PFKFB4
gene geneOn this page
Summary
PFKFB4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, HGNC:8875) is a protein-coding gene on chromosome 3p21.31, encoding 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 (Q16877). Synthesis and degradation of fructose 2,6-bisphosphate.
The protein encoded by this gene is one of four bifunctional kinase/phosphatases that regulate the concentration of the glycolytic byproduct fructose-2,6-bisphosphate (F2,6BP). The encoded protein is highly expressed in cancer cells and is induced by hypoxia. This protein is essential to the survival of cancer cells under conditions of hypoxia, because it increases the amount of F2,6BP and ATP at a time when the cell cannot produce much of them. This finding suggests that this protein may be a good target for disruption in cancer cells, hopefully imperiling their survival. Several transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 5210 — RefSeq curated summary.
At a glance
- GWAS associations: 15
- Clinical variants (ClinVar): 105 total
- Druggable target: yes
- MANE Select transcript:
NM_004567
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:8875 |
| Approved symbol | PFKFB4 |
| Name | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 |
| Location | 3p21.31 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000114268 |
| Ensembl biotype | protein_coding |
| OMIM | 605320 |
| Entrez | 5210 |
Gene structure
Transcript identifiers
Ensembl transcripts: 21 — 12 protein_coding, 5 protein_coding_CDS_not_defined, 2 nonsense_mediated_decay, 2 retained_intron
ENST00000232375, ENST00000383734, ENST00000412035, ENST00000416568, ENST00000417753, ENST00000422701, ENST00000445633, ENST00000452531, ENST00000467176, ENST00000468162, ENST00000471890, ENST00000478516, ENST00000490115, ENST00000490404, ENST00000496767, ENST00000877351, ENST00000919611, ENST00000919612, ENST00000919613, ENST00000919614, ENST00000956232
RefSeq mRNA: 6 — MANE Select: NM_004567
NM_001317134, NM_001317135, NM_001317136, NM_001317137, NM_001317138, NM_004567
CCDS: CCDS2771, CCDS82769, CCDS82770
Canonical transcript exons
ENST00000232375 — 14 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000877764 | 48517684 | 48519806 |
| ENSE00003461116 | 48523701 | 48523830 |
| ENSE00003467502 | 48521986 | 48522050 |
| ENSE00003485285 | 48525565 | 48525669 |
| ENSE00003492773 | 48539254 | 48539310 |
| ENSE00003536598 | 48523537 | 48523599 |
| ENSE00003550564 | 48538498 | 48538619 |
| ENSE00003563432 | 48550118 | 48550234 |
| ENSE00003583026 | 48536256 | 48536463 |
| ENSE00003583488 | 48549864 | 48549960 |
| ENSE00003630298 | 48539697 | 48539771 |
| ENSE00003784213 | 48543580 | 48543646 |
| ENSE00003787736 | 48535512 | 48535658 |
| ENSE00003843529 | 48556681 | 48556803 |
Expression profiles
Bgee: expression breadth ubiquitous, 182 present calls, max score 91.74.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 7.2313 / max 111.1987, expressed in 1528 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 42143 | 3.8909 | 1105 |
| 42144 | 2.7653 | 1162 |
| 42145 | 0.5021 | 276 |
| 42141 | 0.0731 | 24 |
Top tissues by expression
284 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| blood | UBERON:0000178 | 91.74 | gold quality |
| monocyte | CL:0000576 | 90.02 | gold quality |
| mononuclear cell | CL:0000842 | 89.88 | gold quality |
| leukocyte | CL:0000738 | 89.57 | gold quality |
| right testis | UBERON:0004534 | 89.42 | gold quality |
| left testis | UBERON:0004533 | 89.28 | gold quality |
| stromal cell of endometrium | CL:0002255 | 88.20 | gold quality |
| testis | UBERON:0000473 | 87.25 | gold quality |
| granulocyte | CL:0000094 | 86.99 | gold quality |
| jejunal mucosa | UBERON:0000399 | 86.78 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 83.41 | gold quality |
| duodenum | UBERON:0002114 | 83.37 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 83.35 | gold quality |
| body of pancreas | UBERON:0001150 | 82.06 | gold quality |
| cortical plate | UBERON:0005343 | 81.31 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 81.08 | gold quality |
| jejunum | UBERON:0002115 | 80.95 | gold quality |
| triceps brachii | UBERON:0001509 | 80.93 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 80.92 | gold quality |
| gluteal muscle | UBERON:0002000 | 80.50 | gold quality |
| ventricular zone | UBERON:0003053 | 80.07 | gold quality |
| pancreas | UBERON:0001264 | 79.56 | gold quality |
| islet of Langerhans | UBERON:0000006 | 79.45 | gold quality |
| small intestine | UBERON:0002108 | 79.41 | gold quality |
| spleen | UBERON:0002106 | 79.24 | gold quality |
| ganglionic eminence | UBERON:0004023 | 79.12 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 78.97 | gold quality |
| vena cava | UBERON:0004087 | 78.03 | gold quality |
| superficial temporal artery | UBERON:0001614 | 77.61 | gold quality |
| bone marrow | UBERON:0002371 | 77.45 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 3.40 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): HIF1A
