PHIP
geneOn this page
Also known as ndrpBRWD2RepIDDCAF14FLJ20705
Summary
PHIP (PHIP subunit of CUL4-Ring ligase complex, HGNC:15673) is a protein-coding gene on chromosome 6q14.1, encoding PH-interacting protein (Q8WWQ0). Probable regulator of the insulin and insulin-like growth factor signaling pathways. It is haploinsufficient (ClinGen: sufficient evidence).
This gene encodes a protein that binds to the insulin receptor substrate 1 protein and regulates glucose transporter translocation in skeletal muscle cells. The encoded protein may also regulate growth and survival of pancreatic beta cells. Elevated copy number of this gene may be associated with melanoma severity and the encoded protein may promote melanoma metastasis in human patients.
Source: NCBI Gene 55023 — RefSeq curated summary.
At a glance
- Gene–disease (curated): PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome (Definitive, ClinGen) — +5 more curated relationships
- GWAS associations: 35
- Clinical variants (ClinVar): 1,222 total — 55 pathogenic, 67 likely-pathogenic
- Phenotypes (HPO): 150
- Druggable target: yes
- Dosage sensitivity (ClinGen): haploinsufficiency sufficient evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_017934
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:15673 |
| Approved symbol | PHIP |
| Name | PHIP subunit of CUL4-Ring ligase complex |
| Location | 6q14.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ndrp, BRWD2, RepID, DCAF14, FLJ20705 |
| Ensembl gene | ENSG00000146247 |
| Ensembl biotype | protein_coding |
| OMIM | 612870 |
| Entrez | 55023 |
Gene structure
Transcript identifiers
Ensembl transcripts: 20 — 10 protein_coding, 4 retained_intron, 3 nonsense_mediated_decay, 3 protein_coding_CDS_not_defined
ENST00000275034, ENST00000479165, ENST00000700012, ENST00000700013, ENST00000700114, ENST00000700115, ENST00000700116, ENST00000700117, ENST00000700118, ENST00000700119, ENST00000700120, ENST00000700121, ENST00000700170, ENST00000700171, ENST00000700172, ENST00000913657, ENST00000913658, ENST00000913659, ENST00000913660, ENST00000965196
RefSeq mRNA: 1 — MANE Select: NM_017934
NM_017934
CCDS: CCDS4987
Canonical transcript exons
ENST00000275034 — 40 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001882565 | 79078029 | 79078254 |
| ENSE00002203953 | 79077448 | 79077507 |
| ENSE00002215317 | 79025519 | 79025619 |
| ENSE00002216601 | 78958475 | 78958600 |
| ENSE00002221205 | 79016544 | 79016642 |
| ENSE00002223894 | 78982886 | 78983117 |
| ENSE00002233843 | 79077700 | 79077729 |
| ENSE00002240206 | 79015630 | 79015783 |
| ENSE00002242989 | 79003730 | 79003858 |
| ENSE00002256478 | 79015082 | 79015216 |
| ENSE00002260724 | 79001899 | 79002124 |
| ENSE00002268656 | 79025943 | 79026164 |
| ENSE00002271531 | 78988209 | 78988349 |
| ENSE00002274764 | 79060478 | 79060576 |
| ENSE00002276648 | 78997414 | 78997597 |
| ENSE00002279905 | 79017483 | 79017583 |
| ENSE00002283615 | 78998254 | 78998391 |
| ENSE00002284215 | 78985352 | 78985428 |
| ENSE00002291883 | 79042843 | 79043003 |
| ENSE00002305329 | 79060668 | 79060818 |
| ENSE00002306152 | 79017346 | 79017386 |
| ENSE00002313596 | 79019089 | 79019159 |
| ENSE00002316734 | 79077855 | 79077913 |
| ENSE00002320684 | 78990868 | 78990985 |
| ENSE00002488451 | 78955613 | 78955682 |
| ENSE00003502072 | 78946001 | 78946260 |
| ENSE00003505661 | 78970781 | 78970888 |
| ENSE00003538688 | 78970049 | 78970173 |
| ENSE00003546051 | 78945300 | 78945497 |
| ENSE00003548037 | 78978592 | 78978711 |
| ENSE00003548073 | 78961690 | 78961810 |
| ENSE00003556326 | 78955232 | 78955282 |
| ENSE00003576651 | 78934419 | 78941330 |
| ENSE00003578644 | 78963097 | 78963252 |
| ENSE00003609479 | 78947623 | 78947775 |
| ENSE00003610892 | 78965703 | 78965764 |
| ENSE00003617603 | 78946711 | 78946874 |
| ENSE00003626918 | 78969835 | 78969917 |
| ENSE00003631474 | 78965945 | 78966056 |
| ENSE00003656104 | 78954814 | 78954963 |
Expression profiles
Bgee: expression breadth ubiquitous, 302 present calls, max score 97.67.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 37.0593 / max 664.6102, expressed in 1819 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 74500 | 26.5714 | 1807 |
| 74501 | 7.4899 | 1684 |
| 74498 | 1.8877 | 755 |
| 74499 | 1.1104 | 487 |
Top tissues by expression
303 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| bronchial epithelial cell | CL:0002328 | 97.67 | gold quality |
| epithelium of bronchus | UBERON:0002031 | 97.37 | gold quality |
| ventricular zone | UBERON:0003053 | 97.35 | gold quality |
| bronchus | UBERON:0002185 | 97.27 | gold quality |
| endothelial cell | CL:0000115 | 96.90 | gold quality |
| cerebellar vermis | UBERON:0004720 | 96.74 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 96.15 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 95.90 | gold quality |
| retina | UBERON:0000966 | 95.87 | gold quality |
| mammary duct | UBERON:0001765 | 95.80 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 95.80 | gold quality |
| choroid plexus epithelium | UBERON:0003911 | 95.73 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 95.62 | gold quality |
