PEA15

gene
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Also known as HMAT1MAT1PEDPEA-15MAT1HHUMMAT1HPED-PEA15PED/PEA15

Summary

PEA15 (proliferation and apoptosis adaptor protein 15, HGNC:8822) is a protein-coding gene on chromosome 1q23.2, encoding Astrocytic phosphoprotein PEA-15 (Q15121). Blocks Ras-mediated inhibition of integrin activation and modulates the ERK MAP kinase cascade.

This gene encodes a death effector domain-containing protein that functions as a negative regulator of apoptosis. The encoded protein is an endogenous substrate for protein kinase C. This protein is also overexpressed in type 2 diabetes mellitus, where it may contribute to insulin resistance in glucose uptake. Alternative splicing results in multiple transcript variants.

Source: NCBI Gene 8682 — RefSeq curated summary.

At a glance

  • Clinical variants (ClinVar): 13 total
  • MANE Select transcript: NM_003768

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:8822
Approved symbolPEA15
Nameproliferation and apoptosis adaptor protein 15
Location1q23.2
Locus typegene with protein product
StatusApproved
AliasesHMAT1, MAT1, PED, PEA-15, MAT1H, HUMMAT1H, PED-PEA15, PED/PEA15
Ensembl geneENSG00000162734
Ensembl biotypeprotein_coding
OMIM603434
Entrez8682

Gene structure

Transcript identifiers

Ensembl transcripts: 22 — 21 protein_coding, 1 protein_coding_CDS_not_defined

ENST00000360472, ENST00000368076, ENST00000368077, ENST00000488858, ENST00000853680, ENST00000853683, ENST00000853684, ENST00000853685, ENST00000853686, ENST00000853687, ENST00000853688, ENST00000853689, ENST00000853690, ENST00000853692, ENST00000853693, ENST00000853694, ENST00000853695, ENST00000853696, ENST00000853697, ENST00000853698, ENST00000853701, ENST00000962148

RefSeq mRNA: 4 — MANE Select: NM_003768 NM_001297576, NM_001297577, NM_001297578, NM_003768

CCDS: CCDS1199, CCDS72954, CCDS76227

Canonical transcript exons

ENST00000360472 — 4 exons

ExonStartEnd
ENSE00000000360160213422160215372
ENSE00001446275160205384160205522
ENSE00003599401160213110160213265
ENSE00003662425160211543160211716

Expression profiles

Bgee: expression breadth ubiquitous, 295 present calls, max score 99.86.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 158.8228 / max 2333.7886, expressed in 1822 samples.

FANTOM5 promoters (13 alternative TSS)

Promoter IDTPM avgSamples expressed
6077105.86391814
607532.66031786
60767.81541641
60945.00421430
60782.97701366
60802.1207961
60960.6299310
60920.5255252
60990.3110113
60980.262099

Top tissues by expression

295 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
dorsal motor nucleus of vagus nerveUBERON:000287099.86gold quality
medulla oblongataUBERON:000189699.85gold quality
subthalamic nucleusUBERON:000190699.85gold quality
spinal cordUBERON:000224099.85gold quality
C1 segment of cervical spinal cordUBERON:000646999.85gold quality
inferior vagus X ganglionUBERON:000536399.84gold quality
globus pallidusUBERON:000187599.83gold quality
medial globus pallidusUBERON:000247799.83gold quality
superior vestibular nucleusUBERON:000722799.83gold quality
substantia nigra pars reticulataUBERON:000196699.82gold quality
inferior olivary complexUBERON:000212799.82gold quality
lateral globus pallidusUBERON:000247699.82gold quality
ventricular zoneUBERON:000305399.81gold quality
ventral tegmental areaUBERON:000269199.78gold quality
substantia nigra pars compactaUBERON:000196599.77gold quality
olfactory bulbUBERON:000226499.77gold quality
middle frontal gyrusUBERON:000270299.76gold quality
dorsal plus ventral thalamusUBERON:000189799.75gold quality
amygdalaUBERON:000187699.71gold quality
hypothalamusUBERON:000189899.70gold quality
ponsUBERON:000098899.68gold quality
temporal lobeUBERON:000187199.68gold quality
nucleus accumbensUBERON:000188299.67gold quality
midbrainUBERON:000189199.66gold quality
lateral nuclear group of thalamusUBERON:000273699.66gold quality
cranial nerve IIUBERON:000094199.65gold quality
entorhinal cortexUBERON:000272899.65gold quality
substantia nigraUBERON:000203899.64gold quality
ganglionic eminenceUBERON:000402399.63gold quality
caudate nucleusUBERON:000187399.59gold quality

Single-cell (SCXA)

Detected in 6 experiment(s), a significant marker in 6.

