Send feedback

PIK3CD

gene
On this page

Also known as p110D

Summary

PIK3CD (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, HGNC:8977) is a protein-coding gene on chromosome 1p36.22, encoding Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (O00329). Phosphoinositide-3-kinase (PI3K) phosphorylates phosphatidylinositol (PI) and its phosphorylated derivatives at position 3 of the inositol ring to produce 3-phosphoinositides.

Phosphoinositide 3-kinases (PI3Ks) phosphorylate inositol lipids and are involved in the immune response. The protein encoded by this gene is a class I PI3K found primarily in leukocytes. Like other class I PI3Ks (p110-alpha p110-beta, and p110-gamma), the encoded protein binds p85 adapter proteins and GTP-bound RAS. However, unlike the other class I PI3Ks, this protein phosphorylates itself, not p85 protein.

Source: NCBI Gene 5293 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): immunodeficiency 14b, autosomal recessive (Definitive, ClinGen) — +1 more curated relationship
  • GWAS associations: 9
  • Clinical variants (ClinVar): 968 total — 19 pathogenic, 14 likely-pathogenic (top 3% of genes corpus-wide)
  • Regional missense constraint (gnomAD): 2 of 6 regions constrained (≈8% of expected missense variation)
  • GTEx eGene: eQTL in 26 tissues, sQTL in 7 (q < 0.05)
  • Phenotypes (HPO): 142
  • Drug target: yes — 18 curated mechanism-of-action drugs, 26 via a complex or family; 66 molecules with ChEMBL bioactivity (top 1% of genes corpus-wide)
  • Approved drugs (ChEMBL mechanism of action): 5 — Copanlisib, Duvelisib Monohydrate, Idelalisib, +2 more
  • Constraint (gnomAD): pLI 1.00 (loss-of-function intolerant), LOEUF 0.23 (highly constrained)
  • MANE Select transcript: NM_005026
  • Interaction hub: 9,893 STRING partners (top 1% of genes corpus-wide)

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:8977
Approved symbolPIK3CD
Namephosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
Location1p36.22
Locus typegene with protein product
StatusApproved
Aliasesp110D
Ensembl geneENSG00000171608
Ensembl biotypeprotein_coding
OMIM602839
Entrez5293

Gene structure

Transcript identifiers

Ensembl transcripts: 38 — 25 protein_coding, 9 retained_intron, 2 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined

MANE Select: ENST00000377346

Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2, TSL 2: 1, TSL 3: 1, TSL 5: 1

ENST00000377346, ENST00000361110, ENST00000479223, ENST00000481137, ENST00000484851, ENST00000698706, ENST00000698707, ENST00000698708, ENST00000698709, ENST00000698710, ENST00000698711, ENST00000698712, ENST00000698713, ENST00000698714, ENST00000698715, ENST00000698716, ENST00000698717, ENST00000698718, ENST00000698719, ENST00000698786, ENST00000698787, ENST00000698788, ENST00000698789, ENST00000892287, ENST00000892288, ENST00000892289, ENST00000892290, ENST00000932635, ENST00000932636, ENST00000932637, ENST00000932638, ENST00000932639, ENST00000960479, ENST00000960480, ENST00000960481, ENST00000960482, ENST00001052785, ENST00001145842

RefSeq mRNA: 7 — MANE Select: NM_005026 NM_001350234, NM_001350235, NM_001437546, NM_001437547, NM_001438338, NM_001439206, NM_005026

CCDS: CCDS104, CCDS90856

Canonical transcript exons

ENST00000377346 — 24 exons

ExonStartEnd
ENSE0000114950597201129720242
ENSE0000114951997248049724936
ENSE0000114953297242769724421
ENSE0000114955197231259723292
ENSE0000114956397225289722606
ENSE0000114957497222449722356
ENSE0000114961697199219720017
ENSE0000114962697186949718915
ENSE0000114963397175379717626
ENSE0000114965497164409716619
ENSE0000114966197158499716078
ENSE0000118074197219759722153
ENSE0000118074897217619721860
ENSE0000118075397214449721587
ENSE0000118075997211279721248
ENSE0000128405897207429720909
ENSE0000129804797206119720661
ENSE0000164342697239699724092
ENSE0000187910597155419715769
ENSE0000222514897269099729114
ENSE0000355092697169599717108
ENSE0000397449396914679691571
ENSE0000397449696517319651802
ENSE0000397450197104249710596