| pericardium | UBERON:0002407 | 95.61 | gold quality |
| nasopharynx | UBERON:0001728 | 95.60 | gold quality |
| epithelium of mammary gland | UBERON:0003244 | 95.58 | gold quality |
| cranial nerve II | UBERON:0000941 | 95.48 | gold quality |
| hair follicle | UBERON:0002073 | 95.05 | gold quality |
| superficial temporal artery | UBERON:0001614 | 94.93 | gold quality |
| urethra | UBERON:0000057 | 94.88 | gold quality |
| seminal vesicle | UBERON:0000998 | 94.75 | gold quality |
| oviduct epithelium | UBERON:0004804 | 94.71 | gold quality |
| calcaneal tendon | UBERON:0003701 | 94.63 | gold quality |
| embryo | UBERON:0000922 | 94.15 | gold quality |
| upper leg skin | UBERON:0004262 | 94.08 | gold quality |
| lower lobe of lung | UBERON:0008949 | 93.94 | gold quality |
| cardia of stomach | UBERON:0001162 | 93.85 | gold quality |
| CA1 field of hippocampus | UBERON:0003881 | 93.85 | gold quality |
| cauda epididymis | UBERON:0004360 | 93.83 | gold quality |
| caput epididymis | UBERON:0004358 | 93.81 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-5 | yes | 42.57 |
| E-ANND-3 | yes | 10.46 |
| E-GEOD-75140 | no | 1396.37 |
| E-MTAB-6524 | no | 274.82 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
481 targeting PHIP, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-6740-5P | 100.00 | 65.64 | 932 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
Functional genomics
ClinGen dosage: haploinsufficiency 3 (sufficient evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 11)
- The PHIP gene resides on 6q14.1, and although 6q loss has been observed in melanoma, the PHIP locus was preserved in melanoma cell lines and patient samples, and its overexpression was an independent adverse predictor of survival in melanoma patients. (PMID:22511720)
- These results provide further support for PHIP as a molecular prognostic marker of melanoma, and reveal a significant linkage between PHIP levels and ulceration. (PMID:24005052)
- as elevated PHIP copy number appears to be selected for during the progression of primary to metastatic melanoma, these results confirm PHIP as a promising therapeutic target for melanoma. (PMID:29776954)
- The replication initiation determinant protein PHIP modulates replication by recruiting CUL4 to chromatin. (PMID:30018425)
- During mitosis, CRL4 dissociates from RepID and replaces it with RB Binding Protein 7 (RBBP7), which ubiquitinates the SAC mediator BUB3 to enable mitotic exit. (PMID:31911655)
- PHIP drives glioblastoma motility, invasion, and angiogenesis. PHIP regulates expression of focal adhesion proteins and physically interacts with vinculin, mechanisms by which it promotes tumor cell motility and invasion. The presence of elevated PHIP copy number in distinct molecular glioblastoma subtypes provides additional support for its importance to glioblastoma biology. (PMID:32273388)
- Exome Sequencing Identifies Genes and Gene Sets Contributing to Severe Childhood Obesity, Linking PHIP Variants to Repressed POMC Transcription. (PMID:32492392)
- Discovery of a hidden transient state in all bromodomain families. (PMID:33468647)
- DCAF14 promotes stalled fork stability to maintain genome integrity. (PMID:33503431)
- Molecular double clips within RepID WD40 domain control chromatin binding and CRL4-substrate assembly. (PMID:34171797)
- A trivalent nucleosome interaction by PHIP/BRWD2 is disrupted in neurodevelopmental disorders and cancer. (PMID:34819353)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | phip | ENSDARG00000015970 |
| mus_musculus | Phip | ENSMUSG00000032253 |
| rattus_norvegicus | Phip | ENSRNOG00000008652 |
| drosophila_melanogaster | BRWD3 | FBGN0011785 |
Paralogs (2): BRWD3 (ENSG00000165288), BRWD1 (ENSG00000185658)
Protein
Protein identifiers
PH-interacting protein — Q8WWQ0 (reviewed: Q8WWQ0)
Alternative names: DDB1- and CUL4-associated factor 14, IRS-1 PH domain-binding protein, WD repeat-containing protein 11
All UniProt accessions (8): Q8WWQ0, A0A8V8TP75, A0A8V8TPB8, A0A8V8TPK0, A0A8V8TPV5, A0A8V8TQM4, A0A8V8TQP5, A0A8V8TQZ3
UniProt curated annotations — full annotation on UniProt →
Function. Probable regulator of the insulin and insulin-like growth factor signaling pathways. Stimulates cell proliferation through regulation of cyclin transcription and has an anti-apoptotic activity through AKT1 phosphorylation and activation. Plays a role in the regulation of cell morphology and cytoskeletal organization.
Subunit / interactions. Interacts with IRS1 and IRS2. Interacts (via bromo domain) with acetylated lysine residues on histone H1.4, histone H3 and H4 (in vitro).
Subcellular location. Nucleus.
Tissue specificity. Expressed in myeloma and epidermoid carcinoma cell lines.
Disease relevance. Chung-Jansen syndrome (CHUJANS) [MIM:617991] An autosomal dominant disorder characterized by developmental delay, intellectual disability, autistic features, anxiety, hypotonia, obesity, and dysmorphic features. The disease is caused by variants affecting the gene represented in this entry.