miRNA regulators (miRDB)
75 targeting PFKFB4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-4645-5P | 99.98 | 65.81 | 1284 |
| HSA-MIR-4487 | 99.96 | 64.58 | 1252 |
| HSA-MIR-128-3P | 99.95 | 71.17 | 2484 |
| HSA-MIR-216A-3P | 99.95 | 71.19 | 2505 |
| HSA-MIR-23A-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23B-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-9718 | 99.94 | 68.91 | 918 |
| HSA-MIR-15A-5P | 99.90 | 72.80 | 2787 |
| HSA-MIR-15B-5P | 99.90 | 72.78 | 2798 |
| HSA-MIR-16-5P | 99.90 | 72.80 | 2780 |
| HSA-MIR-195-5P | 99.90 | 72.81 | 2805 |
| HSA-MIR-3681-3P | 99.88 | 70.46 | 2254 |
| HSA-MIR-4492 | 99.87 | 68.25 | 3611 |
| HSA-MIR-518A-5P | 99.70 | 69.01 | 2209 |
| HSA-MIR-527 | 99.70 | 69.01 | 2209 |
| HSA-MIR-3660 | 99.68 | 67.33 | 1149 |
| HSA-MIR-4526 | 99.68 | 67.07 | 1136 |
| HSA-MIR-3158-5P | 99.65 | 67.51 | 1763 |
| HSA-MIR-4666B | 99.64 | 68.69 | 1282 |
| HSA-MIR-762 | 99.58 | 66.61 | 1994 |
| HSA-MIR-4672 | 99.50 | 71.58 | 2893 |
| HSA-MIR-5589-3P | 99.29 | 68.30 | 1443 |
| HSA-MIR-149-5P | 99.25 | 67.16 | 1315 |
| HSA-MIR-4727-5P | 99.23 | 67.55 | 1154 |
| HSA-MIR-505-3P | 99.19 | 69.71 | 896 |
Literature-anchored findings (GeneRIF, showing 40)
- Mechanisms of hypoxic regulation of PFKFB4 gene expression were studied in several cancer cell lines. (PMID:15474002)
- A detailed analysis of the 5’-flanking region of human gene pfkfb4 using different 5’-deletion promoter constructs was carried out; this gene is activated by serum and chemical hypoxia whereas beta-estradiol decreases its expression. (PMID:15642344)
- Overexpression of PFKFB-4 transcript levels in breast & colon malignant tumors correlates with enhanced expression of PFKFB-3, hypoxia-inducible factor(HIF)-1alpha & known HIF-1 dependent genes Glut1 & VEGF (PMID:15925437)
- PFKFB-4 and PFKFB-3 genes are expressed in gastric and pancreatic cancer cells, they strongly respond to hypoxia via a HIF-1alpha dependent mechanism and possibly have a significant role in the Warburg effect which is found in malignant cells (PMID:17143338)
- PFKFB4 has an important role in the progression of non-muscle-invasive bladder cancer ( (PMID:21396842)
- Sulforaphane is a potent inducer of apoptosis in hepatocellular carcinoma cells via PFKFB4-inhibition pathways. (PMID:21640852)
- an essential role of PFKFB4 in the maintenance of brain cancer stem-like cells (PMID:22056879)
- we found that the glycolytic enzyme PFKFB4 is essential for prostate cancer cell survival by maintaining the balance between the use of glucose for energy generation and the synthesis of antioxidants. (PMID:22576210)
- Data suggest that molecular mechanism by which dihydrotestosterone induces Pfkfb4 (and thus glycolysis) during spermatogenesis involves stimulation of Sertoli cells to secrete FGF-2 (fibroblast growth factor 2); study uses recombinant human Pfkfb4. (PMID:22811469)
- PFKFB4 and HO-2 are expressed in a coordinated manner to maintain glucose homeostasis. (PMID:22892400)
- Data indicate that the PFKFB4 expressed in multiple transformed cells and tumors functions to synthesize F2,6BP. (PMID:25115398)
- PFKFB4 suppresses oxidative stress and p62 accumulation, without which autophagy is stimulated likely as a ROS detoxification response. (PMID:25772235)
- Inhibition of PFKFB4 suppresses glycolysis and proliferation of multiple human cancer cell lines. (PMID:26221874)
- HIF-1alpha transactivates hypoxia-responsive elements (HRE)-D of the promoter region of PFKFB4 in hypoxia condition. (PMID:27181362)
- The expression of PFKFB3, PFKFB4, NAMPT, and TSPAN13 is strongly up-regulated in pediatric glioma. (PMID:27491149)
- Our FD models could facilitate a better mechanistic understanding of FD and help develop effective therapeutics for FD and other fibrosis diseases. (PMID:27614159)
- Data show that PFKFB4 is the target gene of PPARgamma which modulates the transcriptional activity of its promoter. (PMID:27769068)
- High PFKFB4 expression is associated with colon and lung cancer. (PMID:28092678)
- This work has uncovered a novel function of the enzymes PFKFB3 and PFKFB4 in ovarian cancer cells during mitotic arrest (PMID:28152500)
- Epithelial and endothelial tyrosine kinase (Etk) interacts with 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (PFKFB4) to promote small-cell lung cancer (SCLC) chemoresistance through regulation of autophagy. (PMID:29208667)
- findings suggest that the Warburg pathway enzyme PFKFB4 acts as a molecular fulcrum that couples sugar metabolism to transcriptional activation by stimulating SRC-3 to promote aggressive metastatic tumours (PMID:29615789)
- PFKFB4 enhances the invasiveness of breast cancer cells in vitro and in vivo by inducing HA production and PFKFB4-induced expression of HAS2 depends upon the activation of p38 signaling. (PMID:30415245)
- Currently available anti-melanoma therapeutic strategies may significantly benefit from agents targeting PFKFB4 activity. (PMID:30504385)
