PIK3CD
gene geneOn this page
Also known as p110D
Summary
PIK3CD (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, HGNC:8977) is a protein-coding gene on chromosome 1p36.22, encoding Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (O00329). Phosphoinositide-3-kinase (PI3K) phosphorylates phosphatidylinositol (PI) and its phosphorylated derivatives at position 3 of the inositol ring to produce 3-phosphoinositides.
Phosphoinositide 3-kinases (PI3Ks) phosphorylate inositol lipids and are involved in the immune response. The protein encoded by this gene is a class I PI3K found primarily in leukocytes. Like other class I PI3Ks (p110-alpha p110-beta, and p110-gamma), the encoded protein binds p85 adapter proteins and GTP-bound RAS. However, unlike the other class I PI3Ks, this protein phosphorylates itself, not p85 protein.
Source: NCBI Gene 5293 — RefSeq curated summary.
At a glance
- Gene–disease (curated): immunodeficiency 14b, autosomal recessive (Definitive, ClinGen) — +1 more curated relationship
- GWAS associations: 9
- Clinical variants (ClinVar): 968 total — 19 pathogenic, 14 likely-pathogenic (top 3% of genes corpus-wide)
- Regional missense constraint (gnomAD): 2 of 6 regions constrained (≈8% of expected missense variation)
- GTEx eGene: eQTL in 26 tissues, sQTL in 7 (q < 0.05)
- Phenotypes (HPO): 142
- Drug target: yes — 18 curated mechanism-of-action drugs, 26 via a complex or family; 66 molecules with ChEMBL bioactivity (top 1% of genes corpus-wide)
- Approved drugs (ChEMBL mechanism of action): 5 — Copanlisib, Duvelisib Monohydrate, Idelalisib, +2 more
- Constraint (gnomAD): pLI 1.00 (loss-of-function intolerant), LOEUF 0.23 (highly constrained)
- MANE Select transcript:
NM_005026 - Interaction hub: 9,893 STRING partners (top 1% of genes corpus-wide)
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:8977 |
| Approved symbol | PIK3CD |
| Name | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| Location | 1p36.22 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | p110D |
| Ensembl gene | ENSG00000171608 |
| Ensembl biotype | protein_coding |
| OMIM | 602839 |
| Entrez | 5293 |
Gene structure
Transcript identifiers
Ensembl transcripts: 38 — 25 protein_coding, 9 retained_intron, 2 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined
MANE Select: ENST00000377346
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2, TSL 2: 1, TSL 3: 1, TSL 5: 1
ENST00000377346, ENST00000361110, ENST00000479223, ENST00000481137, ENST00000484851, ENST00000698706, ENST00000698707, ENST00000698708, ENST00000698709, ENST00000698710, ENST00000698711, ENST00000698712, ENST00000698713, ENST00000698714, ENST00000698715, ENST00000698716, ENST00000698717, ENST00000698718, ENST00000698719, ENST00000698786, ENST00000698787, ENST00000698788, ENST00000698789, ENST00000892287, ENST00000892288, ENST00000892289, ENST00000892290, ENST00000932635, ENST00000932636, ENST00000932637, ENST00000932638, ENST00000932639, ENST00000960479, ENST00000960480, ENST00000960481, ENST00000960482, ENST00001052785, ENST00001145842
RefSeq mRNA: 7 — MANE Select: NM_005026
NM_001350234, NM_001350235, NM_001437546, NM_001437547, NM_001438338, NM_001439206, NM_005026
CCDS: CCDS104, CCDS90856
Canonical transcript exons
ENST00000377346 — 24 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001149505 | 9720112 | 9720242 |
| ENSE00001149519 | 9724804 | 9724936 |
| ENSE00001149532 | 9724276 | 9724421 |
| ENSE00001149551 | 9723125 | 9723292 |
| ENSE00001149563 | 9722528 | 9722606 |
| ENSE00001149574 | 9722244 | 9722356 |
| ENSE00001149616 | 9719921 | 9720017 |
| ENSE00001149626 | 9718694 | 9718915 |
| ENSE00001149633 | 9717537 | 9717626 |
| ENSE00001149654 | 9716440 | 9716619 |
| ENSE00001149661 | 9715849 | 9716078 |
| ENSE00001180741 | 9721975 | 9722153 |
| ENSE00001180748 | 9721761 | 9721860 |
| ENSE00001180753 | 9721444 | 9721587 |
| ENSE00001180759 | 9721127 | 9721248 |
| ENSE00001284058 | 9720742 | 9720909 |
| ENSE00001298047 | 9720611 | 9720661 |
| ENSE00001643426 | 9723969 | 9724092 |
| ENSE00001879105 | 9715541 | 9715769 |
| ENSE00002225148 | 9726909 | 9729114 |
| ENSE00003550926 | 9716959 | 9717108 |
| ENSE00003974493 | 9691467 | 9691571 |
| ENSE00003974496 | 9651731 | 9651802 |
| ENSE00003974501 | 9710424 | 9710596 |
Expression profiles
Bgee: expression breadth ubiquitous, 253 present calls, max score 97.96.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 22.6697 / max 892.4409, expressed in 1672 samples.
Highest expression (Bgee): granulocyte, blood, lymph node, leukocyte, mononuclear cell.
Genetic regulation across tissues (GTEx eQTL / sQTL)
PIK3CD is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 26 tissues and its splicing (sQTL) in 7 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 33 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Artery Tibial | eqtl | 1.8e-27 | +0.23 | 1:9689877:T:G |
| Spleen | sqtl | 1.4e-16 | -1.71 | 1:9723347:G:A |
| Cells Cultured fibroblasts | eqtl | 2.0e-13 | +0.17 | 1:9689877:T:G |
| Nerve Tibial | eqtl | 2.9e-12 | +0.17 | 1:9690399:T:C |
| Brain Cortex | eqtl | 1.9e-11 | +0.36 | 1:9690399:T:C |
| Artery Aorta | eqtl | 8.6e-11 | +0.22 | 1:9681654:C:G |
| Whole Blood | sqtl | 1.6e-10 | -1.09 | 1:9723347:G:A |
| Brain Cerebellum | eqtl | 3.7e-10 | +0.38 | 1:9690399:T:C |
| Brain Frontal Cortex BA9 | eqtl | 3.8e-10 | +0.39 | 1:9689877:T:G |
| Skin Sun Exposed Lower leg | eqtl | 5.7e-08 | +0.16 | 1:9690399:T:C |
| Esophagus Gastroesophageal Junction | eqtl | 1.4e-07 | +0.19 | 1:9689877:T:G |
| Colon Sigmoid | eqtl | 2.5e-07 | +0.22 | 1:9689877:T:G |
| Esophagus Muscularis | eqtl | 4.6e-07 | +0.15 | 1:9689877:T:G |
| Skin Not Sun Exposed Suprapubic | eqtl | 1.2e-06 | +0.16 | 1:9689877:T:G |
| Stomach | eqtl | 3.3e-06 | +0.15 | 1:9689877:T:G |
| Pancreas | eqtl | 2.9e-05 | +0.19 | 1:9690399:T:C |
| Colon Transverse | eqtl | 2.0e-04 | +0.11 | 1:9690399:T:C |
| Breast Mammary Tissue | eqtl | 4.3e-04 | +0.12 | 1:9688387:T:G |
| Brain Cerebellar Hemisphere | eqtl | 4.6e-04 | +0.23 | 1:9683176:T:C |
| Lung | sqtl | 9.3e-04 | -0.89 | 1:9750305:C:T |
FANTOM5 promoters
7 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 529 | 16.8188 | 819 |
| 533 | 3.7718 | 1325 |
| 530 | 1.0614 | 270 |
| 532 | 0.4771 | 234 |
| 534 | 0.2434 | 111 |
| 536 | 0.2154 | 66 |
| 201347 | 0.0818 | 35 |
Top tissues by expression
showing 100 of 287 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| granulocyte | CL:0000094 | 97.96 | gold quality |
| blood | UBERON:0000178 | 97.31 | gold quality |
| lymph node | UBERON:0000029 | 94.11 | gold quality |
| leukocyte | CL:0000738 | 93.94 | gold quality |
| mononuclear cell | CL:0000842 | 93.63 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 93.63 | gold quality |
| spleen | UBERON:0002106 | 93.56 | gold quality |
| monocyte | CL:0000576 | 93.52 | gold quality |
| vermiform appendix | UBERON:0001154 | 93.49 | gold quality |
| bone marrow cell | CL:0002092 | 92.76 | gold quality |
| bone marrow | UBERON:0002371 | 90.87 | gold quality |
| periodontal ligament | UBERON:0008266 | 90.70 | gold quality |
| caecum | UBERON:0001153 | 90.67 | gold quality |
| paraflocculus | UBERON:0005351 | 87.99 | silver quality |
| thymus | UBERON:0002370 | 87.84 | gold quality |
| frontal pole | UBERON:0002795 | 87.84 | silver quality |
| epithelium of nasopharynx | UBERON:0001951 | 87.20 | gold quality |
| parietal pleura | UBERON:0002400 | 87.04 | gold quality |
| ileal mucosa | UBERON:0000331 | 86.61 | gold quality |
| amniotic fluid | UBERON:0000173 | 86.20 | gold quality |
| tibia | UBERON:0000979 | 86.19 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 86.03 | gold quality |
| gluteal muscle | UBERON:0002000 | 85.91 | gold quality |
| triceps brachii | UBERON:0001509 | 85.69 | gold quality |
| pleura | UBERON:0000977 | 85.30 | gold quality |
| tonsil | UBERON:0002372 | 85.19 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 84.99 | silver quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 83.74 | gold quality |
| cartilage tissue | UBERON:0002418 | 82.93 | gold quality |
| decidua | UBERON:0002450 | 82.53 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 82.07 | gold quality |
| parotid gland | UBERON:0001831 | 82.02 | silver quality |
| endometrium epithelium | UBERON:0004811 | 82.02 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 81.88 | gold quality |
| visceral pleura | UBERON:0002401 | 81.47 | gold quality |
| gall bladder | UBERON:0002110 | 81.43 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 81.18 | silver quality |
| upper lobe of lung | UBERON:0008948 | 81.00 | gold quality |
| stromal cell of endometrium | CL:0002255 | 80.98 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 80.89 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 80.34 | gold quality |
| cortical plate | UBERON:0005343 | 80.30 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 80.03 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 80.00 | gold quality |
| diaphragm | UBERON:0001103 | 79.85 | gold quality |
| small intestine | UBERON:0002108 | 79.57 | gold quality |
| right coronary artery | UBERON:0001625 | 79.50 | gold quality |
| right lung | UBERON:0002167 | 79.30 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 79.12 | gold quality |
| lung | UBERON:0002048 | 78.99 | gold quality |
| mucosa of stomach | UBERON:0001199 | 78.77 | gold quality |
| layer of synovial tissue | UBERON:0007616 | 78.54 | silver quality |
| apex of heart | UBERON:0002098 | 78.50 | gold quality |
| left ovary | UBERON:0002119 | 78.38 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 78.29 | gold quality |
| superficial temporal artery | UBERON:0001614 | 78.28 | gold quality |
| omental fat pad | UBERON:0010414 | 78.25 | gold quality |
| peritoneum | UBERON:0002358 | 78.24 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 77.94 | silver quality |
| cingulate cortex | UBERON:0003027 | 77.72 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 77.65 | gold quality |
| endothelial cell | CL:0000115 | 77.56 | silver quality |
| ovary | UBERON:0000992 | 77.51 | gold quality |
| prefrontal cortex | UBERON:0000451 | 77.35 | gold quality |
| right ovary | UBERON:0002118 | 77.25 | gold quality |
| trachea | UBERON:0003126 | 76.76 | silver quality |
| thoracic aorta | UBERON:0001515 | 76.68 | gold quality |
| ascending aorta | UBERON:0001496 | 76.65 | gold quality |
| left uterine tube | UBERON:0001303 | 76.60 | gold quality |
| metanephros cortex | UBERON:0010533 | 76.57 | gold quality |
| neocortex | UBERON:0001950 | 76.52 | gold quality |
| frontal cortex | UBERON:0001870 | 76.51 | gold quality |
| right frontal lobe | UBERON:0002810 | 76.43 | gold quality |
| lower esophagus | UBERON:0013473 | 76.37 | gold quality |
| endocervix | UBERON:0000458 | 76.36 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 76.36 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 76.35 | gold quality |
| aorta | UBERON:0000947 | 76.31 | gold quality |
| myometrium | UBERON:0001296 | 76.28 | gold quality |
| fundus of stomach | UBERON:0001160 | 76.23 | gold quality |
| bronchus | UBERON:0002185 | 76.23 | gold quality |
| body of uterus | UBERON:0009853 | 76.17 | gold quality |
| epithelium of bronchus | UBERON:0002031 | 76.08 | gold quality |
| popliteal artery | UBERON:0002250 | 76.08 | gold quality |
| tibial artery | UBERON:0007610 | 76.08 | gold quality |
| superior surface of tongue | UBERON:0007371 | 76.03 | gold quality |
| inferior olivary complex | UBERON:0002127 | 75.92 | silver quality |
| connective tissue | UBERON:0002384 | 75.92 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 75.87 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 75.76 | gold quality |
| adipose tissue | UBERON:0001013 | 75.67 | gold quality |
| pylorus | UBERON:0001166 | 75.67 | gold quality |
| oocyte | CL:0000023 | 75.63 | silver quality |
| urinary bladder | UBERON:0001255 | 75.61 | gold quality |
| anatomical system | UBERON:0000467 | 75.60 | gold quality |
| material anatomical entity | UBERON:0000465 | 75.56 | gold quality |
| multicellular organism | UBERON:0000468 | 75.56 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 75.55 | gold quality |
| cerebral cortex | UBERON:0000956 | 75.53 | gold quality |
| vagina | UBERON:0000996 | 75.52 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-9067 | yes | 11.13 |
| E-ANND-3 | yes | 5.75 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 79 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Bone marrow | tissue | 44.2 | not detected |
| Lymph node | tissue | 42.3 | medium |
| Spleen | tissue | 31.8 | low |
| Appendix | tissue | 29.3 | medium |
| Tonsil | tissue | 27.8 | medium |
| Thymus | tissue | 23.7 | |
| Superior colliculi | tissue | 10.5 | |
| Thalamus | tissue | 10.3 | |
| Hippocampus | tissue | 9.0 | not detected |
| Midbrain | tissue | 8.8 | |
| Pons | tissue | 8.3 | |
| Frontal cortex | tissue | 8.0 | |
| Choroid plexus | tissue | 7.9 | |
| Lung | tissue | 7.2 | not detected |
| Locus coeruleus | tissue | 7.0 | |
| Spinal cord | tissue | 6.8 | |
| Urinary bladder | tissue | 6.4 | not detected |
| Medulla oblongata | tissue | 6.0 | |
| Gallbladder | tissue | 6.0 | low |
| Substantia nigra | tissue | 5.8 | |
| Small intestine | tissue | 5.8 | not detected |
| Postcentral gyrus | tissue | 5.8 | |
| Caudate putamen | tissue | 5.6 | |
| Stomach 1 | tissue | 5.2 | not detected |
| Hypothalamus | tissue | 4.8 | |
| Duodenum | tissue | 4.6 | not detected |
| Ovary | tissue | 4.4 | not detected |
| Vagina | tissue | 4.4 | not detected |
| Cerebral cortex | tissue | 4.3 | not detected |
| Periaqueductal gray | tissue | 4.3 | |
| Somatosensory cortex | tissue | 4.3 | |
| Salivary gland | tissue | 4.2 | not detected |
| Hippocampal formation | tissue | 4.2 | |
| Entorhinal cortex | tissue | 4.2 | |
| Insular cortex | tissue | 4.2 | |
| Adipose tissue | tissue | 4.1 | not detected |
| Nucleus accumbens | tissue | 4.1 | |
| Esophagus | tissue | 3.9 | not detected |
| Smooth muscle | tissue | 3.9 | not detected |
| Motor cortex | tissue | 3.8 | |
| Septum | tissue | 3.8 | |
| Temporal cortex | tissue | 3.8 | |
| Prefrontal cortex | tissue | 3.7 | |
| Amygdala | tissue | 3.7 | |
| Placenta | tissue | 3.6 | not detected |
| Corpus callosum | tissue | 3.6 | |
| Retrosplenial and cingulate cortex | tissue | 3.5 | |
| Retrosplenial cortex | tissue | 3.5 | |
| Testis | tissue | 3.4 | medium |
| Occipital cortex | tissue | 3.4 | |
| Ventral forebrain | tissue | 3.2 | |
| Colon | tissue | 3.1 | not detected |
| Fallopian tube | tissue | 3.1 | not detected |
| Endometrium 1 | tissue | 2.8 | not detected |
| Tongue | tissue | 2.8 | |
| Heart muscle | tissue | 2.6 | not detected |
| Parathyroid gland | tissue | 2.6 | not detected |
| Putamen | tissue | 2.6 | |
| Rectum | tissue | 2.5 | not detected |
| Pancreas | tissue | 2.5 | not detected |
Brain sub-regions (HPA Brain Atlas): detected in 189; highest nTPM — Anterior thalamic nucleus, ventral (14.1), Centromedial thalamic nucleus (14.0), Lateral funiculus (white matter) (11.8), Ventral posterolateral thalamic nucleus (11.0), Nuclei of the trapezoid body (10.8).