RefSeq proteins (1): NP_060404* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001487 | Bromodomain | Domain |
| IPR001680 | WD40_rpt | Repeat |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Homologous_superfamily |
| IPR018359 | Bromodomain_CS | Conserved_site |
| IPR019775 | WD40_repeat_CS | Conserved_site |
| IPR036322 | WD40_repeat_dom_sf | Homologous_superfamily |
| IPR036427 | Bromodomain-like_sf | Homologous_superfamily |
| IPR052060 | Bromo_WD_repeat | Family |
| IPR057451 | BRWD/PHIP_AD | Domain |
| IPR057452 | BRWD/PHIP_N | Domain |
Pfam: PF00400, PF00439, PF25313, PF25437
UniProt features (92 total): modified residue 25, sequence variant 19, compositionally biased region 11, repeat 8, region of interest 8, helix 6, cross-link 5, sequence conflict 3, turn 3, domain 2, chain 1, strand 1
Structure
Experimental structures (PDB)
146 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5S9G | X-RAY DIFFRACTION | 1.09 |
| 5S90 | X-RAY DIFFRACTION | 1.1 |
| 5S98 | X-RAY DIFFRACTION | 1.1 |
| 5S9C | X-RAY DIFFRACTION | 1.14 |
| 5S8X | X-RAY DIFFRACTION | 1.15 |
| 5S97 | X-RAY DIFFRACTION | 1.15 |
| 5S9J | X-RAY DIFFRACTION | 1.15 |
| 7FUS | X-RAY DIFFRACTION | 1.15 |
| 7FUY | X-RAY DIFFRACTION | 1.15 |
| 7FV2 | X-RAY DIFFRACTION | 1.15 |
| 7FV3 | X-RAY DIFFRACTION | 1.15 |
| 7FV4 | X-RAY DIFFRACTION | 1.15 |
| 7FV5 | X-RAY DIFFRACTION | 1.15 |
| 7FV8 | X-RAY DIFFRACTION | 1.15 |
| 7FVF | X-RAY DIFFRACTION | 1.15 |
| 7FVG | X-RAY DIFFRACTION | 1.15 |
| 7FVH | X-RAY DIFFRACTION | 1.15 |
| 7FVK | X-RAY DIFFRACTION | 1.15 |
| 7FVL | X-RAY DIFFRACTION | 1.15 |
| 7FVN | X-RAY DIFFRACTION | 1.15 |
| 7FVP | X-RAY DIFFRACTION | 1.15 |
| 7FVQ | X-RAY DIFFRACTION | 1.15 |
| 5RJJ | X-RAY DIFFRACTION | 1.15 |
| 5S9B | X-RAY DIFFRACTION | 1.15 |
| 7FUU | X-RAY DIFFRACTION | 1.16 |
| 5RJT | X-RAY DIFFRACTION | 1.17 |
| 5S96 | X-RAY DIFFRACTION | 1.17 |
| 7FV9 | X-RAY DIFFRACTION | 1.17 |
| 5S8F | X-RAY DIFFRACTION | 1.18 |
| 5S8V | X-RAY DIFFRACTION | 1.18 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8WWQ0-F1 | 66.57 | 0.32 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (30): 136, 641, 659, 674, 677, 683, 692, 879, 880, 881, 911, 1281, 1283, 1296, 1315, 1359, 1405, 1479, 1497, 1525 …
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-9013418 | RHOBTB2 GTPase cycle |
MSigDB gene sets: 866 (showing top):
GOBP_DNA_TEMPLATED_DNA_REPLICATION_MAINTENANCE_OF_FIDELITY, GOBP_POSITIVE_REGULATION_OF_MITOTIC_NUCLEAR_DIVISION, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_REGULATION_OF_CELL_MORPHOGENESIS, GOBP_REGULATION_OF_PHOSPHORYLATION, GOBP_VESICLE_LOCALIZATION, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, GOBP_REGULATION_OF_NUCLEAR_DIVISION, MODULE_255, TGCTGCT_MIR15A_MIR16_MIR15B_MIR195_MIR424_MIR497, GOCC_VACUOLAR_MEMBRANE, MORF_SNRP70, STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN, GRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP
GO Biological Process (15): regulation of protein phosphorylation (GO:0001932), regulation of transcription by RNA polymerase II (GO:0006357), cytoskeleton organization (GO:0007010), positive regulation of cell population proliferation (GO:0008284), insulin receptor signaling pathway (GO:0008286), regulation of cell shape (GO:0008360), regulation of cell morphogenesis (GO:0022604), negative regulation of apoptotic process (GO:0043066), positive regulation of insulin-like growth factor receptor signaling pathway (GO:0043568), positive regulation of mitotic nuclear division (GO:0045840), positive regulation of DNA-templated transcription (GO:0045893), positive regulation of transcription by RNA polymerase II (GO:0045944), negative regulation of extrinsic apoptotic signaling pathway (GO:2001237), chromatin organization (GO:0006325), regulation of signal transduction (GO:0009966)
GO Molecular Function (3): insulin receptor binding (GO:0005158), histone reader activity (GO:0140566), protein binding (GO:0005515)
GO Cellular Component (1): nucleus (GO:0005634)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| RHOBTB GTPase Cycle | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| regulation of DNA-templated transcription | 2 |
| transcription by RNA polymerase II | 2 |
| protein phosphorylation | 1 |
| regulation of protein modification process | 1 |
| regulation of phosphorylation | 1 |
| organelle organization | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| cell surface receptor protein tyrosine kinase signaling pathway | 1 |
| cellular response to insulin stimulus | 1 |
| regulation of cell morphogenesis | 1 |
| regulation of biological quality | 1 |
| cell morphogenesis | 1 |
| regulation of anatomical structure morphogenesis | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| negative regulation of programmed cell death | 1 |
| positive regulation of signal transduction | 1 |
| regulation of insulin-like growth factor receptor signaling pathway | 1 |
| insulin-like growth factor receptor signaling pathway | 1 |
| regulation of mitotic nuclear division | 1 |
| positive regulation of nuclear division | 1 |