Expression profiles

Bgee: expression breadth ubiquitous, 253 present calls, max score 97.96.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 22.6697 / max 892.4409, expressed in 1672 samples.

Highest expression (Bgee): granulocyte, blood, lymph node, leukocyte, mononuclear cell.

Genetic regulation across tissues (GTEx eQTL / sQTL)

PIK3CD is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 26 tissues and its splicing (sQTL) in 7 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.

showing 20 of 33 significant tissue × QTL associations:

TissueQTLq-valueSlopeLead variant
Artery Tibialeqtl1.8e-27+0.231:9689877:T:G
Spleensqtl1.4e-16-1.711:9723347:G:A
Cells Cultured fibroblastseqtl2.0e-13+0.171:9689877:T:G
Nerve Tibialeqtl2.9e-12+0.171:9690399:T:C
Brain Cortexeqtl1.9e-11+0.361:9690399:T:C
Artery Aortaeqtl8.6e-11+0.221:9681654:C:G
Whole Bloodsqtl1.6e-10-1.091:9723347:G:A
Brain Cerebellumeqtl3.7e-10+0.381:9690399:T:C
Brain Frontal Cortex BA9eqtl3.8e-10+0.391:9689877:T:G
Skin Sun Exposed Lower legeqtl5.7e-08+0.161:9690399:T:C
Esophagus Gastroesophageal Junctioneqtl1.4e-07+0.191:9689877:T:G
Colon Sigmoideqtl2.5e-07+0.221:9689877:T:G
Esophagus Musculariseqtl4.6e-07+0.151:9689877:T:G
Skin Not Sun Exposed Suprapubiceqtl1.2e-06+0.161:9689877:T:G
Stomacheqtl3.3e-06+0.151:9689877:T:G
Pancreaseqtl2.9e-05+0.191:9690399:T:C
Colon Transverseeqtl2.0e-04+0.111:9690399:T:C
Breast Mammary Tissueeqtl4.3e-04+0.121:9688387:T:G
Brain Cerebellar Hemisphereeqtl4.6e-04+0.231:9683176:T:C
Lungsqtl9.3e-04-0.891:9750305:C:T

FANTOM5 promoters

7 alternative TSS:

Promoter IDTPM avgSamples expressed
52916.8188819
5333.77181325
5301.0614270
5320.4771234
5340.2434111
5360.215466
2013470.081835

