PDLIM7-AS1

Summary

PDLIM7-AS1 (PDLIM7 antisense RNA 1, HGNC:41004) is a long non-coding RNA gene on chromosome 5q35.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41004
Approved symbol	PDLIM7-AS1
Name	PDLIM7 antisense RNA 1
Location	5q35.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248996
Ensembl biotype	lncRNA
Entrez	121232374
RNAcentral	URS000016BBBC — lncRNA, 434 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000506025, ENST00000834255

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000506025 — 2 exons

Exon	Start	End
ENSE00002033831	177494995	177495138
ENSE00002074647	177503358	177503647

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 95.25.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
blood	UBERON:0000178	95.25	gold quality
monocyte	CL:0000576	92.72	gold quality
leukocyte	CL:0000738	92.36	gold quality
spleen	UBERON:0002106	89.12	gold quality
granulocyte	CL:0000094	87.55	gold quality
vermiform appendix	UBERON:0001154	87.46	gold quality
bone marrow	UBERON:0002371	84.29	gold quality
lymph node	UBERON:0000029	80.26	gold quality
right lung	UBERON:0002167	79.09	gold quality
colonic epithelium	UBERON:0000397	78.61	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.16	gold quality
upper lobe of left lung	UBERON:0008952	76.51	gold quality
bone marrow cell	CL:0002092	75.44	gold quality
tonsil	UBERON:0002372	73.75	gold quality
small intestine Peyer’s patch	UBERON:0003454	73.49	gold quality
lung	UBERON:0002048	73.07	gold quality
small intestine	UBERON:0002108	72.93	gold quality
left uterine tube	UBERON:0001303	71.72	gold quality
cortical plate	UBERON:0005343	71.46	gold quality
placenta	UBERON:0001987	70.02	gold quality
ventricular zone	UBERON:0003053	69.92	gold quality
hindlimb stylopod muscle	UBERON:0004252	69.71	gold quality
right coronary artery	UBERON:0001625	69.66	gold quality
ganglionic eminence	UBERON:0004023	69.30	gold quality
descending thoracic aorta	UBERON:0002345	68.68	gold quality
mucosa of transverse colon	UBERON:0004991	68.57	gold quality
skeletal muscle tissue	UBERON:0001134	68.53	gold quality
apex of heart	UBERON:0002098	68.41	gold quality
intestine	UBERON:0000160	68.35	gold quality
left adrenal gland cortex	UBERON:0035825	67.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.41

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.