| positive regulation of cell cycle process | 1 |
| mitotic nuclear division | 1 |
| DNA-templated transcription | 1 |
| positive regulation of RNA biosynthetic process | 1 |
| regulation of transcription by RNA polymerase II | 1 |
| positive regulation of DNA-templated transcription | 1 |
| extrinsic apoptotic signaling pathway | 1 |
| negative regulation of apoptotic signaling pathway | 1 |
| regulation of extrinsic apoptotic signaling pathway | 1 |
| cellular component organization | 1 |
| signal transduction | 1 |
| regulation of cell communication | 1 |
| regulation of signaling | 1 |
| regulation of response to stimulus | 1 |
| signaling receptor binding | 1 |
| nucleosome | 1 |
| histone binding | 1 |
Protein interactions and networks
STRING
2612 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PHIP | IRAK1BP1 | Q5VVH5 | 575 |
| PHIP | SPATA25 | Q9BR10 | 504 |
| PHIP | IRS2 | Q9Y4H2 | 497 |
| PHIP | LRWD1 | Q9UFC0 | 422 |
| PHIP | CUL4B | Q13620 | 392 |
| PHIP | ACSS3 | Q9H6R3 | 383 |
| PHIP | ZMYM4 | Q5VZL5 | 378 |
| PHIP | DDB1 | Q16531 | 373 |
| PHIP | GLT8D1 | Q68CQ7 | 367 |
| PHIP | MTCL2 | O94964 | 360 |
| PHIP | SCYL2 | Q6P3W7 | 360 |
| PHIP | ACOT8 | O14734 | 354 |
| PHIP | CRLS1 | Q9UJA2 | 341 |
| PHIP | PLEKHF2 | Q9H8W4 | 335 |
| PHIP | SMARCA4 | P51532 | 334 |
IntAct
51 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CUL4A | COPS2 | psi-mi:“MI:0914”(association) | 0.640 |
| VHL | PHIP | psi-mi:“MI:0915”(physical association) | 0.560 |
| H3C1 | SMCHD1 | psi-mi:“MI:2364”(proximity) | 0.410 |
| PHIP | HNRNPCL2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| PHIP | TPR | psi-mi:“MI:0915”(physical association) | 0.400 |
| PHIP | LMNA | psi-mi:“MI:0915”(physical association) | 0.400 |
| PHIP | HSPA5 | psi-mi:“MI:0915”(physical association) | 0.400 |
| Cbx1 | psi-mi:“MI:0914”(association) | 0.350 | |
| Chaf1a | CBX5 | psi-mi:“MI:0914”(association) | 0.350 |
| RPL10 | RPS6 | psi-mi:“MI:0914”(association) | 0.350 |
| Atrx | ELOC | psi-mi:“MI:0914”(association) | 0.350 |
| Brwd3 | WDR91 | psi-mi:“MI:0914”(association) | 0.350 |
| CUL4B | GPS1 | psi-mi:“MI:0914”(association) | 0.350 |
| Cul4a | GPS1 | psi-mi:“MI:0914”(association) | 0.350 |
| MPHOSPH8 | HCFC1 | psi-mi:“MI:0914”(association) | 0.350 |
| TMPO | psi-mi:“MI:0914”(association) | 0.350 | |
| EGR1 | MAGEB2 | psi-mi:“MI:0914”(association) | 0.350 |
| Eif3e | RPSA | psi-mi:“MI:0914”(association) | 0.350 |
| ORC1 | ZNF768 | psi-mi:“MI:0914”(association) | 0.350 |
| CUL4A | HAX1 | psi-mi:“MI:0914”(association) | 0.350 |
| DCUN1D1 | RGSL1 | psi-mi:“MI:0914”(association) | 0.350 |
| CUL4B | APBB1 | psi-mi:“MI:0914”(association) | 0.350 |
| DCUN1D1 | KLHL18 | psi-mi:“MI:0914”(association) | 0.350 |
| CACNA1C | SNRPGP15 | psi-mi:“MI:0914”(association) | 0.350 |
| TXNIP | ZSWIM8 | psi-mi:“MI:0914”(association) | 0.350 |
| H2BC21 | SMCHD1 | psi-mi:“MI:0914”(association) | 0.350 |
| HMGA1 | SUPT5H | psi-mi:“MI:0914”(association) | 0.350 |
| HMGN5 | SMCHD1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (394): CUL4B (Affinity Capture-Western), CUL4A (Affinity Capture-Western), DDB1 (Affinity Capture-Western), PHIP (Affinity Capture-MS), PHIP (Affinity Capture-MS), PHIP (Affinity Capture-MS), DDB1 (Co-fractionation), PHIP (Affinity Capture-MS), PHIP (Proximity Label-MS), PHIP (Proximity Label-MS), PHIP (Proximity Label-MS), PHIP (Affinity Capture-MS), PHIP (Affinity Capture-MS), PHIP (Affinity Capture-MS), PHIP (Affinity Capture-MS)
ESM2 similar proteins: A0A0R4IES7, A0JN62, A0JNW5, A2AAE1, A2AGL3, A2RSJ4, A2RT67, A2RUS2, A2RV80, B0LPN4, B1H2P5, E7F240, E9Q401, O00507, O94967, P30957, P48553, P51593, Q14161, Q2LD37, Q3TLI0, Q3UHE1, Q3UVG3, Q3UX43, Q5F361, Q5M7Q1, Q5RAQ5, Q5ZJK1, Q658Y4, Q68CL5, Q6BDS2, Q6P6Y1, Q6TEP1, Q6VNB8, Q7TMY8, Q7TSG1, Q7Z6Z7, Q8BHY8, Q8CB44, Q8CGF6
Diamond homologs: A0A0R4IXF6, A0A7U2QYM2, A2AHJ4, A2AUY4, A2BIL7, B2RRD7, B7ZS37, D4A7T3, E9Q2Z1, F1QW93, F1R5H6, F7DRV9, G5E8P1, O15164, O60885, O74350, O88379, O88665, O95696, P13709, P21675, P25440, P35817, P51123, P53236, P54816, P55201, P87152, Q02206, Q03330, Q07442, Q08D75, Q09948, Q12830, Q15059, Q1LUC3, Q23590, Q32S26, Q338B9, Q4R8Y1
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PHIP | “up-regulates activity” | Cullin4-RBX1-DDB1 | binding |
| PHIP | “up-regulates activity” | IRS1 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 74 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Regulation of expression of SLITs and ROBOs | 6 | 8.3× | 8e-03 |
| Neddylation | 7 | 6.6× | 8e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| cytoplasmic translation | 5 | 14.7× | 4e-03 |
| chromatin organization | 6 | 9.4× | 4e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
1222 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 55 |
| Likely pathogenic | 67 |
| Uncertain significance | 498 |
| Likely benign | 336 |
| Benign | 192 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1073105 | NM_017934.7(PHIP):c.1050dup (p.Gly351fs) | Pathogenic |
| 1098849 | NM_018117.12(WDR11):c.1255C>T (p.Gln419Ter) | Pathogenic |
