold quality
left ventricle myocardium	UBERON:0006566	77.73	gold quality
pancreas	UBERON:0001264	77.07	gold quality
ventricular zone	UBERON:0003053	75.66	gold quality
bone marrow cell	CL:0002092	75.56	gold quality
islet of Langerhans	UBERON:0000006	75.15	gold quality
apex of heart	UBERON:0002098	74.15	gold quality
adenohypophysis	UBERON:0002196	74.02	gold quality
heart left ventricle	UBERON:0002084	73.66	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	73.57	silver quality
cortical plate	UBERON:0005343	73.30	gold quality
sural nerve	UBERON:0015488	73.22	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	73.09	gold quality
cardiac ventricle	UBERON:0002082	72.98	gold quality
ganglionic eminence	UBERON:0004023	72.72	gold quality
mucosa of stomach	UBERON:0001199	72.24	gold quality
pituitary gland	UBERON:0000007	72.02	gold quality
stromal cell of endometrium	CL:0002255	71.96	gold quality
deltoid	UBERON:0001476	71.56	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.