- CD44ICD interacts with CREB and binds to the promoter region of PFKFB4, thereby regulating PFKFB4 transcription and expression. (PMID:30613295)
- This study aims to characterise the expression and phosphorylation of isozymes of the key glycolytic regulatory protein, 6-phosphofructokinase-2-kinase/fructose-2,6-bisphosphatase (PFK-2/FBPase-2), in urinary exosomes of subjects with pre-eclampsia . (PMID:30819197)
- PFKFB4 is critical for the survival of acute monocytic leukemia cells. (PMID:32299611)
- PFKFB4 promotes lung adenocarcinoma progression via phosphorylating and activating transcriptional coactivator SRC-2. (PMID:33593309)
- PFKFB4 Overexpression Facilitates Proliferation by Promoting the G1/S Transition and Is Associated with a Poor Prognosis in Triple-Negative Breast Cancer. (PMID:34211613)
- Relocation of phosphofructokinases within epithelial cells is a novel event preceding breast cancer recurrence that accurately predicts patient outcomes. (PMID:34348486)
- Expression of Alternative Splice Variants of 6-Phosphofructo-2-kinase/Fructose-2,6-bisphosphatase-4 in Normoxic and Hypoxic Melanoma Cells. (PMID:34445551)
- PFKFB4 is overexpressed in clear-cell renal cell carcinoma promoting pentose phosphate pathway that mediates Sunitinib resistance. (PMID:34593007)
- Loss of PFKFB4 induces cell cycle arrest and glucose metabolism inhibition by inactivating MEK/ERK/c-Myc pathway in cervical cancer cells. (PMID:35659173)
- Hypoxia-inducible CircPFKFB4 Promotes Breast Cancer Progression by Facilitating the CRL4(DDB2) E3 Ubiquitin Ligase-mediated p27 Degradation. (PMID:35813480)
- PFKFB4 interacts with ICMT and activates RAS/AKT signaling-dependent cell migration in melanoma. (PMID:35914811)
- PFKFB4 modulated by miR-195-5p can boost the malignant progression of cervical cancer cells. (PMID:35926796)
- Phosphorylation of PFKFB4 by PIM2 promotes anaerobic glycolysis and cell proliferation in endometriosis. (PMID:36109523)
- PFKFB4 Drives the Oncogenicity in TP53-Mutated Hepatocellular Carcinoma in a Phosphatase-Dependent Manner. (PMID:36806581)
- PFKFB4 Is a Metabolic Driver of HCC Progression and Chemoresistance Through ROS Mitigation. (PMID:36963434)
- THOC3 interacts with YBX1 to promote lung squamous cell carcinoma progression through PFKFB4 mRNA modification. (PMID:37500615)
- Transforming growth factor beta1 upregulates 6-phosphofructo-2-kinase/fructose 2,6-bisphosphatase-4 expression in A549 and MCF-10A cells. (PMID:37707291)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | pfkfb4b | ENSDARG00000029075 |
| danio_rerio | pfkfb4a | ENSDARG00000055540 |
| mus_musculus | Pfkfb4 | ENSMUSG00000025648 |
| rattus_norvegicus | Pfkfb4 | ENSRNOG00000020656 |
| drosophila_melanogaster | Pfrx | FBGN0027621 |
| caenorhabditis_elegans | WBGENE00019295 | |
| caenorhabditis_elegans | pfkb-1.1 | WBGENE00022456 |
Paralogs (3): PFKFB2 (ENSG00000123836), PFKFB1 (ENSG00000158571), PFKFB3 (ENSG00000170525)
Protein
Protein identifiers
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 — Q16877 (reviewed: Q16877)
Alternative names: 6PF-2-K/Fru-2,6-P2ase testis-type isozyme
All UniProt accessions (7): C9JJ23, C9JX77, C9K0D8, Q16877, F8WC12, F8WDY1, Q66S35
UniProt curated annotations — full annotation on UniProt →
Function. Synthesis and degradation of fructose 2,6-bisphosphate.
Subunit / interactions. Homodimer.
Activity regulation. The most important regulatory mechanism of these opposing activities is by phosphorylation and dephosphorylation of the enzyme.
Similarity. In the C-terminal section; belongs to the phosphoglycerate mutase family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q16877-1 | 1 | yes |
| Q16877-2 | 2 | |
| Q16877-3 | 3 |
RefSeq proteins (6): NP_001304063, NP_001304064, NP_001304065, NP_001304066, NP_001304067, NP_004558* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001345 | PG/BPGM_mutase_AS | Active_site |
| IPR003094 | 6Pfruct_kin | Family |
| IPR013078 | His_Pase_superF_clade-1 | Family |
| IPR013079 | 6Phosfructo_kin | Domain |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
| IPR029033 | His_PPase_superfam | Homologous_superfamily |
Pfam: PF00300, PF01591
Enzyme classification (BRENDA):
- EC 2.7.1.105 — 6-phosphofructo-2-kinase (BRENDA: 25 organisms, 68 substrates, 145 inhibitors, 158 Km, 41 kcat entries)
- EC 3.1.3.46 — fructose-2,6-bisphosphate 2-phosphatase (BRENDA: 28 organisms, 27 substrates, 93 inhibitors, 21 Km, 1 kcat entries)
Substrate kinetics (BRENDA)
16 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| BETA-D-FRUCTOSE 6-PHOSPHATE | 0.0038–39 | 63 |
| ATP | 0.0009–1.62 | 35 |
| MGATP2- | 0.0072–2 | 21 |
| FRUCTOSE 2,6-BISPHOSPHATE | 0.0001–1.4 | 15 |
| D-FRUCTOSE 6-PHOSPHATE | 0.0094–0.1 | 4 |
| BETA-D-FRUCTOSE 2,6-BISPHOSPHATE | 0.0102–0.204 | 3 |
| BETA-D-FRUCTOSE 2,6-BISPHOSPHATE | 0.02–0.21 | 2 |
| CTP | 0.9–2 | 2 |
| GTP | 0.35–1.5 | 2 |
| UTP | 0.78–2.3 | 2 |
| D-PSICOSE 6-PHOSPHATE | 7.4 | 1 |
| D-TAGATOSE 6-PHOSPHATE | 15 | 1 |
| ITP | 0.3 | 1 |
| L-SORBOSE 6-PHOSPHATE | 0.175 | 1 |