| 1098850 | NM_018117.12(WDR11):c.2931+1G>A | Pathogenic |
| 1098851 | NM_018117.12(WDR11):c.1439del (p.Asn480fs) | Pathogenic |
| 1424195 | NC_000006.11:g.(?79650410)(79787785_?)del | Pathogenic |
| 1676029 | NM_017934.7(PHIP):c.2668C>T (p.Gln890Ter) | Pathogenic |
| 1686056 | NM_017934.7(PHIP):c.2703dup (p.Val902fs) | Pathogenic |
| 1698953 | NM_017934.7(PHIP):c.704_705del (p.Asn234_Tyr235insTer) | Pathogenic |
| 1708636 | NM_017934.7(PHIP):c.748C>T (p.Arg250Ter) | Pathogenic |
| 1710707 | NM_017934.7(PHIP):c.241C>T (p.Arg81Ter) | Pathogenic |
| 1711633 | NM_017934.7(PHIP):c.1628_1653+13del | Pathogenic |
| 1722952 | NM_017934.7(PHIP):c.2656G>T (p.Glu886Ter) | Pathogenic |
| 2067762 | NM_018117.12(WDR11):c.1280T>G (p.Leu427Ter) | Pathogenic |
| 2103265 | NM_018117.12(WDR11):c.1153del (p.Leu385fs) | Pathogenic |
| 2227896 | NM_017934.7(PHIP):c.2363del (p.Lys788fs) | Pathogenic |
| 2499020 | NM_017934.7(PHIP):c.2537+2T>A | Pathogenic |
| 2571255 | NM_017934.7(PHIP):c.703del (p.Tyr235fs) | Pathogenic |
| 2630755 | NM_017934.7(PHIP):c.2670_2671del (p.Lys891fs) | Pathogenic |
| 2664240 | NM_017934.7(PHIP):c.1654-2A>C | Pathogenic |
| 2664242 | NM_017934.7(PHIP):c.2306_2309del (p.Pro769fs) | Pathogenic |
| 2664253 | NM_017934.7(PHIP):c.820C>T (p.Gln274Ter) | Pathogenic |
| 2762988 | NM_017934.7(PHIP):c.815C>G (p.Ser272Ter) | Pathogenic |
| 2785929 | NM_017934.7(PHIP):c.1446_1447del (p.Ser484fs) | Pathogenic |
| 3027385 | NM_017934.7(PHIP):c.1949_1950delinsGTTG (p.Leu650fs) | Pathogenic |
| 3239498 | NM_017934.7(PHIP):c.857dup (p.Ser287fs) | Pathogenic |
| 3359039 | NM_017934.7(PHIP):c.1879+1G>A | Pathogenic |
| 3372383 | NM_017934.7(PHIP):c.97C>T (p.Gln33Ter) | Pathogenic |
| 3638700 | NM_017934.7(PHIP):c.368dup (p.Ala124fs) | Pathogenic |
| 3653303 | NM_017934.7(PHIP):c.1300C>T (p.Arg434Ter) | Pathogenic |
| 3764548 | NM_017934.7(PHIP):c.2246dup (p.Thr750fs) | Pathogenic |
SpliceAI
6172 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 6:78945295:CTTAC:C | donor_loss | 1.0000 |
| 6:78945297:TAC:T | donor_loss | 1.0000 |
| 6:78945298:A:C | donor_loss | 1.0000 |
| 6:78945299:C:G | donor_loss | 1.0000 |
| 6:78945299:CCTTG:C | donor_gain | 1.0000 |
| 6:78945495:GTA:G | acceptor_gain | 1.0000 |
| 6:78945498:C:CC | acceptor_gain | 1.0000 |
| 6:78945505:A:C | acceptor_gain | 1.0000 |
| 6:78945994:GTCTT:G | donor_loss | 1.0000 |
| 6:78945998:TACT:T | donor_loss | 1.0000 |
| 6:78945999:A:AC | donor_gain | 1.0000 |
| 6:78946000:C:A | donor_loss | 1.0000 |
| 6:78946000:C:CC | donor_gain | 1.0000 |
| 6:78946000:CTT:C | donor_gain | 1.0000 |
| 6:78946008:C:A | donor_gain | 1.0000 |
| 6:78946256:CAGGG:C | acceptor_gain | 1.0000 |
| 6:78946257:AGGG:A | acceptor_gain | 1.0000 |
| 6:78946258:GGG:G | acceptor_gain | 1.0000 |
| 6:78946258:GGGC:G | acceptor_loss | 1.0000 |
| 6:78946259:GG:G | acceptor_gain | 1.0000 |
| 6:78946259:GGC:G | acceptor_loss | 1.0000 |
| 6:78946260:GC:G | acceptor_loss | 1.0000 |
| 6:78946261:C:CC | acceptor_gain | 1.0000 |
| 6:78946723:C:CT | donor_gain | 1.0000 |
| 6:78946724:T:TT | donor_gain | 1.0000 |
| 6:78946870:TAAAT:T | acceptor_gain | 1.0000 |
| 6:78946872:AAT:A | acceptor_gain | 1.0000 |
| 6:78946875:C:CC | acceptor_gain | 1.0000 |
| 6:78946875:CT:C | acceptor_loss | 1.0000 |
| 6:78947619:ATAC:A | donor_gain | 1.0000 |
AlphaMissense
11990 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 6:78946852:A:G | L1410P | 1.000 |
| 6:78947646:A:C | Y1395D | 1.000 |
| 6:78947656:A:C | N1391K | 1.000 |
| 6:78947656:A:T | N1391K | 1.000 |
| 6:78947669:A:G | L1387P | 1.000 |
| 6:78947732:A:T | V1366D | 1.000 |
| 6:78947772:A:G | Y1353H | 1.000 |
| 6:78954845:A:G | F1341S | 1.000 |
| 6:78954906:A:G | W1321R | 1.000 |
| 6:78954906:A:T | W1321R | 1.000 |
| 6:78958543:A:C | F1238L | 1.000 |
| 6:78958543:A:T | F1238L | 1.000 |
| 6:78958545:A:G | F1238L | 1.000 |
| 6:78958581:A:G | W1226R | 1.000 |
| 6:78958581:A:T | W1226R | 1.000 |
| 6:78965730:A:G | W1118R | 1.000 |
| 6:78965730:A:T | W1118R | 1.000 |
| 6:78965734:A:C | S1116R | 1.000 |
| 6:78965734:A:T | S1116R | 1.000 |
| 6:78965736:T:G | S1116R | 1.000 |
| 6:78965761:C:A | W1107C | 1.000 |
| 6:78965761:C:G | W1107C | 1.000 |
| 6:78965762:C:G | W1107S | 1.000 |
| 6:78965763:A:G | W1107R | 1.000 |
| 6:78965763:A:T | W1107R | 1.000 |
| 6:78965948:A:T | V1105D | 1.000 |
| 6:78966014:C:A | G1083V | 1.000 |
| 6:78966014:C:T | G1083E | 1.000 |
| 6:78966015:C:G | G1083R | 1.000 |
| 6:78966015:C:T | G1083R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000011484 (6:78989571 A>G), RS1000038125 (6:79051215 T>C), RS1000043880 (6:79078248 A>G), RS1000044372 (6:78940322 C>T), RS1000047406 (6:78969755 C>A,G), RS1000094732 (6:79076246 G>A), RS1000104981 (6:78995134 C>T), RS1000114851 (6:79002655 T>C,G), RS1000117673 (6:78942094 T>C), RS1000129041 (6:78993298 C>T), RS1000153775 (6:79046451 C>G,T), RS1000163261 (6:79030544 G>C), RS1000177442 (6:78963688 A>G), RS1000185367 (6:79002304 T>G), RS1000227296 (6:78996678 A>G)
Disease associations
OMIM: gene MIM:612870 | disease phenotypes: MIM:617991, MIM:620237, MIM:614858, MIM:146110, MIM:300958, MIM:147950, MIM:616839