Top tissues by expression

showing 100 of 287 tissues by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
granulocyteCL:000009497.96gold quality
bloodUBERON:000017897.31gold quality
lymph nodeUBERON:000002994.11gold quality
leukocyteCL:000073893.94gold quality
mononuclear cellCL:000084293.63gold quality
trabecular bone tissueUBERON:000248393.63gold quality
spleenUBERON:000210693.56gold quality
monocyteCL:000057693.52gold quality
vermiform appendixUBERON:000115493.49gold quality
bone marrow cellCL:000209292.76gold quality
bone marrowUBERON:000237190.87gold quality
periodontal ligamentUBERON:000826690.70gold quality
caecumUBERON:000115390.67gold quality
paraflocculusUBERON:000535187.99silver quality
thymusUBERON:000237087.84gold quality
frontal poleUBERON:000279587.84silver quality
epithelium of nasopharynxUBERON:000195187.20gold quality
parietal pleuraUBERON:000240087.04gold quality
ileal mucosaUBERON:000033186.61gold quality
amniotic fluidUBERON:000017386.20gold quality
tibiaUBERON:000097986.19gold quality
middle frontal gyrusUBERON:000270286.03gold quality
gluteal muscleUBERON:000200085.91gold quality
triceps brachiiUBERON:000150985.69gold quality
pleuraUBERON:000097785.30gold quality
tonsilUBERON:000237285.19gold quality
Brodmann (1909) area 10UBERON:001354184.99silver quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099183.74gold quality
cartilage tissueUBERON:000241882.93gold quality
deciduaUBERON:000245082.53gold quality
dorsal motor nucleus of vagus nerveUBERON:000287082.07gold quality
parotid glandUBERON:000183182.02silver quality
endometrium epitheliumUBERON:000481182.02gold quality
upper lobe of left lungUBERON:000895281.88gold quality
visceral pleuraUBERON:000240181.47gold quality
gall bladderUBERON:000211081.43gold quality
nasal cavity epitheliumUBERON:000538481.18silver quality
upper lobe of lungUBERON:000894881.00gold quality
stromal cell of endometriumCL:000225580.98gold quality
small intestine Peyer’s patchUBERON:000345480.89gold quality
palpebral conjunctivaUBERON:000181280.34gold quality
cortical plateUBERON:000534380.30gold quality
tendon of biceps brachiiUBERON:000818880.03gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047380.00gold quality
diaphragmUBERON:000110379.85gold quality
small intestineUBERON:000210879.57gold quality
right coronary arteryUBERON:000162579.50gold quality
right lungUBERON:000216779.30gold quality
tongue squamous epitheliumUBERON:000691979.12gold quality
lungUBERON:000204878.99gold quality
mucosa of stomachUBERON:000119978.77gold quality
layer of synovial tissueUBERON:000761678.54silver quality
apex of heartUBERON:000209878.50gold quality
left ovaryUBERON:000211978.38gold quality
adipose tissue of abdominal regionUBERON:000780878.29gold quality
superficial temporal arteryUBERON:000161478.28gold quality
omental fat padUBERON:001041478.25gold quality
peritoneumUBERON:000235878.24gold quality
lateral nuclear group of thalamusUBERON:000273677.94silver quality
cingulate cortexUBERON:000302777.72gold quality
anterior cingulate cortexUBERON:000983577.65gold quality
endothelial cellCL:000011577.56silver quality
ovaryUBERON:000099277.51gold quality
prefrontal cortexUBERON:000045177.35gold quality
right ovaryUBERON:000211877.25gold quality
tracheaUBERON:000312676.76silver quality
thoracic aortaUBERON:000151576.68gold quality
ascending aortaUBERON:000149676.65gold quality
left uterine tubeUBERON:000130376.60gold quality
metanephros cortexUBERON:001053376.57gold quality
neocortexUBERON:000195076.52gold quality
frontal cortexUBERON:000187076.51gold quality
right frontal lobeUBERON:000281076.43gold quality
lower esophagusUBERON:001347376.37gold quality
endocervixUBERON:000045876.36gold quality
lower esophagus muscularis layerUBERON:003583376.36gold quality
descending thoracic aortaUBERON:000234576.35gold quality
aortaUBERON:000094776.31gold quality
myometriumUBERON:000129676.28gold quality
fundus of stomachUBERON:000116076.23gold quality
bronchusUBERON:000218576.23gold quality
body of uterusUBERON:000985376.17gold quality
epithelium of bronchusUBERON:000203176.08gold quality
popliteal arteryUBERON:000225076.08gold quality
tibial arteryUBERON:000761076.08gold quality
superior surface of tongueUBERON:000737176.03gold quality
inferior olivary complexUBERON:000212775.92silver quality
connective tissueUBERON:000238475.92gold quality
esophagogastric junction muscularis propriaUBERON:003584175.87gold quality
nasal cavity mucosaUBERON:000182675.76gold quality
adipose tissueUBERON:000101375.67gold quality
pylorusUBERON:000116675.67gold quality
oocyteCL:000002375.63silver quality
urinary bladderUBERON:000125575.61gold quality
anatomical systemUBERON:000046775.60gold quality
material anatomical entityUBERON:000046575.56gold quality
multicellular organismUBERON:000046875.56gold quality
smooth muscle tissueUBERON:000113575.55gold quality
cerebral cortexUBERON:000095675.53gold quality
vaginaUBERON:000099675.52gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-MTAB-9067yes11.13
E-ANND-3yes5.75