| D-FRUCTOSE 2,6-BISPHOSPHATE | 0.0001 | 1 |
Catalyzed reactions (Rhea), 2 shown:
- beta-D-fructose 6-phosphate + ATP = beta-D-fructose 2,6-bisphosphate + ADP + H(+) (RHEA:15653)
- beta-D-fructose 2,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate (RHEA:17289)
UniProt features (34 total): binding site 22, active site 4, region of interest 2, splice variant 2, chain 1, site 1, modified residue 1, sequence variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q16877-F1 | 92.64 | 0.80 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (5): 391 (transition state stabilizer); 129; 159; 257 (tele-phosphohistidine intermediate); 326 (proton donor/acceptor)
Ligand- & substrate-binding residues (22): 131; 137; 168–173; 173; 194; 198; 256; 263; 269; 306; 337; 348–351 …
Post-translational modifications (1): 444
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-9634600 | Regulation of glycolysis by fructose 2,6-bisphosphate metabolism |
MSigDB gene sets: 184 (showing top):
GOBP_NUCLEOSIDE_DIPHOSPHATE_METABOLIC_PROCESS, MODULE_45, MODULE_64, MENSE_HYPOXIA_UP, GOBP_CARBOHYDRATE_DERIVATIVE_CATABOLIC_PROCESS, GOBP_CARBOHYDRATE_PHOSPHORYLATION, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, SHEPARD_BMYB_MORPHOLINO_DN, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS, MODULE_66, GOBP_GENERATION_OF_PRECURSOR_METABOLITES_AND_ENERGY, GOBP_SMALL_MOLECULE_BIOSYNTHETIC_PROCESS, GOBP_MONOSACCHARIDE_BIOSYNTHETIC_PROCESS
GO Biological Process (5): fructose metabolic process (GO:0006000), fructose 2,6-bisphosphate metabolic process (GO:0006003), gluconeogenesis (GO:0006094), glycolytic process (GO:0006096), carbohydrate phosphorylation (GO:0046835)
GO Molecular Function (9): 6-phosphofructo-2-kinase activity (GO:0003873), fructose-2,6-bisphosphate 2-phosphatase activity (GO:0004331), ATP binding (GO:0005524), nucleotide binding (GO:0000166), catalytic activity (GO:0003824), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740), hydrolase activity (GO:0016787)
GO Cellular Component (2): cytosol (GO:0005829), 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex (GO:0043540)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Glycolysis | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| catalytic activity | 2 |
| hexose metabolic process | 1 |
| organophosphate metabolic process | 1 |
| carbohydrate derivative metabolic process | 1 |
| glucose metabolic process | 1 |
| hexose biosynthetic process | 1 |
| phosphoglycerate kinase activity | 1 |
| phosphoglycerate mutase activity | 1 |
| phosphopyruvate hydratase activity | 1 |
| pyruvate kinase activity | 1 |
| pyruvate metabolic process | 1 |
| generation of precursor metabolites and energy | 1 |
| aerobic respiration | 1 |
| carbohydrate catabolic process | 1 |
| pyridine nucleotide catabolic process | 1 |
| glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity | 1 |
| ADP catabolic process | 1 |
| ATP metabolic process | 1 |
| nicotinamide nucleotide metabolic process | 1 |
| carbohydrate metabolic process | 1 |
| phosphorylation | 1 |
| phosphofructokinase activity | 1 |
| sugar-phosphatase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| molecular_function | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| cytoplasm | 1 |
| cellular anatomical structure | 1 |
| cytosol | 1 |
| transferase complex, transferring phosphorus-containing groups | 1 |
Protein interactions and networks
STRING
1450 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PFKFB4 | TIGAR | Q9NQ88 | 956 |
| PFKFB4 | PFKM | P08237 | 730 |
| PFKFB4 | GCK | P35557 | 726 |
| PFKFB4 | PKM | P14618 | 622 |
| PFKFB4 | FBP2 | O00757 | 602 |
| PFKFB4 | PFKP | Q01813 | 578 |
| PFKFB4 | SLC2A1 | P11166 | 574 |
| PFKFB4 | HK2 | P52789 | 565 |
| PFKFB4 | H6PD | O95479 | 558 |
| PFKFB4 | LDHA | P00338 | 546 |
| PFKFB4 | PFKL | P17858 | 546 |
| PFKFB4 | PGK1 | P00558 | 519 |
| PFKFB4 | SLC2A3 | P11169 | 510 |
| PFKFB4 | TP53 | P04637 | 509 |
| PFKFB4 | HIF1A | Q16665 | 507 |
IntAct
38 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| SMARCB1 | ARID1A | psi-mi:“MI:0914”(association) | 0.860 |
| PFKFB1 | PFKFB4 | psi-mi:“MI:0915”(physical association) | 0.670 |
| YWHAH | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.610 |
| PFKFB4 | LRR1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| PFKFB4 | CCDC102B | psi-mi:“MI:0915”(physical association) | 0.560 |
| PFKFB4 | CDC23 | psi-mi:“MI:0915”(physical association) | 0.560 |
| YWHAQ | IGLC7 | psi-mi:“MI:0914”(association) | 0.530 |
| YWHAZ | BLTP3B | psi-mi:“MI:0914”(association) | 0.530 |
| YWHAB | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.480 |
| PFKFB4 | CSNK2B | psi-mi:“MI:0915”(physical association) | 0.370 |
| GADD45A | PFKFB4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| PFKFB4 | GSK3B | psi-mi:“MI:0915”(physical association) | 0.370 |