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| developmental delay, intellectual disability, obesity, and dysmorphic features | Definitive | Autosomal dominant |
| PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome | Definitive | Autosomal dominant |
| hypogonadotropic hypogonadism 14 with or without anosmia | Strong | Autosomal dominant |
| intellectual developmental disorder, autosomal recessive 78 | Strong | Autosomal recessive |
| hypogonadotropic hypogonadism | Supportive | Autosomal dominant |
| Kallmann syndrome | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome | Definitive | AD |
Mondo (15): PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome (MONDO:0035133), microcephaly (MONDO:0001149), intellectual developmental disorder, autosomal recessive 78 (MONDO:0859373), hypogonadotropic hypogonadism 14 with or without anosmia (MONDO:0013926), hypogonadotropic hypogonadism 7 with or without anosmia (MONDO:0007794), amenorrhea (MONDO:0001836), intellectual disability, X-linked 102 (MONDO:0010497), autism spectrum disorder (MONDO:0005258), hypogonadotropic hypogonadism (MONDO:0018555), intellectual disability (MONDO:0001071), exercise intolerance, riboflavin-responsive (MONDO:0014795), CHARGE syndrome (MONDO:0008965), hereditary breast ovarian cancer syndrome (MONDO:0003582), (MONDO:0060712), Kallmann syndrome (MONDO:0018800)
Orphanet (8): PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome (Orphanet:589905), Kallmann syndrome (Orphanet:478), Normosmic congenital hypogonadotropic hypogonadism (Orphanet:432), X-linked intellectual disability-hypotonia-movement disorder syndrome (Orphanet:457260), CHARGE syndrome (Orphanet:138), Hereditary breast and/or ovarian cancer syndrome (Orphanet:145), NON RARE IN EUROPE: Autism (Orphanet:106), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
150 total (30 of 150 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000002 | Abnormality of body height |
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000008 | Abnormal morphology of female internal genitalia |
| HP:0000013 | Hypoplasia of the uterus |
| HP:0000026 | Male hypogonadism |
| HP:0000027 | Azoospermia |
| HP:0000028 | Cryptorchidism |
| HP:0000044 | Hypogonadotropic hypogonadism |
| HP:0000054 | Micropenis |
| HP:0000104 | Renal agenesis |
| HP:0000118 | Phenotypic abnormality |
| HP:0000134 | Female hypogonadism |
| HP:0000144 | Decreased fertility |
| HP:0000164 | Abnormality of the dentition |
| HP:0000175 | Cleft palate |
| HP:0000218 | High palate |
| HP:0000233 | Thin vermilion border |
| HP:0000252 | Microcephaly |
| HP:0000278 | Retrognathia |
| HP:0000286 | Epicanthus |
| HP:0000308 | Microretrognathia |
| HP:0000311 | Round face |
| HP:0000316 | Hypertelorism |
| HP:0000322 | Short philtrum |
| HP:0000343 | Long philtrum |
| HP:0000347 | Micrognathia |
| HP:0000348 | High forehead |
| HP:0000400 | Macrotia |
| HP:0000403 | Recurrent otitis media |
GWAS associations
35 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001525_23 | Visceral fat | 6.000000e-06 |
| GCST001762_862 | Obesity-related traits | 5.000000e-06 |
| GCST002233_1 | Adiponectin levels | 3.000000e-14 |
| GCST002976_5 | HIV-1 viral setpoint | 6.000000e-06 |
| GCST004093_13 | Prostate-specific antigen levels | 3.000000e-11 |
| GCST004093_14 | Prostate-specific antigen levels | 4.000000e-18 |
| GCST004093_15 | Prostate-specific antigen levels | 1.000000e-35 |
| GCST004093_16 | Prostate-specific antigen levels | 4.000000e-43 |
| GCST004094_1 | Prostate-specific antigen levels (conditioned on lead SNPs) | 9.000000e-25 |
| GCST004094_7 | Prostate-specific antigen levels (conditioned on lead SNPs) | 5.000000e-18 |
| GCST004879_3 | Sjögren’s syndrome | 6.000000e-06 |
| GCST005316_564 | Intelligence (MTAG) | 6.000000e-10 |
| GCST005316_565 | Intelligence (MTAG) | 6.000000e-10 |
| GCST006227_5 | Diastolic blood pressure | 3.000000e-09 |
| GCST006231_30 | Mean arterial pressure | 2.000000e-06 |
| GCST007094_26 | Diastolic blood pressure | 2.000000e-13 |
| GCST007099_78 | Systolic blood pressure | 4.000000e-09 |
| GCST007267_218 | Systolic blood pressure | 8.000000e-12 |
| GCST007507_14 | Benign prostatic hyperplasia and lower urinary tract symptoms | 3.000000e-15 |
| GCST007513_2 | Prostate-specific antigen levels | 7.000000e-08 |
| GCST007847_101 | Type 2 diabetes | 3.000000e-09 |
| GCST007847_54 | Type 2 diabetes | 5.000000e-08 |
| GCST008860_8 | Prostate cancer | 8.000000e-06 |
| GCST009380_3 | Type 2 diabetes (adjusted for BMI) | 4.000000e-09 |
| GCST009391_1160 | Metabolite levels | 1.000000e-06 |
| GCST009391_282 | Metabolite levels | 2.000000e-06 |
| GCST009391_291 | Metabolite levels | 2.000000e-06 |
| GCST009391_367 | Metabolite levels | 4.000000e-06 |
| GCST009614_2 | LDL cholesterol levels x loop diuretics use interaction | 4.000000e-08 |
| GCST010118_118 | Type 2 diabetes | 5.000000e-17 |
EFO canonical traits (16, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0003939 | energy intake |
| EFO:0004502 | adiponectin measurement |