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): RUNX1
miRNA regulators (miRDB)
Targeting PIK3CD by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 73 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-6077 | 99.99 | 68.04 | 2299 |
| HSA-MIR-520G-5P | 99.99 | 66.76 | 658 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-4803 | 99.98 | 71.99 | 3117 |
| HSA-MIR-3682-5P | 99.93 | 67.97 | 1163 |
| HSA-MIR-3133 | 99.81 | 70.92 | 3506 |
| HSA-MIR-320A-3P | 99.77 | 69.73 | 2107 |
| HSA-MIR-320B | 99.77 | 69.73 | 2107 |
| HSA-MIR-320C | 99.77 | 69.73 | 2107 |
| HSA-MIR-320D | 99.77 | 69.73 | 2107 |
| HSA-MIR-4429 | 99.77 | 69.62 | 2111 |
| HSA-MIR-10393-3P | 99.72 | 66.56 | 961 |
| HSA-MIR-6801-5P | 99.72 | 66.50 | 981 |
| HSA-MIR-7-5P | 99.67 | 70.53 | 1809 |
| HSA-MIR-3158-5P | 99.65 | 67.51 | 1763 |
| HSA-MIR-5197-5P | 99.64 | 69.08 | 1494 |
Functional genomics
gnomAD constraint: pLI 1, LOEUF 0.23, missense Z 6.4 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD)
ENST00000377346 splits into 6 regions with different missense tolerance; 2 are missense-constrained (≈8% of the expected missense variation). Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD
| Region (GRCh38) | Missense obs / exp | o/e | Constrained |
|---|---|---|---|
| 1:9,710,456–9,721,822 | 592 / 920.6 | 0.64 | no |
| 1:9,721,823–9,721,982 | 1 / 20.5 | 0.05 | yes (p 1.7e-05) |
| 1:9,721,983–9,722,253 | 48 / 71.9 | 0.67 | no |
| 1:9,722,254–9,723,984 | 69 / 166.8 | 0.41 | no |
| 1:9,723,985–9,724,384 | 17 / 97.0 | 0.18 | yes (p 4.5e-16) |
| 1:9,724,385–9,727,043 | 60 / 129.5 | 0.46 | no |
Literature-anchored findings (GeneRIF, showing 40)
- PI3K delta can play a selective role in the amplification of phosphatidylinositol (3,4,5) trisphosphate (PIP3) levels that lead to neutrophil polarization and regulate directional migration, but not random locomotion. (PMID:12594293)
- p110delta isoform of PI3K is consistently expressed at a high level in blast cells from AML, in contrast to the other class I isoforms (PMID:15840695)
- Stimulation of TNF-alpha-primed human neutrophils with fMLP results in biphasic activation of PI3K; the first phase is largely dependent on PI3Kgamma; the second phase is largely dependent on PI3Kdelta and regulates parallel activation of ROS production (PMID:15878979)
- p110beta, -gamma, and -delta isoforms of class I phosphoinositide 3-kinase have roles in oncogenic transformation (PMID:16432180)
- These findings could shed light on further understanding the polymorphisms of p110delta in B-cell immunodeficiency and different populations. (PMID:16984281)
- p110delta contributes significantly to Th cell expansion and differentiation in vitro and in vivo, also in the context of CD28 costimulation. (PMID:17015696)
- This review describes the second-messenger PI3K delta signalling pathways that are involved in immune responses relevant to the pathogenesis of rheumatoid arthritis and other inflammatory diseases. (PMID:17290298)
- identifies the RhoA/ROCK pathway as a major target of p110delta-mediated PI3K signalling (PMID:17581634)
- novel function of the class I(A) PI3K isoform p110delta in neuroblastoma growth and survival. (PMID:18281552)
- These results demonstrate that CD148 may interact with and dephosphorylate p85 when it is phosphorylated and modulate the magnitude of phosphoinositide 3-kinase activity. (PMID:18348712)
- In contrast with PI3Kalpha, beta and gamma, PI3Kdelta accounts for most of the PI3K-dependent signaling ruling the production of IL-1beta, IL-6, TNF and sIL-1Ra in monocytes. (PMID:18471882)
- Results identify a conserved phosphoinositide 3-kinase p11delta promoter region that may account for the predominant leukocyte expression of p110delta. (PMID:19357769)
- RUNX1 may play a critical role in chemotherapy response in acute megakaryocytic leukemia by regulating the PI3-kinase/Akt pathway. (PMID:19638627)
- These studies establish that previously activated memory T cells are at least as sensitive to p110delta inhibition as naive T cells and show that mouse models accurately predict p110delta function in human T cells. (PMID:20081091)
- Data show that similar responses were seen in cancer cells with wild-type or activated mutant PI3K genes treated with p110alpha/delta or p110alpha/beta/delta inhibitors in cell viability assays. (PMID:20103642)
- PI3Kdelta expression and signaling is increased in the lungs of patients with COPD. (PMID:20381852)
- IFN-beta triggers an atypical MEK2/PI3Kdelta signaling cascade to regulate sIL-1Ra expression in monocytes. (PMID:20837746)
- These observations suggest that PI3Kdelta contributes to induction of enhanced systemic lupus erythematosus memory T cell survival (PMID:21810603)
- PI3K p110delta is important for TGFB1 induced production of the contractile proteins calponin and alpha-SMA and the proinflammatory cytokine IL-6 (PMID:22015454)
- p37delta appears to be a new tumor-specific isoform of p110delta with growth-promoting properties (PMID:22020336)
- Isoform specific targeting of PI3Kdelta may be beneficial in the treatment of glioblastoma multiforme by specifically inhibiting tumour cell migration capacity. (PMID:22079609)
- p110delta-dependent translocation of exogenous CSF-1 to the nucleus-associated CSF-1Rs, correlating with a prominent role of p110delta in activation of the Rab5 GTPase, a key regulator of endocytic trafficking (PMID:22084313)
- Findings suggest that excessive PI3Kdelta activity is characteristic in Hodgkin lymphoma (HL) and support clinical evaluation of GS-1101, alone and in combination, as targeted therapy for HL. (PMID:22210877)
- present a detailed biochemical and bioinformatic characterization of p110delta gene regulation, demonstrating that PIK3CD has distinct promoters, some of which can be dynamically activated by pro-inflammatory mediators (PMID:22375552)
- PI3 kinase delta is a key regulator of synoviocyte function in rheumatoid arthritis. (PMID:22433439)
- PIK3CD shows evidence of association with schizophrenia, and is a previously undescribed therapeutic target for the treatment of psychiatric disorders. (PMID:22689948)
- Studies indicate that the research with phosphoinositide 3-kinase p110-delta (p110delta) in chronic lymphocytic leukemia (CLL) have led to a more fundamental understanding of CLL signaling defects. (PMID:22711705)
- High PIK3CA/PIK3CD ratio identified a subset of primary mantle cell lymphomas resistant to GS-1101 and this ratio increased significantly with relapse. (PMID:23341541)
- The expression of PIK3CD is inversely correlated with miR-30a levels in metastatic colorectal carcinoma tissues. (PMID:23486085)
- These results suggest that PI3Kdelta mediates dsRNA-induced upregulation of B7-H1 without affecting the activation of NF-kappaB. (PMID:23660190)
- this study found E1021K in 17 patients with activated PI3K-delta syndrome (APDS), from seven unrelated families with, but not among 3346 healthy subjects. (PMID:24136356)
- Data indicate that patients with combined immunodeficiency disease who share gain-of-function mutations in PIK3CD (p110delta), resulting in hyperactivation of mTOR signaling and skewed the differentiation of CD8+ T cells. (PMID:24165795)
- Study reveals functional and mechanistic links between miRNA-30b and oncogene KRAS, PIK3CD and BCL2 in the pathogenesis of colorectal carcinoma. (PMID:24293274)
- PI3Kdelta contributes to multiple aspects of the pathogenic FLS behavior in RA. These observations, together with previous findings that PI3Kdelta regulates FLS growth and survival (PMID:24470496)
- PIK3CD is a target gene of miR-125b in Ewing’s sarcoma cells. RT-PCR and western blot assays identify over-expression of miR-125b that suppresses the expression of PIK3CD mRNA and protein. (PMID:24517182)
- PIK3CD was inversely correlated with miR-663 in glioblastoma specimens and predicted poor prognosis of patients with glioblastoma (PMID:24523440)
- Gestational diabetes mellitus is accompanied by leukocyte PIK3CD overexpression associated with reduced plasma LDL-C and TC levels, as well as with hyperglycaemia and elevated leukocyte SIRT1 mRNA. (PMID:24549598)
- PI3K p110delta uniquely promotes gain-of-function Shp2-induced GM-CSF hypersensitivity in a model of juvenile myelomonocytic leukemia. (PMID:24553178)
- Mutations in PIK3CD can cause hyper IgM syndrome (HIGM) associated with increased cancer susceptibility. (PMID:24610295)
- The p110delta PI3K-selective compound CAL-101 (Idelalisib) did not inhibit markers of PI3K activity in cancer or stromal cells. (PMID:24648465)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | pik3cd | ENSDARG00000003250 |
| mus_musculus | Pik3cd | ENSMUSG00000039936 |
| rattus_norvegicus | Pik3cd | ENSRNOG00000016846 |
| drosophila_melanogaster | Pi3K68D | FBGN0015278 |
| drosophila_melanogaster | Pi3K92E | FBGN0015279 |
| caenorhabditis_elegans | WBGENE00000090 | |
| caenorhabditis_elegans | WBGENE00009552 |
Paralogs (9): PIK3C2A (ENSG00000011405), PIK3CB (ENSG00000051382), PIK3C3 (ENSG00000078142), PIK3CG (ENSG00000105851), PIK3CA (ENSG00000121879), PIK3C2B (ENSG00000133056), PIK3C2G (ENSG00000139144), PI4KB (ENSG00000143393), PI4KA (ENSG00000241973)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:1098211) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 87 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| abnormal humoral immune response | 4 |
| decreased IgM level | 3 |
| decreased B-1 B cell number | 3 |
| decreased B cell proliferation | 3 |
| decreased IgG1 level | 3 |
| abnormal B cell differentiation | 2 |
| abnormal Peyer’s patch germinal center morphology | 2 |
| decreased immunoglobulin level | 2 |
| increased IgE level | 2 |
| increased lymphocyte cell number | 2 |
| decreased B cell number | 2 |
| decreased CD4-positive, alpha-beta T cell number | 2 |
| absent spleen germinal center | 2 |
| increased response to antigen | 2 |
| increased leukocyte cell number | 1 |
| increased neutrophil cell number | 1 |
| decreased leukocyte cell number | 1 |
| abnormal intestinal epithelium morphology | 1 |
| crypts of Lieberkuhn abscesses | 1 |
| abnormal small intestine morphology | 1 |
| abnormal intestinal mucosa morphology | 1 |
| lymphoid hyperplasia | 1 |
| enlarged spleen | 1 |
| small spleen | 1 |
| spleen hyperplasia | 1 |
+62 more (showing top 25).
