PDS5B-DT

Summary

PDS5B-DT (PDS5B divergent transcript, HGNC:55744) is a long non-coding RNA gene on chromosome 13q13.1.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55744
Approved symbol	PDS5B-DT
Name	PDS5B divergent transcript
Location	13q13.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	Linc1749808
Entrez	107984584

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Novel long noncoding RNA Linc1749808 promotes hepatocellular carcinoma metastasis by negatively regulating miR-206. (PMID:34196215)

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000249090 (13:32586250 C>T), RS1000342045 (13:32586505 G>A,C,T), RS1000999106 (13:32585216 G>C), RS1001253922 (13:32587564 T>G), RS1001958690 (13:32587507 C>A,T), RS1002607626 (13:32585706 G>T), RS1003131800 (13:32585417 C>T), RS1004445908 (13:32586196 G>C,T), RS1004881170 (13:32585920 C>A,T), RS1004965366 (13:32587525 G>T), RS1005186313 (13:32584613 A>G), RS1005480444 (13:32587293 C>T), RS1006019431 (13:32585977 C>T), RS1006134041 (13:32585734 A>G), RS1007685399 (13:32588186 A>G)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.