| EFO:0006319 | HIV viral set point measurement |
| EFO:0004337 | intelligence |
| EFO:0006336 | diastolic blood pressure |
| EFO:0006340 | mean arterial pressure |
| EFO:0006335 | systolic blood pressure |
| EFO:0008008 | lower urinary tract symptom |
| EFO:0010460 | anthranilic acid measurement |
| EFO:0010424 | triacylglycerol 54:6 measurement |
| EFO:0010425 | triacylglycerol 54:7 measurement |
| EFO:0010435 | triacylglycerol 56:8 measurement |
| EFO:0004611 | low density lipoprotein cholesterol measurement |
| EFO:0004614 | apolipoprotein A 1 measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0011013 | vaginal microbiome measurement |
MeSH disease descriptors (7)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D000568 | Amenorrhea | C23.550.568.500 |
| D058747 | CHARGE Syndrome | C09.218.458.341.186.500.250; C10.597.751.418.341.186.500.250; C10.597.751.941.162.625.250; C11.270.147.500; C11.966.075.375.250; C16.131.077.299.250; C16.320.165; C23.888.592.763.393.341.186.500.500; C23.888.592.763.941.162.625.500 |
| D061325 | Hereditary Breast and Ovarian Cancer Syndrome | C04.588.180.483; C04.588.322.455.431; C04.700.517; C12.050.351.500.056.630.705.431; C12.050.351.937.418.685.431; C12.100.250.056.630.705.431; C12.900.418.685.431; C16.320.700.517; C17.800.090.500.483; C19.344.410.431; C19.391.630.705.431 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D017436 | Kallmann Syndrome | C12.050.351.875.253.096.750; C12.200.706.316.096.750; C12.800.316.096.750; C16.131.939.316.096.750; C16.320.467; C19.391.119.096.750; C19.391.482.600 |
| D008831 | Microcephaly | C05.660.207.620; C10.500.507.400.500; C16.131.621.207.620; C16.131.666.507.400.500 |
| C562785 | Idiopathic Hypogonadotropic Hypogonadism (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2176773 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: other protein — Non-enzymatic BRD containing proteins
CTD chemical–gene interactions
47 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects methylation, decreases expression, increases abundance, increases expression | 4 |
| Valproic Acid | affects cotreatment, decreases expression | 4 |
| trichostatin A | affects expression, decreases expression | 2 |
| Panobinostat | affects cotreatment, decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| TAK-243 | decreases sumoylation | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | decreases methylation | 1 |
| sodium arsenate | decreases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| arsenite | affects binding, decreases reaction | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| manganese chloride | decreases expression, increases abundance | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| coumarin | increases phosphorylation | 1 |
| beta-methylcholine | affects expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| CGP 52608 | increases reaction, affects binding | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| bisphenol S | affects expression | 1 |
| jinfukang | decreases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Arsenic | decreases expression, increases abundance | 1 |
ChEMBL screening assays
17 unique, capped per target: 17 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL2186998 | Binding | Inhibition of His6FLAG-tagged PHIP-BD2 expressed in Escherichia coli assessed as change in melting temperature at 100 uM by thermal shift assay | Fragment-based discovery of bromodomain inhibitors part 2: optimization of phenylisoxazole sulfonamides. — J Med Chem |
Cellosaurus cell lines
3 cell lines: 3 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2AL | Abcam HeLa PHIP KO | Cancer cell line | Female |
| CVCL_TD25 | HAP1 PHIP (-) 1 | Cancer cell line | Male |
| CVCL_TD26 | HAP1 PHIP (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
382 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00328926 | PHASE4 | TERMINATED | Luveris® (Lutropin Alfa for Injection) in Women With Hypogonadotropic Hypogonadism (Luteinizing Hormone [LH] Less Than [<] 1.2 International Unit Per Liter [IU/L]) |
| NCT01403532 | PHASE4 | COMPLETED | Sequential Therapy for Hypogonadotropic Hypogonadism |
| NCT01454011 | PHASE4 | COMPLETED | The Effect of Testosterone Replacement on the High Density Lipoprotein Cholesterol Subgroups |
| NCT01601327 | PHASE4 | COMPLETED | Effects of Medications in Patients With Hypogonadism |
| NCT02310074 | PHASE4 | UNKNOWN | Efficacy and Safety of Pulsatile Gonadotropin Releasing Hormone Pump Treatment in Patients With Idiopathic Hypogonadotropic Hypogonadism |
| NCT02880280 | PHASE4 | UNKNOWN | Human Menopausal Gonadotropin Combining With Human Chorionic Gonadotropin Treat Congenital Hypogonadotropic Hypogonadism |
| NCT03490513 | PHASE4 | COMPLETED | Aromatase Inhibitors and Weight Loss in Severely Obese Men With Hypogonadism |
| NCT04456296 | PHASE4 | COMPLETED | A Study of the Effect of Testosterone Replacement Therapy on Blood Pressure in Adult Male Participants With Hypogonadism |