| PFKFB3 | PFKFB2 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAB | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAG | C1orf226 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAZ | SPEG | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAE | DEPDC5 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAB | FOXO6 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAG | FOXO6 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAQ | FOXO6 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAH | FOXO6 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAZ | HECTD4 | psi-mi:“MI:0914”(association) | 0.350 |
| PFKFB4 | PFKFB2 | psi-mi:“MI:0914”(association) | 0.350 |
| RRAS | KIN | psi-mi:“MI:0914”(association) | 0.350 |
| SLC2A8 | FOLH1 | psi-mi:“MI:0914”(association) | 0.350 |
| GNG12 | GNAQ | psi-mi:“MI:0914”(association) | 0.350 |
| PFKFB1 | PFKFB4 | psi-mi:“MI:0915”(physical association) | 0.000 |
| LRR1 | PFKFB4 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (58): PFKFB4 (Affinity Capture-RNA), PFKFB4 (Affinity Capture-MS), PFKFB4 (Affinity Capture-RNA), PFKFB4 (Co-localization), PFKFB4 (Co-localization), PFKFB4 (Co-localization), PFKFB4 (Biochemical Activity), PFKFB4 (Negative Genetic), TST (Positive Genetic), PFKFB4 (Positive Genetic), PRKDC (Positive Genetic), PFKFB4 (Two-hybrid), CCDC102B (Two-hybrid), PFKFB1 (Two-hybrid), LRR1 (Two-hybrid)
ESM2 similar proteins: A0A4X1T4U3, A4IFD0, O00329, O14936, O35904, O61069, O65583, O70589, P07953, P16118, P25114, P49872, P70266, Q13057, Q16875, Q16877, Q24210, Q28901, Q298L5, Q2UM43, Q32M07, Q4R3W4, Q4R8B6, Q4V8A1, Q502L7, Q5B5L3, Q5M7G4, Q5R9C1, Q623S8, Q62915, Q68FP8, Q6DGQ8, Q6DTY7, Q6P618, Q80UN9, Q8IMX7, Q8MIR4, Q91309, Q91348, Q91YL3
Diamond homologs: A1AJW4, A1JJB8, A1TC01, A4TQH5, A4W6B3, A5VVV5, A6TI09, A6UEW3, A6WYJ2, A7FMF8, A7HZ35, A7MIJ0, A7ZVT7, A8A8C4, A8ALW1, A8G9J4, A8IGZ9, A9IXE7, A9MCX8, A9MR94, A9N7F5, A9R032, A9WW62, B0UBD4, B1IS24, B1JL20, B1LEK2, B1XFK5, B2K3K5, B2SC37, B2TZS8, B2VH13, B4EY52, B4T4I9, B4TH18, B4TU55, B5BAL1, B5F543, B5FTD9, B5R3B7
SIGNOR signaling
5 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PFKFB4 | “up-regulates quantity” | “beta-D-fructofuranose 2,6-bisphosphate” | “chemical modification” |
| PFKFB4 | “up-regulates activity” | NCOA3 | phosphorylation |
| PFKFB4 | “down-regulates quantity” | “β-D-fructose 6-phosphate” | “chemical modification” |
| PFKFB4 | “down-regulates quantity” | “beta-D-fructofuranose 2,6-bisphosphate” | “chemical modification” |
| PFKFB4 | “up-regulates quantity” | “β-D-fructose 6-phosphate” | “chemical modification” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 31 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Activation of BAD and translocation to mitochondria | 6 | 175.7× | 5e-11 |
| Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex | 6 | 155.0× | 6e-11 |
| SARS-CoV-1 targets host intracellular signalling and regulatory pathways | 6 | 155.0× | 6e-11 |
| Activation of BH3-only proteins | 6 | 114.6× | 4e-10 |
| RHO GTPases activate PKNs | 6 | 73.2× | 5e-09 |
| Intrinsic Pathway for Apoptosis | 6 | 67.6× | 8e-09 |
| Transcriptional and post-translational regulation of MITF-M expression and activity | 6 | 41.2× | 1e-07 |
| SARS-CoV-1-host interactions | 6 | 40.5× | 1e-07 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein targeting | 5 | 63.2× | 4e-06 |
| intracellular protein localization | 6 | 21.7× | 2e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
105 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 86 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2609 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:48523600:C:CC | acceptor_gain | 1.0000 |
| 3:48523696:CACA:C | donor_loss | 1.0000 |
| 3:48523697:ACAC:A | donor_loss | 1.0000 |
| 3:48523700:CC:C | donor_loss | 1.0000 |
| 3:48523706:G:GA | donor_gain | 1.0000 |
| 3:48523826:TAGGA:T | acceptor_gain | 1.0000 |
| 3:48523827:AGGA:A | acceptor_gain | 1.0000 |
| 3:48523828:GGA:G | acceptor_gain | 1.0000 |
| 3:48523829:GA:G | acceptor_gain | 1.0000 |
| 3:48523830:ACTGC:A | acceptor_loss | 1.0000 |
| 3:48523831:C:CC | acceptor_gain | 1.0000 |
| 3:48523831:CTG:C | acceptor_loss | 1.0000 |
| 3:48523832:T:G | acceptor_loss | 1.0000 |
| 3:48523834:C:CT | acceptor_gain | 1.0000 |
| 3:48523840:C:CT | acceptor_gain | 1.0000 |
| 3:48525666:CGCC:C | acceptor_gain | 1.0000 |
| 3:48525667:GCCC:G | acceptor_loss | 1.0000 |
| 3:48525669:CCT:C | acceptor_loss | 1.0000 |
| 3:48535659:C:CC | acceptor_gain | 1.0000 |
| 3:48536251:CTGA:C | donor_loss | 1.0000 |
| 3:48536252:TGACC:T | donor_loss | 1.0000 |
| 3:48536253:GAC:G | donor_loss | 1.0000 |
| 3:48536254:ACCTC:A | donor_gain | 1.0000 |
| 3:48536255:CCTCC:C | donor_gain | 1.0000 |
| 3:48536258:C:A | donor_gain | 1.0000 |
| 3:48536277:T:TA | donor_gain | 1.0000 |
| 3:48536459:GGTCC:G | acceptor_gain | 1.0000 |
| 3:48536460:GTCC:G | acceptor_gain | 1.0000 |
| 3:48536461:TCC:T | acceptor_gain | 1.0000 |
| 3:48536462:CC:C | acceptor_gain | 1.0000 |
AlphaMissense
3085 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 3:48523784:A:G | L380P | 1.000 |
| 3:48523817:A:G | L369P | 1.000 |
