PGCKA1-AS1

Summary

PGCKA1-AS1 (PGCKA1 antisense RNA 1, HGNC:58757) is a long non-coding RNA gene on chromosome 4p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58757
Approved symbol	PGCKA1-AS1
Name	PGCKA1 antisense RNA 1
Location	4p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000288073
Ensembl biotype	lncRNA
Entrez	124900691

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000662093, ENST00000796210

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000662093 — 4 exons

Exon	Start	End
ENSE00003855923	37476283	37476401
ENSE00003870029	37455480	37455590
ENSE00003873010	37456636	37456793
ENSE00003886653	37454698	37455094

Expression profiles

Bgee: expression breadth broad, 99 present calls, max score 93.07.

Top tissues by expression

99 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.07	gold quality
muscle tissue	UBERON:0002385	74.17	gold quality
tonsil	UBERON:0002372	71.54	gold quality
cortical plate	UBERON:0005343	70.28	gold quality
colonic epithelium	UBERON:0000397	68.88	gold quality
placenta	UBERON:0001987	67.82	gold quality
ganglionic eminence	UBERON:0004023	61.48	gold quality
liver	UBERON:0002107	60.03	gold quality
stomach	UBERON:0000945	57.34	gold quality
gall bladder	UBERON:0002110	55.83	gold quality
body of stomach	UBERON:0001161	55.73	gold quality
cerebellum	UBERON:0002037	55.52	gold quality
cerebellar cortex	UBERON:0002129	55.47	gold quality
cerebellar hemisphere	UBERON:0002245	55.35	gold quality
fallopian tube	UBERON:0003889	55.20	gold quality
body of pancreas	UBERON:0001150	55.18	gold quality
pancreas	UBERON:0001264	54.97	gold quality
monocyte	CL:0000576	54.30	gold quality
islet of Langerhans	UBERON:0000006	53.37	gold quality
right lobe of liver	UBERON:0001114	52.54	gold quality
prefrontal cortex	UBERON:0000451	52.53	gold quality
mucosa of transverse colon	UBERON:0004991	52.40	gold quality
kidney	UBERON:0002113	52.13	gold quality
endometrium	UBERON:0001295	52.01	gold quality
cortex of kidney	UBERON:0001225	51.88	gold quality
fundus of stomach	UBERON:0001160	51.77	gold quality
ovary	UBERON:0000992	51.51	silver quality
duodenum	UBERON:0002114	51.49	gold quality
right hemisphere of cerebellum	UBERON:0014890	51.16	gold quality
corpus callosum	UBERON:0002336	50.89	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.