HPA expression

RNA tissue specificity: Tissue enhanced

showing 60 of 79 HPA tissues / cells by nTPM:

Tissue / cellAxisnTPMProtein (IHC)
Bone marrowtissue44.2not detected
Lymph nodetissue42.3medium
Spleentissue31.8low
Appendixtissue29.3medium
Tonsiltissue27.8medium
Thymustissue23.7
Superior colliculitissue10.5
Thalamustissue10.3
Hippocampustissue9.0not detected
Midbraintissue8.8
Ponstissue8.3
Frontal cortextissue8.0
Choroid plexustissue7.9
Lungtissue7.2not detected
Locus coeruleustissue7.0
Spinal cordtissue6.8
Urinary bladdertissue6.4not detected
Medulla oblongatatissue6.0
Gallbladdertissue6.0low
Substantia nigratissue5.8
Small intestinetissue5.8not detected
Postcentral gyrustissue5.8
Caudate putamentissue5.6
Stomach 1tissue5.2not detected
Hypothalamustissue4.8
Duodenumtissue4.6not detected
Ovarytissue4.4not detected
Vaginatissue4.4not detected
Cerebral cortextissue4.3not detected
Periaqueductal graytissue4.3
Somatosensory cortextissue4.3
Salivary glandtissue4.2not detected
Hippocampal formationtissue4.2
Entorhinal cortextissue4.2
Insular cortextissue4.2
Adipose tissuetissue4.1not detected
Nucleus accumbenstissue4.1
Esophagustissue3.9not detected
Smooth muscletissue3.9not detected
Motor cortextissue3.8
Septumtissue3.8
Temporal cortextissue3.8
Prefrontal cortextissue3.7
Amygdalatissue3.7
Placentatissue3.6not detected
Corpus callosumtissue3.6
Retrosplenial and cingulate cortextissue3.5
Retrosplenial cortextissue3.5
Testistissue3.4medium
Occipital cortextissue3.4
Ventral forebraintissue3.2
Colontissue3.1not detected
Fallopian tubetissue3.1not detected
Endometrium 1tissue2.8not detected
Tonguetissue2.8
Heart muscletissue2.6not detected
Parathyroid glandtissue2.6not detected
Putamentissue2.6
Rectumtissue2.5not detected
Pancreastissue2.5not detected

Brain sub-regions (HPA Brain Atlas): detected in 189; highest nTPM — Anterior thalamic nucleus, ventral (14.1), Centromedial thalamic nucleus (14.0), Lateral funiculus (white matter) (11.8), Ventral posterolateral thalamic nucleus (11.0), Nuclei of the trapezoid body (10.8).

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): RUNX1

miRNA regulators (miRDB)

Targeting PIK3CD by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).

showing 30 of 73 miRNAs:

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-30A-5P100.0076.313233
HSA-MIR-30B-5P100.0076.293248
HSA-MIR-30C-5P100.0076.293248
HSA-MIR-30D-5P100.0076.323233
HSA-MIR-30E-5P100.0076.323242
HSA-MIR-5692A100.0074.406850
HSA-MIR-3613-3P100.0076.367965
HSA-MIR-4510100.0066.602050
HSA-MIR-6127100.0066.762188
HSA-MIR-6129100.0066.462080
HSA-MIR-6130100.0066.692012
HSA-MIR-6133100.0066.482064
HSA-MIR-371B-5P99.9975.344759
HSA-MIR-607799.9968.042299
HSA-MIR-520G-5P99.9966.76658
HSA-MIR-373-5P99.9875.364753
HSA-MIR-616-5P99.9875.584775
HSA-MIR-480399.9871.993117
HSA-MIR-3682-5P99.9367.971163
HSA-MIR-313399.8170.923506
HSA-MIR-320A-3P99.7769.732107
HSA-MIR-320B99.7769.732107
HSA-MIR-320C99.7769.732107
HSA-MIR-320D99.7769.732107
HSA-MIR-442999.7769.622111
HSA-MIR-10393-3P99.7266.56961
HSA-MIR-6801-5P99.7266.50981
HSA-MIR-7-5P99.6770.531809
HSA-MIR-3158-5P99.6567.511763
HSA-MIR-5197-5P99.6469.081494