ExperimentMarker?Max mean expression
E-MTAB-8894yes1065.96
E-GEOD-93593yes672.92
E-HCAD-5yes43.30
E-CURD-122yes21.64
E-MTAB-5061yes6.12
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AP1, HNF4A, JUN, NR2F2, PPARG, RUNX3

miRNA regulators (miRDB)

126 targeting PEA15, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-7110-3P100.0073.182486
HSA-MIR-5193100.0067.261744
HSA-MIR-6867-5P100.0082.213464
HSA-MIR-1277-5P100.0073.955056
HSA-MIR-8485100.0077.574731
HSA-MIR-6873-3P100.0071.422626
HSA-MIR-4747-5P100.0067.902681
HSA-MIR-4533100.0069.482758
HSA-MIR-4481100.0066.421669
HSA-MIR-5196-5P100.0067.982761
HSA-MIR-34A-5P99.9971.211784
HSA-MIR-449A99.9971.051776
HSA-MIR-118499.9968.191458
HSA-MIR-150-5P99.9966.691976
HSA-MIR-34C-5P99.9770.451577
HSA-MIR-449B-5P99.9770.261580
HSA-MIR-391099.9571.132227
HSA-MIR-651-3P99.9473.485177
HSA-MIR-6721-5P99.9368.922981
HSA-MIR-124-3P99.8973.743043
HSA-MIR-506-3P99.8973.553057
HSA-MIR-391999.8769.452489
HSA-MIR-394199.8670.542735
HSA-MIR-6875-3P99.8270.262983
HSA-MIR-6756-5P99.8267.972466
HSA-MIR-4760-5P99.8069.881619
HSA-MIR-6817-3P99.7968.352126
HSA-MIR-4713-5P99.7867.801794
HSA-MIR-92A-2-5P99.7567.012164
HSA-MIR-3680-3P99.7572.513095

Literature-anchored findings (GeneRIF, showing 40)