| 3:48525569:C:T | G363E | 1.000 |
| 3:48525570:C:A | G363W | 1.000 |
| 3:48525570:C:G | G363R | 1.000 |
| 3:48525570:C:T | G363R | 1.000 |
| 3:48525592:C:A | K355N | 1.000 |
| 3:48525592:C:G | K355N | 1.000 |
| 3:48550139:A:G | W65R | 1.000 |
| 3:48550139:A:T | W65R | 1.000 |
| 3:48523554:A:G | L423P | 0.999 |
| 3:48523563:A:T | V420D | 0.999 |
| 3:48523732:G:C | C397W | 0.999 |
| 3:48523737:G:T | R396S | 0.999 |
| 3:48523763:A:G | L387P | 0.999 |
| 3:48523805:A:G | L373P | 0.999 |
| 3:48523807:T:A | R372S | 0.999 |
| 3:48523807:T:G | R372S | 0.999 |
| 3:48523808:C:G | R372T | 0.999 |
| 3:48523820:T:A | D368V | 0.999 |
| 3:48523820:T:C | D368G | 0.999 |
| 3:48523820:T:G | D368A | 0.999 |
| 3:48523821:C:G | D368H | 0.999 |
| 3:48523827:A:G | Y366H | 0.999 |
| 3:48523829:G:A | S365F | 0.999 |
| 3:48523830:A:G | S365P | 0.999 |
| 3:48525569:C:A | G363V | 0.999 |
| 3:48525579:A:C | Y360D | 0.999 |
| 3:48525579:A:G | Y360H | 0.999 |
| 3:48525581:C:G | R359P | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000003120 (3:48551728 A>G), RS1000062596 (3:48546291 C>A,G), RS1000135937 (3:48546181 G>T), RS1000174218 (3:48539048 G>A,C,T), RS1000185587 (3:48546378 T>A), RS1000214043 (3:48545323 G>A), RS1000383518 (3:48532897 T>C), RS1000454030 (3:48526933 T>C), RS1000533228 (3:48527681 CATCTTT>C), RS1000538371 (3:48540637 T>C), RS1000608351 (3:48539224 C>T), RS1000696306 (3:48546751 A>G), RS1000727868 (3:48539223 A>T), RS1000902226 (3:48521604 G>T), RS1000933173 (3:48520960 C>T)
Disease associations
OMIM: gene MIM:605320 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
15 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001725_77 | Inflammatory bowel disease | 1.000000e-47 |
| GCST002548_9 | Ulcerative colitis | 8.000000e-07 |
| GCST004131_23 | Inflammatory bowel disease | 1.000000e-33 |
| GCST004132_17 | Crohn’s disease | 3.000000e-23 |
| GCST004133_11 | Ulcerative colitis | 8.000000e-20 |
| GCST007565_82 | Morning person | 5.000000e-14 |
| GCST008521_9 | Bitter beverage consumption | 8.000000e-06 |
| GCST008550_18 | Mental health study participation (completed survey) | 3.000000e-08 |
| GCST010002_422 | Refractive error | 4.000000e-14 |
| GCST010698_80 | Subcortical volume (min-P) | 3.000000e-24 |
| GCST010699_110 | Brain morphology (min-P) | 4.000000e-08 |
| GCST010701_52 | Cortical surface area (MOSTest) | 1.000000e-16 |
| GCST010702_36 | Subcortical volume (MOSTest) | 1.000000e-10 |
| GCST010703_262 | Brain morphology (MOSTest) | 2.000000e-13 |
| GCST90020027_103 | Waist-hip index | 2.000000e-14 |
EFO canonical traits (5, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008328 | chronotype measurement |
| EFO:0010089 | bitter beverage consumption measurement |
| EFO:0010130 | health study participation |
| EFO:0004346 | neuroimaging measurement |
| EFO:0007788 | BMI-adjusted waist-hip ratio |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL3721311 (SINGLE PROTEIN), CHEMBL3832646 (PROTEIN COMPLEX)
PharmGKB: 1 entry (VIP=true, CPIC=false)
Binding affinities (BindingDB)
100 measured of 100 human assays (100 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 3-[(3-methyl-5-propan-2-yl-1-benzothiophen-2-yl)sulfonylamino]benzoic acid | IC50 | 30 nM | US-9233946: Sulfonamide compounds |
| 2-[(3-methyl-5-propan-2-yl-1-benzothiophen-2-yl)sulfonylamino]-1,3-thiazole-5-carboxylic acid | IC50 | 100 nM | US-9233946: Sulfonamide compounds |
| 5-methyl-N-[3-(2H-tetrazol-5-yl)phenyl]-1-benzothiophene-2-sulfonamide | IC50 | 140 nM | US-9233946: Sulfonamide compounds |
| 5-fluoro-3-methyl-N-[3-(2H-tetrazol-5-yl)phenyl]-1-benzothiophene-2-sulfonamide | IC50 | 170 nM | US-9233946: Sulfonamide compounds |
| 3-[(5-chloro-3-methyl-1-benzothiophen-2-yl)sulfonylamino]benzoic acid | IC50 | 180 nM | US-9233946: Sulfonamide compounds |
| 3-[(5-chloro-3-methyl-1-benzothiophen-2-yl)sulfonylamino]-2-hydroxybenzoic acid | IC50 | 180 nM | US-9233946: Sulfonamide compounds |
| 3-[(7-chloro-3-methyl-1-benzothiophen-2-yl)sulfonylamino]benzoic acid | IC50 | 200 nM | US-9233946: Sulfonamide compounds |
| 2-Hydroxyethyl 4-{[(5’-fluoro-2’-hydroxybiphenyl-3-yl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 200 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Butyl 4-{[(4,5-dichloro-2-thienyl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 200 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 3-phenyl-N-[3-(2H-tetrazol-5-yl)phenyl]benzenesulfonamide | IC50 | 390 nM | US-9233946: Sulfonamide compounds |
| 5-(2-methylsulfanylpyrimidin-4-yl)-N-[3-(2H-tetrazol-5-yl)phenyl]thiophene-2-sulfonamide | IC50 | 420 nM | US-9233946: Sulfonamide compounds |
| 3-[(7-methoxy-3-methyl-1-benzothiophen-2-yl)sulfonylamino]benzoic acid | IC50 | 420 nM | US-9233946: Sulfonamide compounds |
| 5-(4-methylphenyl)-N-[3-(2H-tetrazol-5-yl)phenyl]thiophene-2-sulfonamide | IC50 | 480 nM | US-9233946: Sulfonamide compounds |
| 2,6-dichloro-N-[3-(2H-tetrazol-5-yl)phenyl]-4-(trifluoromethyl)benzenesulfonamide | IC50 | 510 nM | US-9233946: Sulfonamide compounds |