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Bos taurus | P32871 | 99.8% | Diamond |
| Pongo abelii | Q5RAY1 | 98.6% | Diamond |
| Glycine max | P42347 | 97.9% | Diamond |
| Sus scrofa | O02697 | 94.9% | Diamond |
| Arabidopsis thaliana | Q0WPX9 | 85.7% | Diamond |
| Candida albicans SC5314 | Q9UW24 | 57.5% | Diamond |
| Dictyostelium discoideum | P54677 | 54.3% | Diamond |
| Saccharomyces cerevisiae S288C | P37297 | 45.1% | Diamond |
| Schizosaccharomyces pombe 972h- | P50520 | 43.5% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| PIK3CD-AS2 | ncRNA | 101929074 |
| PIK3CD-AS1 | ncRNA | 644997 |
| CLSTN1 | protein-coding | 22883 |
| TMEM201 | protein-coding | 199953 |
| SLC25A33 | protein-coding | 84275 |
| CTNNBIP1-AS1 | ncRNA | 139355239 |
| CTNNBIP1 | protein-coding | 56998 |
| NMNAT1 | protein-coding | 64802 |
| LZIC | protein-coding | 84328 |
| LINC02606 | ncRNA | 100506022 |
Protein
Protein identifiers
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform — O00329 (reviewed: O00329)
Alternative names: Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta
All UniProt accessions (9): A0A2K8FKV1, A0A8V8TM62, A0A8V8TML5, A0A8V8TMM0, A0A8V8TNP1, A0A8V8TNW9, B7ZM44, O00329, F8W9P4
UniProt curated annotations — full annotation on UniProt →
Function. Phosphoinositide-3-kinase (PI3K) phosphorylates phosphatidylinositol (PI) and its phosphorylated derivatives at position 3 of the inositol ring to produce 3-phosphoinositides. Uses ATP and PtdIns(4,5)P2 (phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Mediates immune responses. Plays a role in B-cell development, proliferation, migration, and function. Required for B-cell receptor (BCR) signaling. Mediates B-cell proliferation response to anti-IgM, anti-CD40 and IL4 stimulation. Promotes cytokine production in response to TLR4 and TLR9. Required for antibody class switch mediated by TLR9. Involved in the antigen presentation function of B-cells. Involved in B-cell chemotaxis in response to CXCL13 and sphingosine 1-phosphate (S1P). Required for proliferation, signaling and cytokine production of naive, effector and memory T-cells. Required for T-cell receptor (TCR) signaling. Mediates TCR signaling events at the immune synapse. Activation by TCR leads to antigen-dependent memory T-cell migration and retention to antigenic tissues. Together with PIK3CG participates in T-cell development. Contributes to T-helper cell expansion and differentiation. Required for T-cell migration mediated by homing receptors SELL/CD62L, CCR7 and S1PR1 and antigen dependent recruitment of T-cells. Together with PIK3CG is involved in natural killer (NK) cell development and migration towards the sites of inflammation. Participates in NK cell receptor activation. Plays a role in NK cell maturation and cytokine production. Together with PIK3CG is involved in neutrophil chemotaxis and extravasation. Together with PIK3CG participates in neutrophil respiratory burst. Plays important roles in mast-cell development and mast cell mediated allergic response. Involved in stem cell factor (SCF)-mediated proliferation, adhesion and migration. Required for allergen-IgE-induced degranulation and cytokine release. The lipid kinase activity is required for its biological function. Isoform 2 may be involved in stabilizing total RAS levels, resulting in increased ERK phosphorylation and increased PI3K activity.
Subunit / interactions. Heterodimer of a catalytic subunit PIK3CD and a p85 regulatory subunit (PIK3R1, PIK3R2 or PIK3R3). Interacts with ERAS. Interacts with HRAS. Interacts (via the catalytic domain) with FOXM1 isoform 5 (FOXM1D); FOXM1D also simultaneously binds to the PI3K regulatory subunit which relieves the inhibitory effect of the regulatory subunit on the kinase activity of the catalytic subunit.
Subcellular location. Cytoplasm.
Tissue specificity. In humans, the highest levels of expression are seen in peripheral blood mononuclear cells, spleen, and thymus, and low levels of expression in testes, uterus, colon, and small intestine but not in other tissues examined including prostate, heart, brain, and liver. Isoform 2 is expressed in normal thymus, lung and spleen tissues, and is detected at low levels in normal lysates from colon and ovarian biopsies, at elevated levels in lysates from colorectal tumors and is abundantly expressed in some ovarian tumors (at protein level). Both isoform 1 and isoform 2 are widely expressed. Isoform 1 is expressed predominantly in leukocytes.
Post-translational modifications. Autophosphorylation on Ser-1039 results in the almost complete inactivation of the lipid kinase activity.
Disease relevance. Immunodeficiency 14A with lymphoproliferation, autosomal dominant (IMD14A) [MIM:615513] A disorder characterized by recurrent respiratory infections, progressive airway damage, lymphopenia, increased circulating transitional B cells, increased immunoglobulin M, reduced immunoglobulin G2 levels in serum, and impaired vaccine responses. The disease is caused by variants affecting the gene represented in this entry. Immunodeficiency 14B, autosomal recessive (IMD14B) [MIM:619281] An autosomal recessive, primary immunodeficiency characterized by recurrent sinopulmonary infections apparent in early childhood. Some patients may develop inflammatory bowel disease or osteomyelitis. Immunological features include hypogammaglobulinemia, decreased levels of B cells, and evidence of impaired immune-mediated cytotoxicity and defective T-cell function. The disease is caused by variants affecting the gene represented in this entry. Roifman-Chitayat syndrome (ROCHIS) [MIM:613328] An autosomal recessive digenic disorder characterized by global developmental delay, variable neurologic features such as seizures and ataxia, optic atrophy, dysmorphic facial features, distal skeletal anomalies, and recurrent invasive infections due to combined immunodeficiency. The disease is caused by variants affecting distinct genetic loci, including the gene represented in this entry. Caused by the simultaneous occurrence of homozygous mutations in PIK3CD and KNSTRN.
Activity regulation. Activated by growth factors and cytokine receptors through a tyrosine-kinase-dependent mechanism. Activated by RAS. IC87114 inhibits lipid kinase activity and is selective in cells at doses up to 5-10 uM. IC87114 blocks T-cell receptor signaling in naive and memory T-cells and reduces cytokine production by memory T-cells.
Pathway. Phospholipid metabolism; phosphatidylinositol phosphate biosynthesis.
Miscellaneous. IC87114 inhibitor reduces passive cutaneous anaphylaxis, attenuates allergic airway inflammation and hyperresponsiveness and allergen induced rhinitis response. Inhibitors may have therapeutic potential for the treatment of immune system-mediated diseases such as auto-immune diseases, inflammation and allergy.
Similarity. Belongs to the PI3/PI4-kinase family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O00329-1 | 1, p110-delta | yes |
| O00329-2 | 2, p37-delta |
RefSeq proteins (7): NP_001337163, NP_001337164, NP_001424475, NP_001424476, NP_001425267, NP_001426135, NP_005017* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000341 | PI3K_Ras-bd_dom | Domain |
| IPR000403 | PI3/4_kinase_cat_dom | Domain |
| IPR001263 | PI3K_accessory_dom | Domain |
| IPR002420 | PI3K-type_C2_dom | Domain |
| IPR003113 | PI3K_ABD | Domain |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR015433 | PI3/4_kinase | Family |
| IPR016024 | ARM-type_fold | Homologous_superfamily |
| IPR018936 | PI3/4_kinase_CS | Conserved_site |
| IPR029071 | Ubiquitin-like_domsf | Homologous_superfamily |
| IPR035892 | C2_domain_sf | Homologous_superfamily |
| IPR036940 | PI3/4_kinase_cat_sf | Homologous_superfamily |
| IPR037703 | PI3-kinase_delta_cat | Domain |
| IPR042236 | PI3K_accessory_sf | Homologous_superfamily |
Pfam: PF00454, PF00613, PF00792, PF00794, PF02192
Enzyme classification (BRENDA)
- EC 2.7.1.137 — phosphatidylinositol 3-kinase (BRENDA: 29 organisms, 131 substrates, 146 inhibitors, 16 Km, 0 kcat entries)
- EC 2.7.1.153 — phosphatidylinositol-4,5-bisphosphate 3-kinase (BRENDA: 12 organisms, 48 substrates, 96 inhibitors, 1 Km, 0 kcat entries)
- EC 2.7.11.1 — non-specific serine/threonine protein kinase (BRENDA: 71 organisms, 682 substrates, 228 inhibitors, 23 Km, 6 kcat entries)
Substrate kinetics (BRENDA)
14 substrates with measured Km, best-characterized 14. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0007–0.64 | 11 |
| ATP | 0.03–44 | 7 |
| PHOSPHATIDYLINOSITOL | 0.034–64 | 3 |
| KKRAARATSNVFA | 0.013–0.045 | 3 |
| PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE | 0.004–15 | 2 |
| PHOSPHATIDYLINOSITOL 4-PHOSPHATE | 0.009–10 | 2 |
| PAH1 PHOSPHATIDATE PHOSPHATASE | 0.0002 | 2 |
| RRRLSSLRA | 0.0036–0.0037 | 2 |
| 1,2-DIOCTANOYLPHOSPHATIDYLINOSITOL 4,5-DIPHOSPHA | 0.05 | 1 |
| PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE | 0.011 | 1 |
| GTP | 0.46 | 1 |
| KKRAARASSNVFA | 0.02 | 1 |
| LYS-LYS-PHE-ASN-ARG-THR-LEU-SER-VAL-ALA | 0.0093 | 1 |
| MYELIN BASIC PROTEIN | 0.145 | 1 |
Catalyzed reactions (Rhea)
- a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + ATP = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3-phosphate) + ADP + H(+) (RHEA:12709)
- a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-4,5-bisphosphate) + ATP = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4,5-trisphosphate) + ADP + H(+) (RHEA:21292)
- 1-octadecanoyl-2-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-sn-glycero-3-phospho-1D-myo-inositol 4,5-bisphosphate + ATP = 1-octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phospho-(1D-myo-inositol 3,4,5-triphosphate) + ADP + H(+) (RHEA:43396)
UniProt features (125 total): helix 56, strand 40, turn 9, domain 5, region of interest 4, mutagenesis site 3, modified residue 2, splice variant 2, sequence variant 2, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
20 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 6PYR | Human PI3Kdelta in complex with Compound 2-10 … | X-RAY DIFFRACTION | 2.21 |
| 8S3R | HUMAN PI3KDELTA IN COMPLEX WITH PYRIDAZINONE INHIBITOR 7 | X-RAY DIFFRACTION | 2.28 |
| 7JIS | HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 2F | X-RAY DIFFRACTION | 2.42 |
| 8BCY | HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 13 | X-RAY DIFFRACTION | 2.43 |
| 9L3R | Human PI3KDELTA in complex with Zandelisib | X-RAY DIFFRACTION | 2.5 |
| 6PYU | Human PI3Kdelta in complex with Compound 4-2 … | X-RAY DIFFRACTION | 2.54 |
| 6OCO | HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 6 | X-RAY DIFFRACTION | 2.58 |
| 5DXU | p110delta/p85alpha with GDC-0326 | X-RAY DIFFRACTION | 2.64 |
| 6G6W | HUMAN PI3KDELTA IN COMPLEX WITH LIGAND LASW1976 | X-RAY DIFFRACTION | 2.72 |
| 9T07 | HUMAN PI3KDELTA IN COMPLEX WITH Roginolisib | X-RAY DIFFRACTION | 2.75 |
| 6OCU | HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 29 | X-RAY DIFFRACTION | 2.77 |
| 7LM2 | HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 3C | X-RAY DIFFRACTION | 2.79 |
| 5VLR | CRYSTAL STRUCTURE OF PI3K DELTA IN COMPLEX WITH A TRIFLUORO-ETHYL-PYRAZOL-PYROLOTRIAZINE … | X-RAY DIFFRACTION | 2.8 |
| 9GDI | HUMAN PI3KDELTA IN COMPLEX WITH ISOCUMARIN INHIBITOR 10 | X-RAY DIFFRACTION | 2.81 |
| 5UBT | CRYSTAL STRUCTURE OF PI3K DELTA IN COMPLEX WITH A … | X-RAY DIFFRACTION | 2.83 |
| 5M6U | HUMAN PI3KDELTA IN COMPLEX WITH LASW1579 | X-RAY DIFFRACTION | 2.85 |
| 9GCF | HUMAN PI3KDELTA IN COMPLEX WITH ISOCUMARIN INHIBITOR CHF-6523 | X-RAY DIFFRACTION | 2.89 |
| 5T8F | p110delta/p85alpha with taselisib (GDC-0032) | X-RAY DIFFRACTION | 2.91 |
| 7LQ1 | HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 28 | X-RAY DIFFRACTION | 2.96 |
| 9T1P | Human PI3Kdelta in complex with IOA-288 | X-RAY DIFFRACTION | 2.97 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O00329-F1 | 88.21 | 0.69 |
Human Protein Atlas
Protein class: Enzymes, ENZYME proteins, Transferases, Kinases, Atypical kinases, Metabolic proteins, Predicted intracellular proteins, RAS pathway related proteins, Disease related genes, FDA approved drug targets, Small molecule drugs, Human disease related genes, Primary immunodeficiency
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): vesicles; cytokinetic bridge; cytosol; microtubules; primary cilium; primary cilium tip
Antibody reliability (HPA): IH enhanced · IF approved
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (2)
| Type | Positions |
|---|---|
| Phosphotyrosine | 524 |
| Phosphoserine | 1039 |
Mutagenesis-validated functional residues (3)
| Position | Phenotype |
|---|---|
| 894 | abolishes lipid and protein kinase activities. |
| 1039 | abolishes autophosphorylation, no effect on lipid kinase activity. |
| 1039 | abolishes autophosphorylation, reduced lipid kinase activity. |
Function
Pathways and Gene Ontology
Reactome pathways
9 curated (TAS) of 39; 4 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