  • role of mitogen-activated protein kinase family members in anti-apoptotic function (PMID:11790785)
  • role in modulating tumor necrosis factor-related apoptosis-inducing ligand-induced death-inducing signaling complex (PMID:11976344)
  • interaction with p90 ribosomal S6 kinase isoenzyme regulates its activity (PMID:12796492)
  • phosphorylation by Akt regulates the antiapoptotic function of PED/PEA-15 at least in part by controlling the stability of PED/PEA-15 (PMID:12808093)
  • apoptosis following Omi/HtrA2 mitochondrial release is mediated by reduction in ped/pea-15 cellular levels (PMID:15328349)
  • PEA-15 is inhibited by adenovirus E1A and has a role in ERK nuclear export and Ras-induced senescence (PMID:15331596)
  • The mechanism controlling PEA-15 binding to ERK/MAPK or FADD, and its subsequent role in cell proliferation and apoptosis is reported. (PMID:15916534)
  • Raised expression of the antiapoptotic protein pea-15 increases susceptibility to chemically induced skin tumor development (PMID:16044159)
  • Human breast cancer cells express high levels of PED and that AKT activity regulates PED protein levels. AKT-dependent increase of PED expression levels represents a key molecular mechanism for chemoresistance in breast cancer. (PMID:16061647)
  • cytoplasmic sequestration of the activated form of ERK by PEA15 enables the action of E1A in ovarian neoplasms (PMID:16170361)
  • Akt overactivation prevents the nuclear translocation of ERK1/2 and the AngII-induced proliferation through interaction with and stabilization of endogenous PEA-15. (PMID:16822839)
  • These data reveal a new function for PEA-15 in the inhibitory control of astrocyte motility through a PKC delta-dependent pathway involving the constitutive expression of a catalytic fragment of PKC delta. (PMID:16987961)
  • PEA15 overexpression represents a common defect in first degree relatives of patients with type 2 diabetes and is correlated with reduced insulin sensitivity in these individuals. (PMID:17021921)
  • TPA increases PED/PEA-15 expression at the post-translational level by inducing phosphorylation at serine 116 and preventing ubiquitinylation and proteosomal degradation (PMID:17227770)
  • In addition to sequestering protein kinases ERK1/2 in the cytoplasm, PEA-15 has the potential to modulate the activity of ERK2 in cells by competing directly with proteins that contain D-recruitment sites. (PMID:17658892)
  • Elevated PEA-15 levels provide a survival advantage for glioblastoma cells confronted with a poor microenvironment and low glucose levels. (PMID:17700518)
  • PEA-15 functions as a scaffold to enhance extracellular signal-regulated MAP kinase (ERK) activation of ribosomal S6 kinase polypeptide RSK2, an activity that is regulated by phosphorylation. (PMID:18077417)
  • transfection with PED siRNA, but not with cFLIP siRNA, sensitized NSCLC cells to TRAIL-induced cell death (PMID:18284607)
  • COUP-TFII antagonizes the repression of the PED/PEA-15 gene by HNF-4alpha. (PMID:18765665)
  • PEA-15 expression is an important prognostic marker in ovarian cancer. (PMID:19010903)
  • PTEN influences Fas signaling, at least in part, by regulating PEA-15 phosphorylation and activity that, in turn, regulate the ability of Bcl-2 to suppress Fas-induced apoptosis. (PMID:19103758)
  • Vitamin D3 signalling in the brain enhances the function of phosphoprotein enriched in astrocytes–15 kD (PEA-15) (PMID:19382910)
  • Strategies are being devised to target key signaling events in PED/PEA-15 action aimed at improving glucose tolerance and at facilitating cancer cell death. (PMID:19531639)
  • Results suggest that PEA-15 expression is likely to be associated with the tumorigenesis of alignant pleural mesothelioma. (PMID:19771552)
  • Data show that PEA-15 prevents ERK1/2 localization to the plasma membrane, thereby inhibiting ERK1/2-dependent threonine phosphorylation of FRS2alpha to promote activation of the ERK1/2 MAP kinase pathway. (PMID:20032303)
  • The results show that HNF-4alpha serves as a scaffold protein for histone deacetylase activities, thereby inhibiting liver expression of genes including PED. (PMID:20396999)
  • PED/PEA-15 modulates Coxsackievirus-adenovirus receptor expression and adenoviral entry, by sequestering ERK1/2. (PMID:20406097)
  • PEA-15 promotes autophagy in glioma cells in a JNK-dependent manner (PMID:20452983)
  • There was no significant difference in the frequency of three marker haplotype in the PEA15 gene in patient with schizophrenia. (PMID:20537721)
  • Data show that PED and Rac1 interact and that this interaction modulates cell migration/invasion processes in cancer cells through ERK1/2 pathway. (PMID:20648624)
  • provide molecular basis of the PED/PEA-15 functional interactions and detailed surface for the design and development of PED/PEA-15 binders (PMID:20825483)
  • The expressions of PED/PEA-15 and XIAP are elevated in hepatocellular carcinoma as compared with adjacent tissues and normal tissues. (PMID:20979872)
  • The protective effect of melatonin is likely mediated, in part, by inhibition of peroxynitrate-mediated nitrosative stress, which in turn relieves imbalance of mitochondrial HtrA2-PED signaling and endothelial cell death. (PMID:21198825)
  • The 67 kD laminin receptor is a novel PED/PEA-15 interacting protein. PED/PEA-15 overexpression increases 67LR-mediated cell adhesion and migration to laminin and extracellular matrix invasion. (PMID:21895963)
  • Data show that knockdown of PEA-15 expression resulted in reversal of selumetinib-sensitive cells to resistant cells, implying that PEA-15 contributes to selumetinib sensitivity. (PMID:22144664)
  • PEA15 impairs cell migration and correlates with clinical features predicting good prognosis in neuroblastoma (PMID:22213050)
  • The article hypothesizes that only unphosphorylated PEA-15 can act as a tumor-suppressor and that phosphorylation alters the interaction with binding partners to promote tumor development. (PMID:22694972)
  • the solution death effector domain (DED) structure of the PED/PEA-15 protein, a representative member of DED subfamily, using traditional NMR restraints with the addition of residual dipolar coupling restraints was refined. (PMID:22732408)
  • NMR chemical shift perturbation and backbone dynamic studies at the fast ps-ns timescale of PED/PEA-15, in its free form and in the complex with ERK2. (PMID:22820249)
  • study demonstrates that the PEA-15 protein decreases proliferation, clonogenicity, and invasiveness, but increases resistance to apoptosis in colorectal carcinoma cells (PMID:23481023)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_reriopea15ENSDARG00000079771
mus_musculusPea15aENSMUSG00000013698
rattus_norvegicusPea15ENSRNOG00000046996