| 5-(2,4-difluorophenyl)-N-[3-(tetrazolidin-5-yl)phenyl]thiophene-2-sulfonamide | IC50 | 600 nM | US-9233946: Sulfonamide compounds |
| 2-(1H-Pyrrol-1-yl)ethyl 4-{[(4,5-dichlorothiophen-2-yl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 600 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 3-Morpholin-4-ylpropyl 4-({[5-chloro-4-(5-fluoro-2-hydroxyphenyl)-2-thienyl]sulfonyl}amino)-2-hydroxybenzoate trifluoroacetate | IC50 | 600 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 5-(2-methoxyphenyl)-N-[3-(2H-tetrazol-5-yl)phenyl]thiophene-2-sulfonamide | IC50 | 660 nM | US-9233946: Sulfonamide compounds |
| 5-(3-chloro-4-fluorophenyl)-N-[3-(2H-tetrazol-5-yl)phenyl]thiophene-2-sulfonamide | IC50 | 660 nM | US-9233946: Sulfonamide compounds |
| 2-Methoxyethyl 4-({[3-(2,3-dihydro-1-benzofuran-5-yl)phenyl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 700 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 5-(2-chlorophenyl)-N-[3-(tetrazolidin-5-yl)phenyl]thiophene-2-sulfonamide | IC50 | 750 nM | US-9233946: Sulfonamide compounds |
| 4-{[(5-Chloro-4-phenyl-2-thienyl)sulfonyl]amino}-2-hydroxybenzoic acid | IC50 | 800 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Benzyl 4-{[(4,5-dichloro-2-thienyl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 800 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 2-Methoxy-1-methylethyl 4-{[(4,5-dichlorothiophen-2-yl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 800 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 3-[(5-Methylisoxazol-3-yl)amino]propyl 4-{[(5’-fluoro-2’-hydroxybiphenyl-3-yl)sulfonyl]amino}-2-hydroxybenzoate trifluoroacetate | IC50 | 800 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 2-Methoxyethyl 4-({[5-chloro-4-(2,3-dihydro-1-benzofuran-5-yl)-2-thienyl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 900 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| General Procedure 9 | IC50 | 1080 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 2-Methoxyethyl 4-({[5-chloro-4-(2-hydroxyphenyl)-2-thienyl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 1200 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 1-Methyl-3-morpholin-4-ylpropyl 4-{[(4,5-dichlorothiophen-2-yl)sulfonyl]amino}-2-hydroxybenzoate)trifluoroacetate | IC50 | 1200 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 2-hydroxy-4-({[(2’-hydroxybiphenyl-4-yl)methyl]sulfonyl}amino)benzoate | IC50 | 1400 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 2-Methoxy-1-(methoxymethyl)ethyl 4-{[(3,5-dichlorophenyl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 1400 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 2-Hydroxyethyl 4-{[(5-chloro-4-phenyl-2-thienyl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 1400 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 2-hydroxy-4-({[3-(piperidin-1-yl)phenyl]sulfonyl}amino)benzoate | IC50 | 1500 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-[(biphenyl-3-ylsulfonyl)amino]-2-hydroxybenzoate | IC50 | 1600 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-({[3-(2,3-dihydro-1-benzofuran-5-yl)-5-(trifluoromethyl)phenyl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 1700 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 4-{[(4-Bromo-2,5-dichlorothiophen-3-yl)sulfonyl]amino}-2-hydroxybenzoic acid | IC50 | 1700 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-({[3-(5-acetyl-2-thienyl)phenyl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 1700 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 1-Benzylpyrrolidin-3-yl 2-hydroxy-4-{[(2,4,5-trichloro-3-thienyl)sulfonyl]amino}benzoate | IC50 | 1800 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 4-bromo-2-fluoro-N-[3-(tetrazolidin-5-yl)phenyl]benzenesulfonamide | IC50 | 1830 nM | US-9233946: Sulfonamide compounds |
| Methyl 4-[(tert-butoxycarbonyl)amino]-2-hydroxybenzoate | IC50 | 1900 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| General Procedure 14 | IC50 | 1900 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-({[5-(2,5-difluorophenyl)thiophen-2-yl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 2000 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-({[5-chloro-4-(5-fluoro-2-hydroxyphenyl)-2-thienyl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 2000 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 2-Methoxy-1-(methoxymethyl)ethyl 4-({[5-chloro-4-(3-fluorophenyl)-2-thienyl]sulfonyl}amino)-2-hydroxybenzoate | IC50 | 2000 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)-2-hydroxybenzoate trifluoroacetate | IC50 | 2100 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-{[(2,5-dichloro-3-thienyl)sulfonyl]amino}-2-hydroxybenzoate | IC50 | 2300 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-[({5-chloro-4-[3-(dimethylcarbamoyl)phenyl]thiophen-2-yl}sulfonyl)amino]-2-hydroxybenzoate | IC50 | 2400 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 2-hydroxy-4-({[4’-(trifluoromethoxy)biphenyl-3-yl]sulfonyl}amino)benzoate | IC50 | 2400 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| Methyl 4-({[4-(3-aminophenyl)-5-chlorothiophen-2-yl]sulfonyl}amino)-2-hydroxybenzoate trifluoroacetate | IC50 | 2800 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
