PHLDA1-DT

Summary

PHLDA1-DT (PHLDA1 divergent transcript, HGNC:55470) is a long non-coding RNA gene on chromosome 12q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55470
Approved symbol	PHLDA1-DT
Name	PHLDA1 divergent transcript
Location	12q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000257839
Ensembl biotype	lncRNA
Entrez	120766142
RNAcentral	URS00026A1A46 — lncRNA, 2116 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000547721

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000547721 — 2 exons

Exon	Start	End
ENSE00004213696	76031812	76032802
ENSE00004213697	76033264	76033897

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 71.68.

Top tissues by expression

224 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	71.68	gold quality
colonic epithelium	UBERON:0000397	69.15	silver quality
cortical plate	UBERON:0005343	63.80	gold quality
ganglionic eminence	UBERON:0004023	61.97	gold quality
ventricular zone	UBERON:0003053	60.70	gold quality
islet of Langerhans	UBERON:0000006	56.45	gold quality
descending thoracic aorta	UBERON:0002345	53.74	gold quality
calcaneal tendon	UBERON:0003701	53.65	gold quality
prefrontal cortex	UBERON:0000451	52.99	gold quality
muscle of leg	UBERON:0001383	52.99	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.80	gold quality
gastrocnemius	UBERON:0001388	52.75	gold quality
pancreas	UBERON:0001264	52.63	gold quality
adrenal tissue	UBERON:0018303	51.93	gold quality
gall bladder	UBERON:0002110	51.58	gold quality
monocyte	CL:0000576	50.79	silver quality
body of pancreas	UBERON:0001150	50.62	gold quality
right lobe of liver	UBERON:0001114	49.47	gold quality
right adrenal gland cortex	UBERON:0035827	48.97	gold quality
Brodmann (1909) area 9	UBERON:0013540	48.38	gold quality
lymph node	UBERON:0000029	48.36	gold quality
hindlimb stylopod muscle	UBERON:0004252	47.87	silver quality
tibial artery	UBERON:0007610	47.67	gold quality
left coronary artery	UBERON:0001626	47.18	gold quality
left adrenal gland cortex	UBERON:0035825	47.13	gold quality
adrenal gland	UBERON:0002369	46.94	gold quality
right ovary	UBERON:0002118	46.93	gold quality
lower lobe of lung	UBERON:0008949	46.87	silver quality
right adrenal gland	UBERON:0001233	46.72	gold quality
tendon	UBERON:0000043	46.70	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.