Protein

Protein identifiers

Astrocytic phosphoprotein PEA-15Q15121 (reviewed: Q15121)

Alternative names: 15 kDa phosphoprotein enriched in astrocytes, Phosphoprotein enriched in diabetes

All UniProt accessions (3): B1AKZ4, B1AKZ5, Q15121

UniProt curated annotations — full annotation on UniProt →

Function. Blocks Ras-mediated inhibition of integrin activation and modulates the ERK MAP kinase cascade. Inhibits RPS6KA3 activities by retaining it in the cytoplasm. Inhibits both TNFRSF6- and TNFRSF1A-mediated CASP8 activity and apoptosis. Regulates glucose transport by controlling both the content of SLC2A1 glucose transporters on the plasma membrane and the insulin-dependent trafficking of SLC2A4 from the cell interior to the surface.

Subunit / interactions. Binds RPS6KA3, MAPK3 and MAPK1. Transient interaction with PLD1 and PLD2. Interacts with CASP8 and FADD.

Subcellular location. Cytoplasm.

Tissue specificity. Ubiquitously expressed. Most abundant in tissues such as heart, brain, muscle and adipose tissue which utilize glucose as an energy source. Lower expression in glucose-producing tissues. Higher levels of expression are found in tissues from individuals with type 2 diabetes than in controls.

Post-translational modifications. Phosphorylated by protein kinase C and calcium-calmodulin-dependent protein kinase. These phosphorylation events are modulated by neurotransmitters or hormones.

Isoforms (2)

UniProt IDNamesCanonical?
Q15121-11yes
Q15121-22

RefSeq proteins (4): NP_001284505, NP_001284506, NP_001284507, NP_003759* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR001875DED_domDomain
IPR011029DEATH-like_dom_sfHomologous_superfamily
IPR029546PEA15_DEDDomain

Pfam: PF01335

UniProt features (20 total): helix 6, sequence conflict 4, modified residue 4, region of interest 2, chain 1, domain 1, turn 1, splice variant 1

Structure

Experimental structures (PDB)

4 structures.

PDBMethodResolution (Å)
4IZAX-RAY DIFFRACTION1.93
4IZ5X-RAY DIFFRACTION3.19
6P6BSOLUTION NMR
6P6CSOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q15121-F178.010.28

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (4): 61, 90, 104, 116

Function

Pathways and Gene Ontology

Reactome pathways

2 pathways

IDPathway
R-HSA-112409RAF-independent MAPK1/3 activation
R-HSA-5673001RAF/MAP kinase cascade

MSigDB gene sets: 324 (showing top): GOBP_NEGATIVE_REGULATION_OF_TRANSMEMBRANE_TRANSPORT, AP1_01, GOBP_CARBOHYDRATE_TRANSPORT, ENK_UV_RESPONSE_KERATINOCYTE_UP, GOBP_EXTRINSIC_APOPTOTIC_SIGNALING_PATHWAY, RIZKI_TUMOR_INVASIVENESS_3D_DN, PATIL_LIVER_CANCER, CHANG_IMMORTALIZED_BY_HPV31_DN, MARTORIATI_MDM4_TARGETS_NEUROEPITHELIUM_DN, GOBP_NEGATIVE_REGULATION_OF_EXTRINSIC_APOPTOTIC_SIGNALING_PATHWAY, CAIRO_HEPATOBLASTOMA_CLASSES_DN, GOBP_REGULATION_OF_EXTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_VIA_DEATH_DOMAIN_RECEPTORS, GERY_CEBP_TARGETS, GOBP_NEGATIVE_REGULATION_OF_TRANSPORT, AP1_Q4_01