| 3-Morpholin-4-ylpropyl 4-({[4-(1,3-benzodioxol-5-yl)-5-chloro-2-thienyl]sulfonyl}amino)-2-hydroxybenzoate trifluoroacetate | IC50 | 2800 nM | US-9718809: Bisarylsulfonamides useful in the treatment of inflammation and cancer |
ChEMBL bioactivities
53 potent at pChembl≥5 of 55 total, top 35 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.22 | IC50 | 60 | nM | CHEMBL3731843 |
| 7.00 | IC50 | 100 | nM | CHEMBL3731045 |
| 6.89 | IC50 | 130 | nM | CHEMBL3728731 |
| 6.85 | IC50 | 140 | nM | CHEMBL3731894 |
| 6.77 | IC50 | 170 | nM | CHEMBL3731503 |
| 6.75 | IC50 | 180 | nM | CHEMBL3729923 |
| 6.70 | IC50 | 200 | nM | CHEMBL3727732 |
| 6.41 | IC50 | 390 | nM | CHEMBL3729559 |
| 6.38 | IC50 | 420 | nM | CHEMBL3731358 |
| 6.38 | IC50 | 420 | nM | CHEMBL3727631 |
| 6.32 | IC50 | 480 | nM | CHEMBL3732792 |
| 6.30 | IC50 | 500 | nM | CHEMBL3729840 |
| 6.29 | IC50 | 510 | nM | CHEMBL3728448 |
| 6.22 | IC50 | 600 | nM | CHEMBL3729843 |
| 6.18 | IC50 | 660 | nM | CHEMBL3728006 |
| 6.18 | IC50 | 660 | nM | CHEMBL3730654 |
| 6.12 | IC50 | 750 | nM | CHEMBL3728043 |
| 5.92 | IC50 | 1200 | nM | CHEMBL3732576 |
| 5.89 | IC50 | 1300 | nM | CHEMBL3731769 |
| 5.74 | IC50 | 1830 | nM | CHEMBL3727849 |
| 5.64 | IC50 | 2300 | nM | CHEMBL3731843 |
| 5.55 | IC50 | 2800 | nM | CHEMBL3728905 |
| 5.52 | IC50 | 3000 | nM | CHEMBL3732213 |
| 5.51 | IC50 | 3100 | nM | CHEMBL3728464 |
| 5.46 | IC50 | 3500 | nM | CHEMBL3727471 |
| 5.43 | IC50 | 3720 | nM | CHEMBL3731572 |
| 5.43 | IC50 | 3700 | nM | CHEMBL3731235 |
| 5.40 | IC50 | 4000 | nM | CHEMBL3731235 |
| 5.37 | IC50 | 4300 | nM | CHEMBL3732138 |
| 5.27 | IC50 | 5400 | nM | CHEMBL3727505 |
| 5.16 | IC50 | 7000 | nM | CHEMBL3730791 |
| 5.12 | IC50 | 7500 | nM | CHEMBL3730349 |
| 5.06 | IC50 | 8700 | nM | CHEMBL3728324 |
| 5.05 | IC50 | 9000 | nM | CHEMBL3727888 |
| 5.00 | IC50 | 1.01e+04 | nM | CHEMBL3728731 |
CTD chemical–gene interactions
91 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Oxygen | decreases reaction, increases expression, increases reaction | 6 |
| Cisplatin | affects expression, decreases expression, increases expression | 5 |
| Estradiol | affects cotreatment, increases expression, decreases expression | 4 |
| Cyclosporine | decreases expression, increases expression | 4 |
| cobaltous chloride | decreases reaction, decreases abundance, increases expression | 3 |
| Cadmium Chloride | decreases expression, increases expression | 3 |
| tungsten carbide | affects cotreatment, affects binding, increases expression | 2 |
| Zoledronic Acid | increases expression | 2 |
| Ethanol | affects cotreatment, increases expression, decreases expression, increases abundance | 2 |
| Benzo(a)pyrene | decreases expression, increases methylation | 2 |
| Cobalt | affects cotreatment, affects binding, increases expression | 2 |
| Tobacco Smoke Pollution | affects expression, decreases expression | 2 |
| Particulate Matter | affects cotreatment, decreases expression, increases abundance, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| 1-cyclopropyl-4-(4-((5-methyl-3-(3-(4-(trifluoromethoxy)phenyl)-1,2,4-oxadiazol-5-yl)-1H-pyrazol-1-yl)methyl)pyridin-2-yl)piperazine | increases expression, decreases reaction | 1 |
| GSK-J4 | increases expression | 1 |
| 4-hydroxyphenyl 4-isopropoxyphenylsulfone | decreases expression | 1 |
| PF-06840003 | decreases expression, decreases reaction | 1 |
| sotorasib | affects cotreatment, decreases expression | 1 |
| bufotalin | increases expression | 1 |
| chloroacetaldehyde | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| uranyl acetate | affects expression | 1 |
| bisphenol A | affects expression | 1 |
| sodium arsenate | increases abundance, increases expression | 1 |
| trichostatin A | affects expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| zinc chloride | decreases reaction, increases expression | 1 |
| nickel chloride | increases expression | 1 |
| benzo(e)pyrene | decreases methylation | 1 |
ChEMBL screening assays
7 unique, capped per target: 7 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3734144 | Binding | Inhibition of PFKFB4 (unknown origin) expressed in Escherichia coli assessed as ADP level preincubated for 15 mins followed by addition of fructose-6-phosphate as substrate and ATP measured after 40 mins by luciferase assay | New compounds |
Cellosaurus cell lines
5 cell lines: 4 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D6AR | HyCyte A-549 KO-hPFKFB4 | Cancer cell line | Male |
| CVCL_D7WU | Ubigene A-549 PFKFB4 KO | Cancer cell line | Male |
| CVCL_D8S7 | Ubigene HCT 116 PFKFB4 KO | Cancer cell line | Male |
| CVCL_D9MN | Ubigene HEK293 PFKFB4 KO | Transformed cell line | Female |
| CVCL_E0K0 | Ubigene HeLa PFKFB4 KO | Cancer cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.