39 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-2219530 | Constitutive Signaling by Aberrant PI3K in Cancer ⚕ | curated |
| R-HSA-389357 | CD28 dependent PI3K/Akt signaling | curated |
| R-HSA-9927354 | Co-stimulation by ICOS | curated |
| R-HSA-912526 | Interleukin receptor SHC signaling | curated |
| R-HSA-512988 | Interleukin-3, Interleukin-5 and GM-CSF signaling | curated |
| R-HSA-6811558 | PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling | curated |
| R-HSA-1257604 | PIP3 activates AKT signaling | curated |
| R-HSA-8853659 | RET signaling | curated |
| R-HSA-1660499 | Synthesis of PIPs at the plasma membrane | curated |
| R-HSA-1643685 | Disease ⚕ | — |
| R-HSA-5663202 | Diseases of signal transduction by growth factor receptors and second messengers ⚕ | — |
| R-HSA-2219528 | PI3K/AKT Signaling in Cancer ⚕ | — |
| R-HSA-1280218 | Adaptive Immune System | — |
| R-HSA-983695 | Antigen activates B Cell Receptor (BCR) leading to generation of second messengers | electronic |
| R-HSA-422475 | Axon guidance | — |
| R-HSA-9855142 | Cellular responses to mechanical stimuli | — |
| R-HSA-8953897 | Cellular responses to stimuli | — |
| R-HSA-389356 | Co-stimulation by CD28 | — |
| R-HSA-1280215 | Cytokine Signaling in Immune system | — |
| R-HSA-1266738 | Developmental Biology | — |
| R-HSA-9027276 | Erythropoietin activates Phosphoinositide-3-kinase (PI3K) | electronic |
| R-HSA-9856530 | High laminar flow shear stress activates signaling by PIEZO1 and PECAM1:CDH5:KDR in endothelial cells | electronic |
| R-HSA-168256 | Immune System | — |
| R-HSA-451927 | Interleukin-2 family signaling | — |
| R-HSA-9006925 | Intracellular signaling by second messengers | — |
| R-HSA-1430728 | Metabolism | — |
| R-HSA-556833 | Metabolism of lipids | — |
| R-HSA-199418 | Negative regulation of the PI3K/AKT network | — |
| R-HSA-9675108 | Nervous system development | — |
| R-HSA-1483255 | PI Metabolism | — |
| R-HSA-1483257 | Phospholipid metabolism | — |
| R-HSA-388841 | Regulation of T cell activation by CD28 family | — |
| R-HSA-912631 | Regulation of signaling by CBL | electronic |
| R-HSA-9860931 | Response of endothelial cells to shear stress | — |
| R-HSA-162582 | Signal Transduction | — |
| R-HSA-9680350 | Signaling by CSF1 (M-CSF) in myeloid cells | electronic |
| R-HSA-9006335 | Signaling by Erythropoietin | — |
| R-HSA-449147 | Signaling by Interleukins | — |
| R-HSA-983705 | Signaling by the B Cell Receptor (BCR) | — |
MSigDB gene sets: 914 (showing top):
GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_MORPHOGENESIS_OF_AN_EPITHELIUM, GOBP_REGULATION_OF_CELL_ACTIVATION, REACTOME_INTERLEUKIN_2_FAMILY_SIGNALING, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_NATURAL_KILLER_CELL_DIFFERENTIATION, GOBP_PHOSPHATIDYLINOSITOL_METABOLIC_PROCESS, GOBP_VASCULAR_ENDOTHELIAL_GROWTH_FACTOR_SIGNALING_PATHWAY, GOBP_MYELOID_CELL_HOMEOSTASIS, PAX4_01, GOBP_MYELOID_LEUKOCYTE_MIGRATION, GOBP_CELL_CHEMOTAXIS, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_LEUKOCYTE_APOPTOTIC_PROCESS
GO Biological Process (49): natural killer cell differentiation (GO:0001779), positive regulation of cytokine production (GO:0001819), positive regulation of endothelial cell proliferation (GO:0001938), adaptive immune response (GO:0002250), mast cell chemotaxis (GO:0002551), respiratory burst involved in defense response (GO:0002679), protein phosphorylation (GO:0006468), inflammatory response (GO:0006954), immune response (GO:0006955), signal transduction (GO:0007165), positive regulation of endothelial cell migration (GO:0010595), positive regulation of gene expression (GO:0010628), T cell chemotaxis (GO:0010818), cell migration (GO:0016477), natural killer cell activation (GO:0030101), B cell differentiation (GO:0030183), T cell differentiation (GO:0030217), positive regulation of cell migration (GO:0030335), neutrophil chemotaxis (GO:0030593), T cell costimulation (GO:0031295), positive regulation of neutrophil apoptotic process (GO:0033031), natural killer cell chemotaxis (GO:0035747), B cell chemotaxis (GO:0035754), phosphatidylinositol-3-phosphate biosynthetic process (GO:0036092), vascular endothelial growth factor signaling pathway (GO:0038084), T cell activation (GO:0042110), B cell activation (GO:0042113), mast cell degranulation (GO:0043303), phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0043491), innate immune response (GO:0045087), positive regulation of angiogenesis (GO:0045766), phosphatidylinositol-mediated signaling (GO:0048015), T cell receptor signaling pathway (GO:0050852), B cell receptor signaling pathway (GO:0050853), mast cell differentiation (GO:0060374), neutrophil extravasation (GO:0072672), positive regulation of epithelial tube formation (GO:1905278), immune system process (GO:0002376), leukocyte mediated immunity (GO:0002443), lipid metabolic process (GO:0006629), chemotaxis (GO:0006935), cell surface receptor signaling pathway (GO:0007166), regulation of anatomical structure morphogenesis (GO:0022603), cell differentiation (GO:0030154), regulation of cell adhesion (GO:0030155), phosphatidylinositol phosphate biosynthetic process (GO:0046854), positive regulation of developmental process (GO:0051094), positive regulation of multicellular organismal process (GO:0051240), regulation of multicellular organismal development (GO:2000026)
GO Molecular Function (8): ATP binding (GO:0005524), 1-phosphatidylinositol-3-kinase activity (GO:0016303), 1-phosphatidylinositol-4-phosphate 3-kinase activity (GO:0035005), 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (GO:0046934), nucleotide binding (GO:0000166), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (5): cytoplasm (GO:0005737), cytosol (GO:0005829), plasma membrane (GO:0005886), phosphatidylinositol 3-kinase complex (GO:0005942), phosphatidylinositol 3-kinase complex, class IA (GO:0005943)
Reactome top-level categories
17 top-level categories:
| Category | Pathways |
|---|---|
| Interleukin-3, Interleukin-5 and GM-CSF signaling | 2 |
| Immune System | 2 |
| Intracellular signaling by second messengers | 1 |
| PI Metabolism | 1 |
| PI3K/AKT Signaling in Cancer | 1 |
| Co-stimulation by CD28 | 1 |
| Signaling by Interleukins | 1 |
| Negative regulation of the PI3K/AKT network | 1 |
| Axon guidance | 1 |
| Signaling by Erythropoietin | 1 |
| Interleukin-2 family signaling | 1 |
| Cytokine Signaling in Immune system | 1 |
| Signaling by the B Cell Receptor (BCR) | 1 |
| Response of endothelial cells to shear stress | 1 |
| Regulation of T cell activation by CD28 family | 1 |
| Phospholipid metabolism | 1 |
| Metabolism of lipids | 1 |
GO top-level categories
showing 60 of 62 GO namespaces:
| Category | Terms |
|---|---|
| lymphocyte differentiation | 3 |
| phosphatidylinositol kinase activity | 3 |
| defense response | 2 |
| cellular anatomical structure | 2 |
| natural killer cell activation | 1 |
| cytokine production | 1 |
| regulation of cytokine production | 1 |
| positive regulation of gene expression | 1 |
| positive regulation of multicellular organismal process | 1 |
| endothelial cell proliferation | 1 |
| regulation of endothelial cell proliferation | 1 |
| positive regulation of epithelial cell proliferation | 1 |
| immune response | 1 |
| leukocyte chemotaxis | 1 |
| mast cell migration | 1 |
| immune effector process | 1 |
| respiratory burst | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| immune system process | 1 |
| response to stimulus | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| regulation of endothelial cell migration | 1 |
| positive regulation of cell migration | 1 |
| endothelial cell migration | 1 |
| gene expression | 1 |
| regulation of gene expression | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| lymphocyte chemotaxis | 1 |
| T cell migration | 1 |
| cell motility | 1 |
| lymphocyte activation | 1 |
| B cell activation | 1 |
| T cell activation | 1 |
| cell migration | 1 |
| regulation of cell migration | 1 |
| positive regulation of cell motility | 1 |
| granulocyte chemotaxis | 1 |
| neutrophil migration | 1 |
| lymphocyte costimulation | 1 |
| positive regulation of T cell activation | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| anion binding | 1 |
| phosphatidylinositol-3-phosphate biosynthetic process | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
| membrane | 1 |
| cell periphery | 1 |
| extrinsic component of membrane | 1 |
| transferase complex, transferring phosphorus-containing groups | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 9 of 62 annotations. The rest are phylogenetic / computational / electronic (IEA).
9 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| phosphatidylinositol 3-kinase/protein kinase B signal transduction | BP | mutant phenotype |
| positive regulation of cell migration | BP | mutant phenotype |
| positive regulation of endothelial cell migration | BP | genetic interaction |
| positive regulation of endothelial cell proliferation | BP | genetic interaction |
| positive regulation of epithelial tube formation | BP | genetic interaction |
| positive regulation of gene expression | BP | mutant phenotype |
| positive regulation of neutrophil apoptotic process | BP | mutant phenotype |
| vascular endothelial growth factor signaling pathway | BP | genetic interaction |
| cytosol | CC | direct assay |
Protein interactions and networks
STRING
showing 15 of 9,893 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PIK3CD | AKT1 | P31749 | 977 |
| PIK3CD | PTEN | P60484 | 945 |
| PIK3CD | STAT3 | P40763 | 912 |
| PIK3CD | RPS6KB1 | P23443 | 911 |
| PIK3CD | SRC | P12931 | 908 |
| PIK3CD | INS | P01308 | 893 |
| PIK3CD | EGFR | P00533 | 882 |
| PIK3CD | MAPK3 | P27361 | 880 |
| PIK3CD | TP53 | P04637 | 880 |
| PIK3CD | BCL2 | P10415 | 880 |
| PIK3CD | TNF | P01375 | 865 |
| PIK3CD | CTNNB1 | P35222 | 859 |
| PIK3CD | GSK3B | P49841 | 858 |
| PIK3CD | TGFB1 | P01137 | 857 |
| PIK3CD | IL6 | P05231 | 857 |
IntAct
Human interaction partners of PIK3CD in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
11 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| PIK3R1 | direct interaction | 0.890 | 14 |
| PIK3R3 | association | 0.800 | 7 |
| HRAS | physical association | 0.400 | 2 |
| CD37 | physical association | 0.400 | 1 |
| NCK1 | physical association | 0.400 | 1 |
| DDR1 | association | 0.350 | 2 |
| SPP1 | association | 0.350 | 1 |
| ASCC2 | physical association | 0.000 | 1 |
| MCRIP2 | physical association | 0.000 | 1 |
| RALY | physical association | 0.000 | 1 |
| TNPO2 | physical association | 0.000 | 1 |
BioGRID (36 interactions; top human partners by supporting records): PIK3R1 (Affinity Capture-MS; 5 records), PIK3R2 (Reconstituted Complex; 3 records), PIK3R3 (Affinity Capture-MS; 3 records), PIK3CG (Reconstituted Complex; 2 records), TAGLN (Affinity Capture-Western; 2 records), AKT2 (Co-fractionation), AOC3 (Negative Genetic), ASCC2 (Two-hybrid), CAMK1D (Negative Genetic), CRK (Affinity Capture-MS), DBH (Negative Genetic), ERAS (Affinity Capture-Western), GRM2 (Negative Genetic), HRAS (Two-hybrid), IGF1R (Negative Genetic)
SIGNOR signaling
showing 27 of 28 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| ERBB3 | up-regulates | PIK3CD | binding |
| ERBB4 | up-regulates | PIK3CD | binding |
| IC-87114 | down-regulates | PIK3CD | “chemical inhibition” |
| HRAS | up-regulates | PIK3CD | binding |
| KRAS | up-regulates | PIK3CD | binding |
| dactolisib | down-regulates | PIK3CD | “chemical inhibition” |
| pictrelisib | down-regulates | PIK3CD | “chemical inhibition” |
| BKM120 | down-regulates | PIK3CD | “chemical inhibition” |
| idelalisib | down-regulates | PIK3CD | “chemical inhibition” |
| CH5132799 | down-regulates | PIK3CD | “chemical inhibition” |
| 1-[4-[[2-(2-amino-5-pyrimidinyl)-7-methyl-4-(4-morpholinyl)-6-thieno[3,2-d]pyrimidinyl]methyl]-1-piperazinyl]-2-hydroxy-1-propanone | down-regulates | PIK3CD | “chemical inhibition” |
| GSK1059615 | down-regulates | PIK3CD | “chemical inhibition” |
| GSK2126458 | down-regulates | PIK3CD | “chemical inhibition” |
| PI-103 | down-regulates | PIK3CD | “chemical inhibition” |
| PIK-294 | down-regulates | PIK3CD | “chemical inhibition” |
| PIK-90 | down-regulates | PIK3CD | “chemical inhibition” |
| PKI-402 | down-regulates | PIK3CD | “chemical inhibition” |
| PP121 | down-regulates | PIK3CD | “chemical inhibition” |
| 3-[2,4-diamino-7-(3-hydroxyphenyl)-6-pteridinyl]phenol | down-regulates | PIK3CD | “chemical inhibition” |
| XL765 | down-regulates | PIK3CD | “chemical inhibition” |
| ZSTK-474 | down-regulates | PIK3CD | “chemical inhibition” |
| ITGB4 | up-regulates | PIK3CD | binding |
| PIK3CD | down-regulates | PIK3CD | phosphorylation |
| TNF | up-regulates | PIK3CD | |
| PIK3R1 | “up-regulates activity” | PIK3CD | binding |
| PIK3CD | up-regulates | Survival | |
| PI3K | “up-regulates activity” | PIK3CD | binding |
Protein complexes (CORUM) (2)
Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).