GO Biological Process (6): MAPK cascade (GO:0000165), apoptotic process (GO:0006915), negative regulation of D-glucose import across plasma membrane (GO:0046325), negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (GO:1902042), positive regulation of extrinsic apoptotic signaling pathway via death domain receptors (GO:1902043), regulation of apoptotic process (GO:0042981)

GO Molecular Function (1): protein binding (GO:0005515)

GO Cellular Component (4): nucleoplasm (GO:0005654), cytosol (GO:0005829), microtubule associated complex (GO:0005875), cytoplasm (GO:0005737)

Reactome top-level categories

Rollup of top-1 pathways:

CategoryPathways
MAPK1/MAPK3 signaling2

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure3
extrinsic apoptotic signaling pathway via death domain receptors2
regulation of extrinsic apoptotic signaling pathway via death domain receptors2
intracellular signaling cassette1
programmed cell death1
apoptotic signaling pathway1
execution phase of apoptosis1
negative regulation of D-glucose transmembrane transport1
regulation of D-glucose import across plasma membrane1
D-glucose import across plasma membrane1
negative regulation of extrinsic apoptotic signaling pathway1
positive regulation of extrinsic apoptotic signaling pathway1
apoptotic process1
regulation of programmed cell death1
binding1
nuclear lumen1
cytoplasm1
microtubule cytoskeleton1
protein-containing complex1
intracellular anatomical structure1

Protein interactions and networks

STRING

1008 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
PEA15FADDQ13158921
PEA15MAPK1P28482781
PEA15PLD1Q13393731
PEA15RPS6KA3P51812721
PEA15MAPK3P27361687
PEA15RRASP10301627
PEA15CASP8Q14790597
PEA15SLC2A4P14672496
PEA15SLC2A1P11166495
PEA15DEDDO75618453
PEA15CFLARO15519432
PEA15CREB1P16220422
PEA15PRKD1Q15139412
PEA15ANK3Q12955391
PEA15NME1P15531391

IntAct

38 interactions, top by confidence:

ABTypeScore
MAPK1PEA15psi-mi:“MI:0915”(physical association)0.900
PEA15MAPK1psi-mi:“MI:0407”(direct interaction)0.900
PEA15MAPK1psi-mi:“MI:0914”(association)0.900
MAPK1PEA15psi-mi:“MI:0407”(direct interaction)0.900
PEA15MAPK1psi-mi:“MI:0915”(physical association)0.900
MAPK3PEA15psi-mi:“MI:0915”(physical association)0.740
PEA15MAPK3psi-mi:“MI:0915”(physical association)0.740
SNRNP27UBA6psi-mi:“MI:0914”(association)0.530
TERF2IPPEA15psi-mi:“MI:0915”(physical association)0.510
PEA15SMYD5psi-mi:“MI:0915”(physical association)0.400
PEA15BCAT2psi-mi:“MI:0915”(physical association)0.400
DENRpsi-mi:“MI:0915”(physical association)0.400
AGPSpsi-mi:“MI:0915”(physical association)0.400
PEA15PDPK1psi-mi:“MI:0915”(physical association)0.370
IQCB1PCP4L1psi-mi:“MI:0914”(association)0.350
MAPTSHTN1psi-mi:“MI:0914”(association)0.350
PEA15CLASP2psi-mi:“MI:0914”(association)0.350
OSTNPEA15psi-mi:“MI:0914”(association)0.350
FBF1CCDC85Cpsi-mi:“MI:2364”(proximity)0.270
STILERVK3-1psi-mi:“MI:2364”(proximity)0.270
CEP170ERVK3-1psi-mi:“MI:2364”(proximity)0.270
TERF2IPPEA15psi-mi:“MI:0915”(physical association)0.000
MAPK1PEA15psi-mi:“MI:0915”(physical association)0.000