| NCT05205837 | PHASE4 | TERMINATED | A Randomized, Double-blinded, Clinical, Placebo-controlled Trial on the Effects of Therapy With Letrozole and hUman Choriongonadotropin in Male Hypogonadism Induced by Illicit Use of Anabolic Androgenic Steroids- The LUCAS Trial |
| NCT03687606 | PHASE4 | UNKNOWN | Efficacy and Safety of Long Term Use of hCG or hCG Plus hMG in Males With Isolated Hypogonadotropic Hypogonadism (IHH) |
| NCT01103518 | PHASE4 | UNKNOWN | Ethinyl Estradiol and Cyproterone Acetate in Irregular Menstruation |
| NCT01206153 | PHASE4 | COMPLETED | Metformin for Treatment Antipsychotic Induced Amenorrhea in Female Schizophrenic Patients |
| NCT02393482 | PHASE4 | UNKNOWN | Psychological Impact of Amenorrhea in Women With Endometriosis |
| NCT00391261 | PHASE4 | COMPLETED | An Open-label Trial of Metformin for Weight Control of Pediatric Patients on Antipsychotic Medications. |
| NCT01028820 | PHASE4 | COMPLETED | FMRI Brain Activation of Aripiprazole Treatment in Autism Spectrum Disorders |
| NCT01333865 | PHASE4 | COMPLETED | A Study of Memantine Hydrochloride (Namenda®) for Cognitive and Behavioral Impairment in Adults With Autism Spectrum Disorders |
| NCT01337700 | PHASE4 | COMPLETED | Milnacipran in Autism and the Functional Locus Coeruleus and Noradrenergic Model of Autism |
| NCT01695200 | PHASE4 | COMPLETED | Omega-3 Fatty Acids in Autism Spectrum Disorders |
| NCT02096952 | PHASE4 | COMPLETED | Methylphenidate ER Liquid Formulation in Adults With ASD and ADHD |
| NCT02235467 | PHASE4 | COMPLETED | Multisite Study: Parental Training Using Video Modelling to Develop Social Skills in Children With Autism |
| NCT02940574 | PHASE4 | COMPLETED | Neural and Behavioral Effects of Oxytocin in Autism Spectrum Disorders |
| NCT03333629 | PHASE4 | COMPLETED | Promoting Positive Outcomes for Individuals With ASD: Linking Early Detection, Treatment, and Long-term Outcomes |
| NCT03337646 | PHASE4 | COMPLETED | Evaluation of the Effect and Safety of Lisdexamfetamine in Children Aged 6-12 With ADHD and Autism |
| NCT03538431 | PHASE4 | COMPLETED | Improving Driving in Young People With Autism Spectrum Disorders |
| NCT03757585 | PHASE4 | COMPLETED | Natural Treatments for the Management of Emotional Dysregulation in Youth With Non-verbal Learning Disability (NVLD) and/or Autism Spectrum Disorders (ASD) |
| NCT04903353 | PHASE4 | COMPLETED | Pragmatic Trial Comparing Weight Gain in Children With Autism Taking Risperidone Versus Aripiprazole |
| NCT05063656 | PHASE4 | COMPLETED | Biomarker-Driven Pharmacological Treatment of Adolescents With Autism Spectrum Disorder With Gabapentin |
| NCT05146245 | PHASE4 | UNKNOWN | Safety and Pharmacokinetics of Antipsychotics in Children 2: Studying TDM in an RCT |
| NCT05916339 | PHASE4 | RECRUITING | AWARE: Management of ADHD in Autism Spectrum Disorder |
| NCT05954052 | PHASE4 | TERMINATED | A Study of Glutathione in Children With Autism Spectrum Disorder |
| NCT06853665 | PHASE4 | RECRUITING | The TEAM Study - Treatment Efficacy for Autism/Attention Using Mixed Amphetamine |
| NCT07054697 | PHASE4 | COMPLETED | Pilot-RCT With Individualized Homeopathic Treatment in the Children With Autism Spectrum Disorder |
| NCT07161804 | PHASE4 | COMPLETED | Pilot RCT Using Homeopathic Medicines in ASD |
| NCT07439042 | PHASE4 | NOT_YET_RECRUITING | Buspirone for Anxiety in Autistic Youth |
| NCT00467870 | PHASE3 | COMPLETED | Long-term Safety Study of Intramuscular Injections of 750 mg and 1000 mg Testosterone Undecanoate in Hypogonadal Men |
| NCT00962637 | PHASE3 | COMPLETED | Study to Evaluate the Safety and Efficacy of Androxal™ Treatment in Men With Secondary Hypogonadism |
| NCT01067365 | PHASE3 | COMPLETED | Study to Evaluate the Safety and Efficacy of Androxal Treatment in Men With Secondary Hypogonadism |
| NCT01532414 | PHASE3 | COMPLETED | Phase III Study to Evaluated Morning Testosterone Normalization in Men With Secondary Hypogonadism |
| NCT01534208 | PHASE3 | COMPLETED | Safety Study of Enclomiphene Citrate in the Treatment of Men With Secondary Hypogonadism |
| NCT01709331 | PHASE3 | COMPLETED | A Study of the Efficacy and Safety of Corifollitropin Alfa (MK-8962) in Combination With Human Chorionic Gonadotropin (hCG) in Adult Men With Hypogonadotropic Hypogonadism (HH) (P07937) |
Related Atlas pages
- Associated diseases: hypogonadotropic hypogonadism 14 with or without anosmia, intellectual developmental disorder, autosomal recessive 78, PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome, hypogonadotropic hypogonadism, Kallmann syndrome
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): amenorrhea, anorexia nervosa, benign prostatic hyperplasia, CHARGE syndrome, exercise intolerance, riboflavin-responsive, hereditary breast ovarian cancer syndrome, hypogonadotropic hypogonadism, hypogonadotropic hypogonadism 14 with or without anosmia, hypogonadotropic hypogonadism 7 with or without anosmia, intellectual developmental disorder, autosomal recessive 78, intellectual disability, X-linked 102, Kallmann syndrome, PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome, Sjogren syndrome