2 complexes by size:
| Complex | Subunits | Members |
|---|---|---|
| ★ PIK3CD-PIK3R1 complex | 2 | PIK3CD, PIK3R1 |
| ★ PIK3CD-PIK3R2 complex | 2 | PIK3CD, PIK3R2 |
Disease & clinical
Genetic variants
Variant evidence for PIK3CD: 968 ClinVar records (33 pathogenic / likely pathogenic); 54 ClinGen expert-panel interpretations; 9 GWAS associations. Per-variant detail is on Sugi Variant.
ClinVar
968 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 19 |
| Likely pathogenic | 14 |
| Uncertain significance | 370 |
| Likely benign | 465 |
| Benign | 39 |
Top pathogenic / likely-pathogenic (15)
Showing the 15 best-reviewed of 33 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 88675 | NM_005026.5(PIK3CD):c.3061G>A (p.Glu1021Lys) | Pathogenic | reviewed by expert panel | 34 |
| 132807 | NM_005026.5(PIK3CD):c.1573G>A (p.Glu525Lys) | Pathogenic | reviewed by expert panel | 6 |
| 422410 | NM_005026.5(PIK3CD):c.3074A>G (p.Glu1025Gly) | Pathogenic | reviewed by expert panel | 3 |
| 582515 | NM_005026.5(PIK3CD):c.1574A>G (p.Glu525Gly) | Likely pathogenic | reviewed by expert panel | 4 |
| 132806 | NM_005026.5(PIK3CD):c.1002C>A (p.Asn334Lys) | Likely pathogenic | reviewed by expert panel | 3 |
| 1406866 | NM_005026.5(PIK3CD):c.1570T>A (p.Tyr524Asn) | Likely pathogenic | reviewed by expert panel | 3 |
| 578525 | NM_005026.5(PIK3CD):c.1002C>G (p.Asn334Lys) | Likely pathogenic | reviewed by expert panel | 2 |
| 1457684 | NM_005026.5(PIK3CD):c.1571A>C (p.Tyr524Ser) | Likely pathogenic | reviewed by expert panel | 2 |
| 2733822 | NM_005026.5(PIK3CD):c.371G>A (p.Gly124Asp) | Likely pathogenic | reviewed by expert panel | 2 |
| 4684966 | NM_005026.5(PIK3CD):c.241G>A (p.Glu81Lys) | Likely pathogenic | reviewed by expert panel | 1 |
| 4684967 | NM_005026.5(PIK3CD):c.1574A>C (p.Glu525Ala) | Likely pathogenic | reviewed by expert panel | 1 |
| 541084 | NM_005026.5(PIK3CD):c.236_237del (p.Gln79fs) | Pathogenic | criteria provided, single submitter | 1 |
| 1500652 | NM_005026.5(PIK3CD):c.171_178del (p.Leu58fs) | Pathogenic | criteria provided, single submitter | 1 |
| 2077526 | NM_005026.5(PIK3CD):c.767dup (p.Cys257fs) | Pathogenic | criteria provided, single submitter | 1 |
| 2699590 | NM_005026.5(PIK3CD):c.2164G>T (p.Glu722Ter) | Pathogenic | criteria provided, single submitter | 1 |
Per-variant reference — Sugi Variant
Explore PIK3CD’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
ClinGen expert-panel interpretations (54)
Expert ACMG interpretations from Antibody Deficiencies VCEP for immunodeficiency 14 — a higher-authority tier than individual ClinVar submissions.
| Assertion | Variants |
|---|---|
| Pathogenic | 3 |
| Likely Pathogenic | 9 |
| Uncertain Significance | 18 |
| Likely Benign | 19 |
| Benign | 5 |
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 37 predictions of 2,174):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 1:9653345 | donor_gain | 1.0000 | |
| 1:9691572–9691573 | donor_loss | 1.0000 | 5 |
| 1:9710417 | acceptor_gain | 1.0000 | |
| 1:9710422–9710423 | acceptor_loss | 1.0000 | 6 |
| 1:9710597–9710598 | donor_loss | 1.0000 | 4 |
| 1:9715770–9715771 | donor_loss | 1.0000 | 3 |
| 1:9716059 | donor_gain | 1.0000 | |
| 1:9716438–9716439 | acceptor_loss | 1.0000 | 6 |
| 1:9716620–9716621 | donor_loss | 1.0000 | 5 |
| 1:9717109–9717110 | donor_loss | 1.0000 | 5 |
AlphaMissense
2,483 missense substitutions predicted likely pathogenic (of 6,879 scored), across 630 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M900 | 9 | 0.970 | 0.999 |
| M797 | 9 | 0.931 | 0.993 |
| M756 | 9 | 0.886 | 0.995 |
| D911 | 8 | 0.999 | 1.000 |
| D787 | 8 | 0.998 | 0.999 |
| D893 | 8 | 0.998 | 1.000 |
| N898 | 8 | 0.998 | 1.000 |
| H895 | 8 | 0.997 | 0.999 |
| H909 | 8 | 0.997 | 1.000 |
| D937 | 8 | 0.997 | 1.000 |
| H1036 | 8 | 0.997 | 1.000 |
| F932 | 8 | 0.996 | 1.000 |
| F875 | 8 | 0.994 | 1.000 |
| D897 | 8 | 0.991 | 0.999 |
| F956 | 8 | 0.991 | 1.000 |
| H914 | 8 | 0.990 | 0.999 |
| F938 | 8 | 0.990 | 0.999 |
| D782 | 8 | 0.989 | 0.997 |
| F850 | 8 | 0.989 | 0.999 |
| F1015 | 8 | 0.988 | 0.999 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
2 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Papillary Cell Carcinoma (TCGA) | favorable | 5.14e-05 |
| Pancreatic Adenocarcinoma (validation) | unfavorable | 0.000214 |
Disease associations
OMIM: gene MIM:602839 | disease phenotypes: MIM:613328, MIM:619281, MIM:615513
GenCC curated gene-disease
2 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| immunodeficiency 14 | Definitive | Autosomal dominant | 3 |
| immunodeficiency 14b, autosomal recessive | Strong | Autosomal recessive | 3 |
ClinGen Gene-Disease Validity
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
2 validity classifications:
| Disease | Classification | Inheritance |
|---|---|---|
| immunodeficiency 14b, autosomal recessive | Definitive | AR |
| immunodeficiency 14 | Definitive | AD |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (6 panels, 5 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
6 panels:
| Panel | Rating |
|---|---|
| COVID-19 research | green |
| Infantile enterocolitis & monogenic inflammatory bowel disease | green |
| Non-CF bronchiectasis | green |
| Primary immunodeficiency or monogenic inflammatory bowel disease | green |
| Respiratory ciliopathies including non-CF bronchiectasis | green |
| Gastrointestinal epithelial barrier disorders | amber |
Mondo (3): combined immunodeficiency with faciooculoskeletal anomalies (MONDO:0013226), immunodeficiency 14b, autosomal recessive (MONDO:0023655), immunodeficiency 14 (MONDO:0014222)
Orphanet (4): Combined immunodeficiency with facio-oculo-skeletal anomalies (Orphanet:221139), Activated PI3K-delta syndrome (Orphanet:397596), Activated PI3K-delta syndrome 1 (Orphanet:693661), Moyamoya angiopathy (Orphanet:477768)
HPO phenotypes
showing 60 of 142 phenotypes (HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000010 | Recurrent urinary tract infections |
| HP:0000086 | Ectopic kidney |
| HP:0000122 | Unilateral renal agenesis |
| HP:0000218 | High palate |
| HP:0000246 | Sinusitis |
| HP:0000286 | Epicanthus |
| HP:0000306 | Abnormality of the chin |
| HP:0000316 | Hypertelorism |
| HP:0000348 | High forehead |
| HP:0000377 | Abnormal pinna morphology |
| HP:0000389 | Chronic otitis media |
| HP:0000411 | Protruding ear |
| HP:0000431 | Wide nasal bridge |
| HP:0000455 | Broad nasal tip |
| HP:0000463 | Anteverted nares |
| HP:0000470 | Short neck |
| HP:0000490 | Deeply set eye |
| HP:0000509 | Conjunctivitis |
| HP:0000609 | Optic nerve hypoplasia |
| HP:0000620 | Dacryocystitis |
| HP:0000648 | Optic atrophy |
| HP:0000924 | Abnormality of the skeletal system |
| HP:0000938 | Osteopenia |
| HP:0000953 | Hyperpigmentation of the skin |
| HP:0000988 | Skin rash |
| HP:0000998 | Hypertrichosis |
| HP:0001249 | Intellectual disability |
| HP:0001251 | Ataxia |
| HP:0001263 | Global developmental delay |
| HP:0001287 | Meningitis |
| HP:0001319 | Neonatal hypotonia |
| HP:0001369 | Arthritis |
| HP:0001508 | Failure to thrive |
| HP:0001537 | Umbilical hernia |
| HP:0001581 | Recurrent skin infections |
| HP:0001744 | Splenomegaly |
| HP:0001761 | Pes cavus |
| HP:0001875 | Decreased total neutrophil count |
| HP:0001894 | Thrombocytosis |
| HP:0001944 | Dehydration |
| HP:0001945 | Fever |
| HP:0001974 | Increased total leukocyte count |
| HP:0001999 | Abnormal facial shape |
| HP:0002007 | Frontal bossing |
| HP:0002014 | Diarrhea |
| HP:0002020 | Gastroesophageal reflux |
| HP:0002024 | Malabsorption |
| HP:0002028 | Chronic diarrhea |
| HP:0002037 | Inflammation of the large intestine |
| HP:0002058 | Myopathic facies |
| HP:0002080 | Intention tremor |
| HP:0002090 | Pneumonia |
| HP:0002100 | Recurrent aspiration pneumonia |
| HP:0002110 | Bronchiectasis |
| HP:0002119 | Ventriculomegaly |
| HP:0002123 | Generalized myoclonic seizure |
| HP:0002162 | Low posterior hairline |
| HP:0002205 | Recurrent respiratory infections |
GWAS associations
9 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST90002381_410 | Eosinophil count | 3e-27 |
| GCST90002382_5 | Eosinophil percentage of white cells | 2e-19 |
| GCST90002393_671 | Monocyte count | 2e-19 |
| GCST004635_1 | Testicular germ cell tumor | 6e-13 |
| GCST004625_2 | Monocyte count | 2e-9 |
| GCST90002388_382 | Lymphocyte count | 4e-9 |
| GCST002875_88 | Diisocyanate-induced asthma | 1e-6 |
| GCST008888_1 | Systemising | 1e-6 |
| GCST006304_1 | Irritable bowel syndrome | 3e-6 |
EFO canonical traits (from GWAS)
6 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0006995 | response to diisocyanate |
| EFO:0005091 | monocyte count |
| EFO:0010221 | systemising measurement |
| EFO:0004842 | eosinophil count |
| EFO:0007991 | eosinophil percentage of leukocytes |
| EFO:0004587 | lymphocyte count |
MeSH disease descriptors
1 disease descriptors:
| Descriptor | Name | Tree numbers |
|---|---|---|
| C567641 | Roifman-Chitayat Syndrome *(supp.)* |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (7): CHEMBL2111432 (PROTEIN COMPLEX), CHEMBL3130 (SINGLE PROTEIN), CHEMBL3559703 (PROTEIN COMPLEX GROUP), CHEMBL3885617 (PROTEIN FAMILY), CHEMBL6193791 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195501 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195549 (PROTEIN-PROTEIN INTERACTION)
Drugs by curated mechanism of action (ChEMBL)
Drugs whose curated ChEMBL mechanism of action targets the PIK3CD protein itself — single-protein targets only (drugs acting on a protein family or complex that merely includes it are excluded). Includes antibodies and oligonucleotides that bioactivity screening does not capture.