BioGRID (108): PEA15 (Proximity Label-MS), PEA15 (Proximity Label-MS), PEA15 (Proximity Label-MS), PEA15 (Affinity Capture-RNA), ATP1B3 (Two-hybrid), TRAPPC13 (Two-hybrid), CACYBP (Two-hybrid), CEP120 (Two-hybrid), COPS5 (Two-hybrid), DNAJB1 (Two-hybrid), DYRK1A (Two-hybrid), FAM103A1 (Two-hybrid), KLHL12 (Two-hybrid), MTIF3 (Two-hybrid), OSBPL1A (Two-hybrid)

ESM2 similar proteins: A6QLE5, B0FPE9, D4A523, O08736, O14862, O35732, O62640, O77736, O89110, O95786, P25445, P29452, P43527, P55865, P55867, P57730, P70343, Q13158, Q14790, Q15121, Q153Z0, Q504J1, Q5R529, Q5RAV7, Q5U318, Q61160, Q62048, Q63199, Q645M6, Q6GZR1, Q6Q899, Q7RTR0, Q8HXK9, Q8IXQ6, Q8R4B8, Q8WXC3, Q91VJ1, Q920D5, Q92851, Q96P20

Diamond homologs: Q15121, Q5R529, Q5U318, Q62048, Q9Z297

SIGNOR signaling

11 interactions.

AEffectBMechanism
AKT1“up-regulates activity”PEA15phosphorylation
PEA15down-regulatesMAPK1
PEA15down-regulatesMAPK3
HTRA2down-regulatesPEA15binding
CAMK2Aup-regulatesPEA15phosphorylation
PRKCAdown-regulatesPEA15phosphorylation
AKT“up-regulates activity”PEA15phosphorylation
RUNX3“down-regulates quantity by repression”PEA15“transcriptional regulation”
PEA15down-regulatesGbeta
PEA15down-regulatesERK1/2
CAMK2GunknownPEA15phosphorylation

Disease & clinical

Clinical variants and AI predictions

ClinVar

13 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance7
Likely benign0
Benign0

Top pathogenic / likely-pathogenic (0)

SpliceAI

739 predictions. Top by Δscore:

VariantEffectΔscore
1:160205451:G:GTdonor_gain1.0000
1:160211527:C:Aacceptor_gain1.0000
1:160211535:A:AGacceptor_gain1.0000
1:160211536:A:Gacceptor_gain1.0000
1:160211537:CCCCA:Cacceptor_loss1.0000
1:160211538:CCCAG:Cacceptor_loss1.0000
1:160211539:CCAGT:Cacceptor_loss1.0000
1:160211540:CAGT:Cacceptor_loss1.0000
1:160211541:A:AGacceptor_gain1.0000
1:160211541:A:Tacceptor_loss1.0000
1:160211542:G:GGacceptor_gain1.0000
1:160211542:GTC:Gacceptor_gain1.0000
1:160211542:GTCAT:Gacceptor_gain1.0000
1:160211629:G:GTdonor_gain1.0000
1:160211649:GA:Gdonor_gain1.0000
1:160211651:G:GGdonor_gain1.0000
1:160211693:A:Tdonor_gain1.0000
1:160213104:CTCCA:Cacceptor_loss1.0000
1:160213105:TCCAG:Tacceptor_loss1.0000
1:160213106:CCAG:Cacceptor_loss1.0000
1:160213107:CAGAC:Cacceptor_loss1.0000
1:160213108:A:ACacceptor_loss1.0000
1:160213108:A:AGacceptor_gain1.0000
1:160213109:G:GAacceptor_gain1.0000
1:160213109:GA:Gacceptor_gain1.0000
1:160213109:GAC:Gacceptor_gain1.0000
1:160213109:GACA:Gacceptor_gain1.0000
1:160213109:GACAA:Gacceptor_gain1.0000
1:160213262:AAAGG:Adonor_loss1.0000
1:160213263:AAGGT:Adonor_loss1.0000