18 curated-mechanism drugs:
| Drug | Modality | Max phase |
|---|---|---|
| COPANLISIB | Small molecule | 4 |
| DUVELISIB MONOHYDRATE | Small molecule | 4 |
| IDELALISIB | Small molecule | 4 |
| LENIOLISIB | Small molecule | 4 |
| UMBRALISIB TOSYLATE | Small molecule | 4 |
| PARSACLISIB | Small molecule | 3 |
| ZANDELISIB | Small molecule | 3 |
| ACALISIB | Small molecule | 2 |
| AMG-319 | Small molecule | 2 |
| FIMEPINOSTAT | Small molecule | 2 |
| GSK-2269557 | Small molecule | 2 |
| INCB-40093 | Unknown | 2 |
| NEMIRALISIB | Small molecule | 2 |
| SELETALISIB | Small molecule | 2 |
| TENALISIB | Small molecule | 2 |
| TG100-115 | Small molecule | 2 |
| AZD-8186 | Small molecule | 1 |
| CAL-263 | Unknown | 1 |
Drugs acting on a complex or family that includes this protein
Curated ChEMBL mechanism-of-action drugs whose target is a protein complex or family of ≤10 members that includes PIK3CD — the drug acts on the assembly or class, not necessarily on this subunit alone.
26 drugs via a complex or family:
| Drug | Target (ChEMBL) | Members | Max phase |
|---|---|---|---|
| BUPARLISIB | PI3-kinase class I | 8 | 3 |
| DACTOLISIB | PI3-kinase class I | 8 | 3 |
| GEDATOLISIB | PI3-kinase class I | 8 | 3 |
| TASELISIB | PI3-kinase class I | 8 | 3 |
| APITOLISIB | PI3-kinase class I | 8 | 2 |
| AZD-6482 | PI3-kinase class I | 8 | 2 |
| BGT-226 | PI3-kinase class I | 8 | 2 |
| IZORLISIB | PI3-kinase class I | 8 | 2 |
| OMIPALISIB | PI3-kinase class I | 8 | 2 |
| PANULISIB | PI3-kinase class I | 8 | 2 |
| PAXALISIB | PI3-kinase class I | 8 | 2 |
| PF-04691502 | PI3-kinase class I | 8 | 2 |
| PICTILISIB | PI3-kinase class I | 8 | 2 |
| PILARALISIB | PI3-kinase class I | 8 | 2 |
| RECILISIB | PI3-kinase class I | 8 | 2 |
| SAMOTOLISIB | PI3-kinase class I | 8 | 2 |
| SF-1126 | PI3-kinase class I | 8 | 2 |
| SONOLISIB | PI3-kinase class I | 8 | 2 |
| VOXTALISIB | PI3-kinase class I | 8 | 2 |
| ZSTK-474 | PI3-kinase class I | 8 | 2 |
| DS-7423 | PI3-kinase class I | 8 | 1 |
| GSK-1059615 | PI3-kinase class I | 8 | 1 |
| PUQUITINIB MESYLATE DIHYDRATE | PI3-kinase class I | 8 | 1 |
| PWT-33587 | PI3-kinase class I | 8 | 1 |
| VS-5584 | PI3-kinase class I | 8 | 1 |
| WX-037 | PI3-kinase class I | 8 | 1 |
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 342,127 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
showing 60 of 66 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL3218576 | COPANLISIB | 4 | 4,784 |
| CHEMBL3545068 | COPANLISIB HYDROCHLORIDE | 4 | 1,392 |
| CHEMBL3039502 | DUVELISIB | 4 | 5,625 |
| CHEMBL2216870 | IDELALISIB | 4 | 10,756 |
| CHEMBL3643413 | LENIOLISIB | 4 | 379 |
| CHEMBL3948730 | UMBRALISIB | 4 | 3,004 |
| CHEMBL2396661 | ALPELISIB | 4 | 6,400 |
| CHEMBL113 | CAFFEINE | 4 | 202,768 |
| CHEMBL5416410 | DASATINIB | 4 | 674 |
| CHEMBL4650215 | INAVOLISIB | 4 | 937 |
| CHEMBL535 | SUNITINIB | 4 | 80,232 |
| CHEMBL1355736 | THEOPHYLLINE | 4 | 754 |
| CHEMBL4297615 | PARSACLISIB | 3 | 712 |
| CHEMBL2017974 | BUPARLISIB | 3 | 6,850 |
| CHEMBL1879463 | DACTOLISIB | 3 | 8,349 |
| CHEMBL592445 | GEDATOLISIB | 3 | 3,340 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL5095079 | POVORCITINIB | 3 | 237 |
| CHEMBL2387080 | TASELISIB | 3 | 3,643 |
| CHEMBL4303323 | ACALISIB | 2 | 1,291 |
| CHEMBL4303596 | AMG-319 | 2 | |
| CHEMBL3622533 | FIMEPINOSTAT | 2 | |
| CHEMBL2216859 | NEMIRALISIB | 2 | |
| CHEMBL4297648 | SELETALISIB | 2 | |
| CHEMBL4297584 | TENALISIB | 2 | |
| CHEMBL230011 | TG100-115 | 2 | |
| CHEMBL4438249 | AMDIZALISIB | 2 | |
| CHEMBL1922094 | APITOLISIB | 2 | |
| CHEMBL2165191 | AZD-6482 | 2 | |
| CHEMBL4558527 | AZD-8154 | 2 | |
| CHEMBL3218578 | BGT-226 FREE BASE | 2 | |
| CHEMBL513909 | BI-2536 | 2 | |
| CHEMBL4084907 | BIMIRALISIB | 2 | |
| CHEMBL2216863 | DEZAPELISIB | 2 | |
| CHEMBL3984425 | EGANELISIB | 2 | |
| CHEMBL3188551 | GSK-2636771 | 2 | |
| CHEMBL1684984 | IZORLISIB | 2 | |
| CHEMBL4574601 | LINPERLISIB | 2 | |
| CHEMBL3115681 | NARAZACICLIB | 2 | |
| CHEMBL1236962 | OMIPALISIB | 2 | |
| CHEMBL3586404 | ONATASERTIB | 2 | |
| CHEMBL3813842 | PAXALISIB | 2 | |
| CHEMBL1234354 | PF-04691502 | 2 | |
| CHEMBL521851 | PICTILISIB | 2 | |
| CHEMBL3360203 | PILARALISIB | 2 | |
| CHEMBL2105763 | QUISINOSTAT | 2 | |
| CHEMBL475251 | R-406 | 2 | |
| CHEMBL4800252 | RISOVALISIB | 2 | |
| CHEMBL3683575 | ROGINOLISIB | 2 | |
| CHEMBL4297181 | SAMOTOLISIB | 2 | |
| CHEMBL3545097 | SAPANISERTIB | 2 | |
| CHEMBL3935857 | SERABELISIB | 2 | |
| CHEMBL411907 | SONOLISIB | 2 | |
| CHEMBL2336325 | VISTUSERTIB | 2 | |
| CHEMBL3545366 | VOXTALISIB | 2 | |
| CHEMBL586702 | ZSTK-474 | 2 | |
| CHEMBL3408248 | AZD-8186 | 1 | |
| CHEMBL4439259 | AZD-7648 | 1 | |
| CHEMBL3928407 | GS-9901 | 1 | |
| CHEMBL3544966 | GSK-1059615 | 1 |
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Phosphatidylinositol kinases
Most potent curated ligand interactions (78 total), top 25:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| GSK2292767 | Inhibition | 10.1 | pKi |
| taselisib | Inhibition | 10.1 | pKi |
| KU-0060648 | Inhibition | 10.0 | pIC50 |
| nemiralisib | Inhibition | 9.9 | pIC50 |
| PF-06843195 | Inhibition | 9.55 | pKi |
| amdizalisib | Inhibition | 9.52 | pIC50 |
| compound 15a [PMID: 32069401] | Inhibition | 9.3 | pIC50 |
| compound 20f [PMID: 28520415] | Inhibition | 9.2 | pIC50 |
| AZD8154 | Inhibition | 9.15 | pIC50 |
| copanlisib | Inhibition | 9.15 | pIC50 |
| compound (S)-29 [PMID: 37606563] | Inhibition | 9.1 | pIC50 |
| compound 5d [PMID: 31335136] | Inhibition | 8.96 | pIC50 |
| compound 82 [PMID: 21332118] | Inhibition | 8.92 | pKi |
| compound 52 [PMID: 28541707] | Inhibition | 8.77 | pIC50 |
| CHF-6523 | Inhibition | 8.77 | pIC50 |
| bosmolisib | Inhibition | 8.7 | pIC50 |
| linperlisib | Inhibition | 8.62 | pIC50 |
| RV6153 | Inhibition | 8.6 | pIC50 |
| idelalisib | Inhibition | 8.6 | pIC50 |
| duvelisib | Inhibition | 8.6 | pIC50 |
| pictilisib | Inhibition | 8.52 | pIC50 |
| PI-103 | Inhibition | 8.52 | pIC50 |
| puquitinib | Inhibition | 8.48 | pIC50 |
| compound 2q [PMID: 30986068] | Inhibition | 8.41 | pIC50 |
| panulisib | Inhibition | 8.4 | pIC50 |
Binding affinities (BindingDB)
3929 measured of 6097 human assays (6100 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| methyl (3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-(hydroxymethyl)pyrrolidine-1-carboxylate | KI | 0.019 nM | US-9758538: Pyrimidine derivatives |
| 2,2-difluoroethyl (3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-(hydroxymethyl)pyrrolidine-1-carboxylate | KI | 0.021 nM | US-9758538: Pyrimidine derivatives |
| 2-amino-1-[(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]-2-methylpropan-1-one | KI | 0.023 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| (2S)-2-[[2-[2-(2,2,2-trifluoroethyl)-1,2,4-triazol-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]propanamide | KI | 0.023 nM | US-10112932: Benzoxazepin oxazolidinone compounds and methods of use |
| 5-[7-[(3S)-3-methyl-1-methylsulfonylpyrrolidin-3-yl]-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-4-yl]pyrimidin-2-amine | KI | 0.027 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| methyl (3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidine-1-carboxylate | KI | 0.03 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| 1-[(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]-2-hydroxy-2-methylpropan-1-one | KI | 0.03 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| (2S)-2-[[2-[(4S)-4-(fluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]propanamide | KI | 0.04 nM | US-10112932: Benzoxazepin oxazolidinone compounds and methods of use |
| 9-[1-methyl-5-[(3R)-4-methyl-3-propan-2-ylpiperazin-1-yl]pyrazol-4-yl]-2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepine | IC50 | 0.048 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
| (2S)-2-[[2-[(4S)-4-(difluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]butanamide | KI | 0.048 nM | US-10112932: Benzoxazepin oxazolidinone compounds and methods of use |
| (2S)-2-cyclopropyl-2-[[2-[(4S)-4-(fluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]acetamide | KI | 0.051 nM | US-10112932: Benzoxazepin oxazolidinone compounds and methods of use |
| (2S)-2-cyclopropyl-2-[[2-[(4S)-4-(difluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]acetamide | KI | 0.06 nM | US-10112932: Benzoxazepin oxazolidinone compounds and methods of use |
| 1-[(3R)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]ethanone | KI | 0.078 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| tert-butyl (3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-methylpyrrolidine-1-carboxylate | KI | 0.095 nM | US-9758538: Pyrimidine derivatives |
| 12-[2-(1-methylpiperidin-2-yl)pyrrolidin-1-yl]-4-[5-methyl-2-(2,2,2-trifluoroethyl)-1,2,4-triazol-3-yl]-9-oxa-3,6,13-triazatricyclo[8.4.0.02,6]tetradeca-1(14),2,4,10,12-pentaene | IC50 | 0.102 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
| (2S)-2-[methyl-[2-(2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]propanamide | KI | 0.107 nM | US-10112932: Benzoxazepin oxazolidinone compounds and methods of use |
| (3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-N-methylpyrrolidine-1-sulfonamide | KI | 0.124 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| (3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-N,3-dimethylpyrrolidine-1-carboxamide | KI | 0.124 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| 1-[(3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-(hydroxymethyl)pyrrolidin-1-yl]-2-methylpropan-1-one | KI | 0.135 nM | US-9758538: Pyrimidine derivatives |
| 5-[7-[(3S)-1-methylsulfonylpyrrolidin-3-yl]-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-4-yl]pyrimidin-2-amine | KI | 0.153 nM | US-9260439: Dihydropyrrolopyrimidine derivatives |
| 2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-9-[2-[(3R)-1-propan-2-ylpiperidin-3-yl]azetidin-1-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepine | IC50 | 0.16 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
| 9-(9-methyl-1,9-diazaspiro[4.5]decan-1-yl)-2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepine | IC50 | 0.178 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
| (2S)-2-[[2-[2-(2,2,2-trifluoroethyl)-1,2,4-triazol-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]oxy]propanamide | KI | 0.186 nM | US-10112932: Benzoxazepin oxazolidinone compounds and methods of use |
| 2-[(1S)-1-[[6-amino-5-(2H-tetrazol-5-yl)pyrimidin-4-yl]amino]ethyl]-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-4-one | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| 5-methyl-3-phenyl-2-[(1S)-1-[[5-(1H-pyrrolo[2,3-b]pyridin-5-yl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino]ethyl]-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-4-one | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| 2-[(1S)-1-[[5-[1-(3-hydroxypropyl)pyrazol-4-yl]-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino]ethyl]-5-methyl-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-4-one | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| US9388189, 145 | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| N-[5-[4-amino-6-[[(1S)-1-(5-methyl-4-oxo-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-2-yl)ethyl]amino]pyrimidin-5-yl]-2-methoxy-3-pyridinyl]-4-hydroxybenzenesulfonamide | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| US9388189, 163 | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| [3-hydroxy-5-(methanesulfonamido)phenyl] 4-amino-6-[[(1S)-1-(5-methyl-4-oxo-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-2-yl)ethyl]amino]pyrimidine-5-carboxylate | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| N-[6-[4-[[(1S)-1-(5-methyl-4-oxo-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-2-yl)ethyl]amino]-7H-pyrrolo[2,3-d]pyrimidin-5-yl]-1H-indol-4-yl]methanesulfonamide | IC50 | 0.2 nM | US-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors |
| (S)-4-acetyl-1-(5-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-fluorophenyl)-3,3,6- trimethylpiperazin-2-one | IC50 | 0.2 nM | US-10214537 |
| (S)-4-acetyl-1-(5-(4-amino-5- chloropyrrolo[2,1-f][1,2,4]triazin-7- yl)-2-fluorophenyl)-3,3,6- trimethylpiperazin-2-one | IC50 | 0.2 nM | US-10214537 |
| (S)-4-acetyl-1-(5-(4-amino-5-(1-((S)- 1,1,1-trifluoropropan-2-yl)-1H- pyrazol-5-yl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-fluorophenyl)-3,3,6- trimethylpiperazin-2-one | IC50 | 0.2 nM | US-10214537 |
| (S)-4-acetyl-1-(5-(4-amino-5-(1- methyl-1H-pyrazol-4-yl)pyrrolo[2,1-f] [1,2,4]triazin-7-yl)-2-fluorophenyl)- 3,3,6-trimethylpiperazin-2-one | IC50 | 0.2 nM | US-10214537 |
| 2-(4-acetyl-3-ethyl-3-methyl-2- oxopiperazin-1-yl)-4-(4-amino-5- chloropyrrolo[2,1-f][1,2,4]triazin-7- yl)benzonitrile | IC50 | 0.2 nM | US-10214537 |
| (R)-2-(4-acetyl-3-ethyl-3-methyl-2- oxopiperazin-1-yl)-4-(4-amino-5- chloropyrrolo[2,1-f][1,2,4]triazin-7- yl)benzonitrile | IC50 | 0.2 nM | US-10214537 |
| (S)-2-(4-acetyl-3-ethyl-3-methyl-2- oxopiperazin-1-yl)-4-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)benzonitrile | IC50 | 0.2 nM | US-10214537 |
| 4-[4-amino-5-(trifluoromethyl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]-2-(2,2,5-trimethyl-3-oxomorpholin-4-yl)benzonitrile | IC50 | 0.2 nM | US-10214537 |
| 4-(4-amino-5-(1-(2,2,2-trifluoroethyl)- 1H-pyrazol-5-yl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-((5S,6S)-2,2,5,6- tetramethyl-3-oxomorpholino) benzonitrile | IC50 | 0.2 nM | US-10214537 |
| (R)-4-(4-amino-5-(trifluoromethyl) pyrrolo[2,1-f][1,2,4]triazin-7-yl)-2- (2,2,5-trimethyl-3-oxomorpholino) benzamide | IC50 | 0.2 nM | US-10214537 |
| N-(2-(4-(5-(4-amino-5-chloropyrrolo [2,1-f][1,2,4]triazin-7-yl)-2- fluorophenyl)-2,2-dimethyl-3- oxopiperazin-1-yl)-2-oxoethyl) acetamide | IC50 | 0.2 nM | US-10214537 |
| 1-(3-(4-amino-5-chloropyrrolo[2,1-f] [1,2,4]triazin-7-yl)phenyl)-4-(3- hydroxy-3-methylbutanoyl)-3,3- dimethylpiperazin-2-one | IC50 | 0.2 nM | US-10214537 |
| N-(2-(4-(5-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-cyanophenyl)-2,2- dimethyl-3-oxopiperazin-1-yl)-2- oxoethyl)methanesulfonamide | IC50 | 0.2 nM | US-10214537 |
| (S)-1-(5-(4-amino-5-chloropyrrolo [2,1-f][1,2,4]triazin-7-yl)-2- fluorophenyl)-3,3,6-trimethyl-4-(2- (methylsulfonyl)acetyl)piperazin-2-one | IC50 | 0.2 nM | US-10214537 |
| 4-acetyl-1-(5-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-(methoxymethyl) phenyl)-3,3-dimethylpiperazin-2-one | IC50 | 0.2 nM | US-10214537 |
| 2-methyl-2-[3-[1-methyl-4-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrazol-5-yl]piperidin-1-yl]propan-1-ol | IC50 | 0.262 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
| N,N-dimethyl-1-[1-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrrolidin-2-yl]methanamine | IC50 | 0.288 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
| 2-methyl-2-[3-[5-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrazol-1-yl]piperidin-1-yl]propan-1-ol | IC50 | 0.292 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
| 9-[1-methyl-5-(1-propan-2-ylpiperidin-3-yl)pyrazol-4-yl]-2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepine | IC50 | 0.293 nM | US-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use |
ChEMBL bioactivities
6100 potent at pChembl≥5 of 6100 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 11.00 | Ki | 0.01 | nM | CHEMBL4850297 |
| 11.00 | Ki | 0.01 | nM | CHEMBL4869783 |
| 10.90 | Ki | 0.01259 | nM | CHEMBL4167702 |
| 10.80 | Ki | 0.01585 | nM | CHEMBL4858875 |
| 10.70 | Ki | 0.02 | nM | OMIPALISIB |
| 10.62 | Ki | 0.024 | nM | OMIPALISIB |
| 10.60 | Ki | 0.02512 | nM | CHEMBL4873390 |
| 10.60 | Ki | 0.02512 | nM | CHEMBL4165185 |
| 10.60 | Ki | 0.02512 | nM | CHEMBL4175571 |
| 10.50 | Ki | 0.03162 | nM | CHEMBL4175737 |
| 10.40 | IC50 | 0.04 | nM | CHEMBL4441003 |
| 10.40 | Ki | 0.03981 | nM | CHEMBL4169192 |
| 10.37 | IC50 | 0.043 | nM | CHEMBL5947580 |
| 10.37 | IC50 | 0.043 | nM | CHEMBL5806327 |
| 10.32 | IC50 | 0.048 | nM | CHEMBL3704739 |
| 10.30 | Ki | 0.05012 | nM | CHEMBL4173087 |
| 10.30 | Ki | 0.05012 | nM | CHEMBL4174874 |
| 10.22 | Ki | 0.06 | nM | CHEMBL4864407 |
| 10.22 | IC50 | 0.06 | nM | OMIPALISIB |
| 10.20 | Ki | 0.0631 | nM | CHEMBL4170075 |
| 10.15 | Ki | 0.07 | nM | OMIPALISIB |
| 10.10 | Ki | 0.07943 | nM | CHEMBL4434674 |
| 10.10 | Ki | 0.07943 | nM | CHEMBL4855234 |
| 10.10 | Ki | 0.08 | nM | CHEMBL4860369 |
| 10.10 | IC50 | 0.08 | nM | CHEMBL4434674 |
| 10.10 | Ki | 0.079 | nM | TASELISIB |
| 10.07 | IC50 | 0.086 | nM | CHEMBL5927459 |
| 10.07 | IC50 | 0.086 | nM | CHEMBL5878158 |
| 10.05 | IC50 | 0.09 | nM | CHEMBL4868117 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL3403664 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL3805572 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL3805430 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL4541570 |
| 10.00 | Ki | 0.1 | nM | CHEMBL5555605 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL3805760 |
| 9.99 | IC50 | 0.102 | nM | CHEMBL3704656 |
| 9.97 | IC50 | 0.107 | nM | CHEMBL3704656 |
| 9.97 | IC50 | 0.106 | nM | CHEMBL3704656 |
| 9.92 | Ki | 0.12 | nM | TASELISIB |
| 9.91 | Ki | 0.122 | nM | CHEMBL2331664 |
| 9.90 | Ki | 0.1259 | nM | NEMIRALISIB |
| 9.90 | Ki | 0.1259 | nM | CHEMBL4867203 |
| 9.89 | IC50 | 0.13 | nM | CHEMBL3805760 |
| 9.89 | Ki | 0.13 | nM | CHEMBL4878958 |
| 9.85 | IC50 | 0.14 | nM | CHEMBL6058341 |
| 9.85 | IC50 | 0.14 | nM | CHEMBL5851512 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL3805664 |
| 9.80 | IC50 | 0.16 | nM | CHEMBL3704723 |
| 9.75 | IC50 | 0.178 | nM | CHEMBL3704706 |
| 9.74 | IC50 | 0.18 | nM | CHEMBL4166144 |
PubChem BioAssay actives
4318 with measured affinity, of 6100 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| N-[3-[4-[[(1S)-1-(5-methyl-4-oxo-3-phenylquinazolin-2-yl)ethyl]amino]-7H-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]methanesulfonamide | 1553507: Inhibition of PI3Kdelta (unknown origin) preincubated for 30 mins followed by insulin stimulation for 5 mins by Western blot analysis | ic50 | <0.0001 | uM |
| N-[2-[2-fluoro-4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| N-[2-[4-[(4-tert-butylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| N-[2-[4-[(4-tert-butylpiperazin-1-yl)methyl]-2-fluorophenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| 2-methoxy-5-morpholin-4-yl-N-[2-[4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]pyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| N-[2-[4-[[(2R,6S)-2,6-dimethylmorpholin-4-yl]methyl]-2-fluorophenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| 5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-3-pyridinyl]pyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| 5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[4-[[(3R,5S)-3,4,5-trimethylpiperazin-1-yl]methyl]phenyl]-3-pyridinyl]pyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| 5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[6-[(4-propan-2-ylpiperazin-1-yl)methyl]-3-pyridinyl]-3-pyridinyl]pyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| 5-(3,6-dihydro-2H-pyran-4-yl)-N-[5-[4-[[(2R,6S)-2,6-dimethylmorpholin-4-yl]methyl]phenyl]-3-pyridinyl]-2-methoxypyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | <0.0001 | uM |
| 2,4-difluoro-N-[2-methoxy-5-(4-pyridazin-4-ylquinolin-6-yl)-3-pyridinyl]benzenesulfonamide | 1994269: Inhibition of P13Kdelta (unknown origin) assessed as inhibition constant | ki | <0.0001 | uM |
| 2-amino-4-[[(1S)-1-(5-chloro-4-oxo-3-phenylquinazolin-2-yl)ethyl]amino]-6-methylpyrimidine-5-carbonitrile | 1299722: Inhibition human full length PI3Kdelta catalytic subunit/p85alpha assessed as formation of PIP3 after 30 mins by europium labeled GRP-based TR-FRET assay | ic50 | 0.0001 | uM |
| 3-phenyl-2-[1-(7H-purin-6-ylamino)ethyl]quinolizin-4-one | 1553490: Inhibition of PI3Kdelta (unknown origin) | ic50 | 0.0001 | uM |
| 2-(4-ethylpiperazin-1-yl)-N-[4-(2-morpholin-4-yl-4-oxochromen-8-yl)dibenzothiophen-1-yl]acetamide | 768757: Inhibition of PI-3K delta (unknown origin) | ic50 | 0.0001 | uM |
| 2-[(1S)-1-[(6-amino-5-ethynylpyrimidin-4-yl)amino]ethyl]-5-chloro-3-phenylquinazolin-4-one | 1299722: Inhibition human full length PI3Kdelta catalytic subunit/p85alpha assessed as formation of PIP3 after 30 mins by europium labeled GRP-based TR-FRET assay | ic50 | 0.0001 | uM |
| N-[2-[3-fluoro-4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | 0.0001 | uM |
| N-[2-[2-fluoro-4-[[4-(2-hydroxypropan-2-yl)piperidin-1-yl]methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | 0.0001 | uM |
| N-[2-[2,3-difluoro-4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | 0.0001 | uM |
| 2-(4-acetyl-3,3-dimethyl-2-oxopiperazin-1-yl)-4-[4-amino-5-(trifluoromethyl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]benzonitrile | 1448761: Inhibition of PI3Kdelta (unknown origin) after 60 mins using fluorescein-labeled kinase tracer by HTRF assay | ic50 | 0.0001 | uM |
| 2-methoxy-5-morpholin-4-yl-N-[5-[4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-3-pyridinyl]pyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | 0.0001 | uM |
| 2-[(S)-cyclopropyl-(7H-purin-6-ylamino)methyl]-5-methyl-3-phenylquinazolin-4-one | 1777368: Inhibition of recombinant human full length His-tagged p110delta/p85alpha expressed in baculovirus expression system measured after 60 mins in presence of ATP by ATP-competitive binding assay | ic50 | 0.0001 | uM |
| 5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[4-(piperazin-1-ylmethyl)phenyl]-3-pyridinyl]pyridine-3-sulfonamide | 1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assay | ki | 0.0001 | uM |
| 5-[(1S)-1-[4-amino-3-(3-fluoro-5-hydroxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-2-tert-butyl-4-chloropyridazin-3-one | 2065839: Inhibition of recombinant human PI3Kdelta using L-alpha-phosphatidylinositol sodium salt and L-alpha-phosphatidyl-L-serine as substrate incubated for 60 mins in presence of ATP by ADP-glo kinase assay | ki | 0.0001 | uM |
| 1-[1-[(2S)-2-hydroxypropanoyl]piperidin-4-yl]-3-methyl-8-(6-methyl-3-pyridinyl)imidazo[4,5-c][1,5]naphthyridin-2-one | 731922: Inhibition of human PI3Kdelta | ki | 0.0001 | uM |
| N-[5-[4-[5-[[(2S,6R)-2,6-dimethylmorpholin-4-yl]methyl]-1,3-oxazol-2-yl]-1H-indazol-6-yl]-2-methoxy-3-pyridinyl]methanesulfonamide | 1586658: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate preincubated for 15 mins followed by substrate addition measured after 60 mins by HTRF method | ki | 0.0001 | uM |
| 2-[6-(1H-indol-4-yl)-1H-indazol-4-yl]-5-[(4-propan-2-ylpiperazin-1-yl)methyl]-1,3-oxazole | 1586658: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate preincubated for 15 mins followed by substrate addition measured after 60 mins by HTRF method | ki | 0.0001 | uM |
| 4-amino-6-[[(1S)-1-(6-fluoro-4-methylsulfonyl-3-phenylquinolin-2-yl)ethyl]amino]pyrimidine-5-carbonitrile | 1192865: Inhibition of PI3Kdelta (unknown origin) assessed as inhibition of AKT phosphorylation by cell-based HTRF assay | ic50 | 0.0001 | uM |
| 2-methyl-2-[4-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrazol-1-yl]propanamide | 750479: Inhibition of PI3Kdelta (unknown origin) | ki | 0.0001 | uM |
| 2,4-diamino-6-[[(1S)-1-[5-chloro-4-oxo-3-(1H-pyrazol-5-yl)quinazolin-2-yl]ethyl]amino]pyrimidine-5-carbonitrile | 1438035: Inhibition of human full length PI3K p110delta/p85 alpha using PIP2/ATP as substrate after 30 mins by TR-FRET assay | ic50 | 0.0002 | uM |
| 2-[(1S)-1-[[6-amino-5-(2H-tetrazol-5-yl)pyrimidin-4-yl]amino]ethyl]-3-phenylpyrrolo[2,1-f][1,2,4]triazin-4-one | 1553507: Inhibition of PI3Kdelta (unknown origin) preincubated for 30 mins followed by insulin stimulation for 5 mins by Western blot analysis | ic50 | 0.0002 | uM |
| N-[5-[2-amino-4-methyl-8-[(3R)-oxolan-3-yl]oxyquinazolin-6-yl]-2-methoxy-3-pyridinyl]-2,4-difluorobenzenesulfonamide | 1355493: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate by ADP-Glo assay | ic50 | 0.0002 | uM |
| N-[5-[2-amino-4-methyl-8-(oxan-4-yloxy)quinazolin-6-yl]-2-methoxy-3-pyridinyl]-2,4-difluorobenzenesulfonamide | 1355493: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate by ADP-Glo assay | ic50 | 0.0002 | uM |
| 2-amino-N-[7-methoxy-8-(3-morpholin-4-ylpropoxy)-2,3-dihydro-1H-imidazo[1,2-c]quinazolin-5-ylidene]pyrimidine-5-carboxamide | 1560711: Inhibition of human full-length His-tagged p110delta/p85alpha expressed in baculovirus expression system using PIP2 as substrate measured after 1 hr by ADP-glo assay | ic50 | 0.0002 | uM |
| 4-[4-amino-5-(trifluoromethyl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]-2-[(5S,6R)-2,2,5,6-tetramethyl-3-oxomorpholin-4-yl]benzonitrile | 1469862: Inhibition of PI3Kdelta (unknown origin) after 60 mins using fluorescein-labeled kinase tracer by HTRF assay | ic50 | 0.0002 | uM |
| 4-[2-[2-[(1S)-1-[(2,6-diamino-5-cyanopyrimidin-4-yl)amino]propyl]-4-oxo-3-phenylquinazolin-5-yl]ethyl]-N-hydroxybenzamide | 1605952: Inhibition of human PI3Kdelta assessed as reduction in PIP3 product complex formation by measuring displacement of biotin-labelled PIP3 from complex using PIP2 as substrate measured after 30 mins in presence of ATP by HTRF assay | ic50 | 0.0002 | uM |
| 6-[2-[(1S)-1-[(2-amino-5-cyano-6-methylpyrimidin-4-yl)amino]propyl]-4-oxo-3-phenylquinazolin-5-yl]-N-hydroxyhexanamide | 1605952: Inhibition of human PI3Kdelta assessed as reduction in PIP3 product complex formation by measuring displacement of biotin-labelled PIP3 from complex using PIP2 as substrate measured after 30 mins in presence of ATP by HTRF assay | ic50 | 0.0002 | uM |
| N-hydroxy-6-[4-oxo-3-phenyl-2-[(1S)-1-(7H-purin-6-ylamino)propyl]quinazolin-5-yl]hexanamide | 1605952: Inhibition of human PI3Kdelta assessed as reduction in PIP3 product complex formation by measuring displacement of biotin-labelled PIP3 from complex using PIP2 as substrate measured after 30 mins in presence of ATP by HTRF assay | ic50 | 0.0002 | uM |
| 2-methoxy-N-[2-methoxy-5-[7-[[(2R)-4-(oxetan-3-yl)morpholin-2-yl]methoxy]-1,3-dihydro-2-benzofuran-5-yl]-3-pyridinyl]ethanesulfonamide | 1528687: Binding affinity to PI3Kdelta in human HL60 cell extract measured after 2 hrs by kinobeads based pull down assay | kd | 0.0002 | uM |
| 4-amino-6-[[(1S)-1-(3-chloro-6-phenylimidazo[1,2-a]pyridin-7-yl)ethyl]amino]pyrimidine-5-carbonitrile | 1553490: Inhibition of PI3Kdelta (unknown origin) | ic50 | 0.0002 | uM |
| N-[2-chloro-5-(4-imidazol-1-ylcinnolin-6-yl)-3-pyridinyl]benzenesulfonamide | 1765908: Inhibition of PI3Kdelta (unknown origin) | ic50 | 0.0002 | uM |
| 5-[(1S)-1-[4-amino-3-(3-fluoro-5-hydroxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-2-tert-butyl-4-methoxypyridazin-3-one | 2065839: Inhibition of recombinant human PI3Kdelta using L-alpha-phosphatidylinositol sodium salt and L-alpha-phosphatidyl-L-serine as substrate incubated for 60 mins in presence of ATP by ADP-glo kinase assay | ki | 0.0002 | uM |
| 3-[(1S)-1-[4-amino-3-(5-hydroxy-3-pyridinyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-4-[1-[(3,5-dimethyl-1,2-oxazol-4-yl)sulfonyl]-3,6-dihydro-2H-pyridin-5-yl]isochromen-1-one | 2249906: Inhibition of recombinant human PI3Kdelta using L-alpha-phosphatidylinositol sodium salt and L-alpha-phosphatidyl-L-serine as substrate incubated for 60 mins in presence of ATP by ADP-glo kinase assay | ki | 0.0002 | uM |
| 4-[3-[[2-(2-ethylbenzimidazol-1-yl)-9-methyl-6-morpholin-4-ylpurin-8-yl]methyl]azetidin-1-yl]thiane 1,1-dioxide | 764682: Inhibition of PI3Kdelta (unknown origin) assessed as formation of PIP3 by competitive fluorescence polarization assay | ki | 0.0002 | uM |
| 4-amino-6-[[(1S)-1-[6-fluoro-3-phenyl-4-(piperazine-1-carbonyl)quinolin-2-yl]ethyl]amino]pyrimidine-5-carbonitrile | 1628650: Inhibition of polyHis tagged full length recombinant PI3Kdelta (unknown origin) expressed in Sf9 cells co-expressing p85 incubated for 20 mins by alpha screen assay | ic50 | 0.0002 | uM |
| 4-amino-6-[[(1S)-1-[6-fluoro-4-(2-methylsulfonylethylamino)-3-phenylquinolin-2-yl]ethyl]amino]pyrimidine-5-carbonitrile | 1192861: Inhibition of PI3Kdelta (unknown origin) by biochemical Alphascreen assay | ic50 | 0.0002 | uM |
| Duvelisib | 1994225: Inhibition of P13Kdelta (unknown origin) | ic50 | 0.0002 | uM |
| 4-amino-6-[[(1S)-1-(6-fluoro-1-phenylbenzimidazol-2-yl)ethyl]amino]pyrimidine-5-carbonitrile | 719910: Inhibition of PI3Kdelta | ki | 0.0002 | uM |
| 1-[(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]-2-methylpropan-1-one | 1707453: Inhibition of recombinant human PI3K p110delta/p85alpha using phosphatidylinositol 4,5-bisphosphate as substrate preincubated for 15 mins followed by addition of ATP and measured after 30 mins by fluorescence polarisation assay | ki | 0.0003 | uM |
| 5-[7-[(3S)-3-methyl-1-methylsulfonylpyrrolidin-3-yl]-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-4-yl]pyrimidin-2-amine | 1707453: Inhibition of recombinant human PI3K p110delta/p85alpha using phosphatidylinositol 4,5-bisphosphate as substrate preincubated for 15 mins followed by addition of ATP and measured after 30 mins by fluorescence polarisation assay | ki | 0.0003 | uM |
| (3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-N,3-dimethylpyrrolidine-1-sulfonamide | 1707453: Inhibition of recombinant human PI3K p110delta/p85alpha using phosphatidylinositol 4,5-bisphosphate as substrate preincubated for 15 mins followed by addition of ATP and measured after 30 mins by fluorescence polarisation assay | ki | 0.0003 | uM |
CTD chemical–gene interactions
70 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | increases expression, increases methylation, affects methylation, decreases expression | 5 |
| sodium arsenite | affects methylation, increases abundance, increases expression | 3 |
| Cannabidiol | affects cotreatment, decreases expression | 3 |
| Tretinoin | increases expression | 3 |
| Valproic Acid | affects expression, increases expression, increases methylation | 3 |
| moringin | affects cotreatment, decreases expression | 2 |
| trichostatin A | affects expression, increases expression | 2 |
| Arsenic | increases expression, increases abundance | 2 |
| Ozone | increases abundance, increases expression, affects cotreatment, decreases expression | 2 |
| GSK-J4 | increases expression | 1 |
| dicrotophos | increases expression | 1 |
| tylophorine | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| bis(tri-n-butyltin)oxide | decreases expression | 1 |
| bisphenol A | decreases methylation | 1 |
| 2,2’-methylenebis(4-methyl-6-tert-butylphenol) | affects expression, affects response to substance | 1 |
| terbufos | increases methylation | 1 |
| sulforaphane | decreases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| ochratoxin A | decreases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects cotreatment, decreases expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| celastrol | decreases expression | 1 |
| tamibarotene | increases expression | 1 |
| yessotoxin | increases expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| gedunin | decreases expression | 1 |
ChEMBL screening assays
1111 unique, capped per target: 1094 binding, 8 admet, 8 functional, 1 toxicity
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1261702 | Binding | Inhibition of P110delta/p85-alpha | Discovery of 1-(4-(4-propionylpiperazin-1-yl)-3-(trifluoromethyl)phenyl)-9-(quinolin-3-yl)benzo[h][1,6]naphthyridin-2(1H)-one as a highly potent, selective mammalian target of rapamycin (mTOR) inhibitor for the treatment of cancer. — *J Med Chem* |
| CHEMBL4403972 | ADMET | Inhibition of AlexaFluor-labeled tracer 236 binding to full-length human His-tagged p110delta/p85alpha expressed in baculovirus expression system measured after 60 mins by LanthaScreen assay | The Discovery of 7-Methyl-2-[(7-methyl[1,2,4]triazolo[1,5-a]pyridin-6-yl)amino]-9-(tetrahydro-2H-pyran-4-yl)-7,9-dihydro-8H-purin-8-one (AZD7648), a Potent and Selective DNA-Dependent Protein Kinase (DNA-PK) Inhibitor. — *J Med Chem* |
| CHEMBL5123070 | Toxicity | Inhibition of human PI3Kdelta by ADP-Glo assay | Discovery of novel 7,8-dihydropteridine-6(5H)-one-based DNA-PK inhibitors as potential anticancer agents via scaffold hopping strategy. — *Eur J Med Chem* |
Cellosaurus cell lines
16 cell lines: 14 cancer cell line, 2 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_0093 | RS4;11 | Cancer cell line | Female |
| CVCL_B7YR | Abcam Raji PIK3CD KO | Cancer cell line | Male |
| CVCL_B9ZG | Abcam THP-1 PIK3CD KO | Cancer cell line | Male |
| CVCL_C0C4 | CHCMUi001-A | Induced pluripotent stem cell | Female |
| CVCL_C7B5 | Abcam PC-3 PIK3CD KO | Cancer cell line | Male |
| CVCL_D4ZR | SDQLCHi068-A | Induced pluripotent stem cell | Male |
| CVCL_D7XA | Ubigene A-549 PIK3CD KO | Cancer cell line | Male |
| CVCL_D8SR | Ubigene HCT 116 PIK3CD KO | Cancer cell line | Male |
| CVCL_E0KL | Ubigene HeLa PIK3CD KO | Cancer cell line | Female |
| CVCL_E8JJ | RS4;11 mouse MCL1 | Cancer cell line | Female |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
5 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT05438407 | Phase 3 | ACTIVE_NOT_RECRUITING | Pediatric Patients Aged 4 to 11 Years With APDS |
| NCT05693129 | Phase 3 | ACTIVE_NOT_RECRUITING | Pediatric Patients Aged 1 to 6 Years With APDS |
| NCT02593539 | Phase 2 | COMPLETED | Safety, Pharmacokinetic (PK) and Pharmacodynamic (PD) Study of Repeat Doses of Inhaled Nemiralisib in Patients With APDS/PASLI |
| NCT03383380 | Phase 1/2 | COMPLETED | Rapamycin Treatment for Activated Phosphoinositide 3-Kinase δ Syndrome |
| NCT06694363 | Not specified | RECRUITING | New Biomarker-based Strategy to Screen and Monitor for Activated Phosphoinositide 3-kinase δ Syndrome |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for PIK3CD across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Associated diseases: immunodeficiency 14, immunodeficiency 14b, autosomal recessive
- Targeted by drugs: Alpelisib, Copanlisib, Dactolisib, Duvelisib, Idelalisib, Inavolisib, Leniolisib, Parsaclisib, Taselisib, Umbralisib, Zandelisib
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): activated PI3K-delta syndrome, combined immunodeficiency with faciooculoskeletal anomalies, immunodeficiency 14, immunodeficiency 14b, autosomal recessive, irritable bowel syndrome, testicular germ cell tumor