AlphaMissense

862 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
1:160211576:T:CL11P1.000
1:160211603:T:CL20P1.000
1:160211612:T:CL23P1.000
1:160211690:T:CL49P1.000
1:160213151:C:AR72S1.000
1:160213161:T:CL75P1.000
1:160213164:T:CL76P1.000
1:160213259:T:CY108H1.000
1:160211623:T:CC27R0.999
1:160211624:G:AC27Y0.999
1:160211625:C:GC27W0.999
1:160211677:T:AW45R0.999
1:160211677:T:CW45R0.999
1:160211708:T:CL55P0.999
1:160213125:T:AI63N0.999
1:160213129:G:CE64D0.999
1:160213129:G:TE64D0.999
1:160213130:C:GH65D0.999
1:160213131:A:CH65P0.999
1:160213132:C:AH65Q0.999
1:160213132:C:GH65Q0.999
1:160213137:T:CF67S0.999
1:160213139:G:AE68K0.999
1:160213140:A:TE68V0.999
1:160213141:G:CE68D0.999
1:160213141:G:TE68D0.999
1:160213145:T:CS70P0.999
1:160213151:C:GR72G0.999
1:160213152:G:CR72P0.999
1:160213154:C:AP73T0.999

dbSNP variants (sampled 300 via entrez): RS1000028275 (1:160210603 C>A,G), RS1000310062 (1:160209214 C>T), RS1000318267 (1:160203718 G>A), RS1000381176 (1:160215409 T>C), RS1000418349 (1:160203435 C>T), RS1000497076 (1:160214225 G>A), RS1000527044 (1:160207443 C>T), RS1000595428 (1:160208873 G>A,C), RS1001044642 (1:160207734 G>T), RS1001059375 (1:160205449 A>G), RS1001203243 (1:160210167 C>T), RS1001716845 (1:160210482 T>G), RS1002326021 (1:160215751 T>C), RS1002335342 (1:160204027 T>C), RS1002492414 (1:160204349 C>A)

Disease associations

OMIM: gene MIM:603434 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

72 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects expression, decreases methylation, increases expression5
Benzo(a)pyreneincreases expression4
sodium arseniteaffects cotreatment, increases abundance, increases expression3
Acetaminophenincreases expression3
Tobacco Smoke Pollutionincreases expression, affects expression3
Cyclosporinedecreases methylation, increases expression3
bisphenol Fincreases expression, affects cotreatment2
bisphenol Aaffects expression, increases expression2
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression2
Arsenicincreases expression, affects methylation, affects cotreatment, increases abundance2
Cisplatindecreases expression, increases reaction, increases expression2
Phenylmercuric Acetateaffects cotreatment, increases expression2
Tretinoindecreases expression, increases expression2
Aflatoxin B1decreases methylation, increases expression2
FR900359affects phosphorylation1
lead acetateincreases expression1
pyrogallol 1,3-dimethyl etheraffects cotreatment, affects localization, decreases expression1
beta-lapachoneincreases expression1
butyraldehydeincreases expression1
manganese chlorideaffects cotreatment, increases abundance, increases expression1
chloropicrinaffects expression1
AM 251increases expression1
candoxinincreases expression1
ICG 001increases expression1
bisphenol Bincreases expression1
abrineincreases expression1
ON 01910increases expression1
dorsomorphinaffects cotreatment, increases expression1
(4-amino-1,4-dihydro-3-(2-pyridyl)-5-thioxo-1,2,4-triazole)copper(II)increases expression1
eprenetapoptincreases expression, affects reaction1

Cellosaurus cell lines

5 cell lines: 4 cancer cell line, 1 transformed cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_B3DQAbcam HEK293T PEA15 KOTransformed cell lineFemale
CVCL_C4J9SKOV3.ip1 PEA-15-AACancer cell lineFemale
CVCL_C4JASKOV3.ip1 PEA-15-DDCancer cell lineFemale
CVCL_C4JBSKOV3.ip1 PEA-15-WTCancer cell lineFemale
CVCL_D1TXAbcam U-87MG PEA15 KOCancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.