Functional genomics

gnomAD constraint: pLI 1, LOEUF 0.23, missense Z 6.4 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD

Regional missense constraint (gnomAD)

ENST00000377346 splits into 6 regions with different missense tolerance; 2 are missense-constrained (≈8% of the expected missense variation). Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD

Region (GRCh38)Missense obs / expo/eConstrained
1:9,710,456–9,721,822592 / 920.60.64no
1:9,721,823–9,721,9821 / 20.50.05yes (p 1.7e-05)
1:9,721,983–9,722,25348 / 71.90.67no
1:9,722,254–9,723,98469 / 166.80.41no
1:9,723,985–9,724,38417 / 97.00.18yes (p 4.5e-16)
1:9,724,385–9,727,04360 / 129.50.46no

Literature-anchored findings (GeneRIF, showing 40)

  • PI3K delta can play a selective role in the amplification of phosphatidylinositol (3,4,5) trisphosphate (PIP3) levels that lead to neutrophil polarization and regulate directional migration, but not random locomotion. (PMID:12594293)
  • p110delta isoform of PI3K is consistently expressed at a high level in blast cells from AML, in contrast to the other class I isoforms (PMID:15840695)
  • Stimulation of TNF-alpha-primed human neutrophils with fMLP results in biphasic activation of PI3K; the first phase is largely dependent on PI3Kgamma; the second phase is largely dependent on PI3Kdelta and regulates parallel activation of ROS production (PMID:15878979)
  • p110beta, -gamma, and -delta isoforms of class I phosphoinositide 3-kinase have roles in oncogenic transformation (PMID:16432180)
  • These findings could shed light on further understanding the polymorphisms of p110delta in B-cell immunodeficiency and different populations. (PMID:16984281)
  • p110delta contributes significantly to Th cell expansion and differentiation in vitro and in vivo, also in the context of CD28 costimulation. (PMID:17015696)
  • This review describes the second-messenger PI3K delta signalling pathways that are involved in immune responses relevant to the pathogenesis of rheumatoid arthritis and other inflammatory diseases. (PMID:17290298)
  • identifies the RhoA/ROCK pathway as a major target of p110delta-mediated PI3K signalling (PMID:17581634)
  • novel function of the class I(A) PI3K isoform p110delta in neuroblastoma growth and survival. (PMID:18281552)
  • These results demonstrate that CD148 may interact with and dephosphorylate p85 when it is phosphorylated and modulate the magnitude of phosphoinositide 3-kinase activity. (PMID:18348712)
  • In contrast with PI3Kalpha, beta and gamma, PI3Kdelta accounts for most of the PI3K-dependent signaling ruling the production of IL-1beta, IL-6, TNF and sIL-1Ra in monocytes. (PMID:18471882)
  • Results identify a conserved phosphoinositide 3-kinase p11delta promoter region that may account for the predominant leukocyte expression of p110delta. (PMID:19357769)
  • RUNX1 may play a critical role in chemotherapy response in acute megakaryocytic leukemia by regulating the PI3-kinase/Akt pathway. (PMID:19638627)
  • These studies establish that previously activated memory T cells are at least as sensitive to p110delta inhibition as naive T cells and show that mouse models accurately predict p110delta function in human T cells. (PMID:20081091)
  • Data show that similar responses were seen in cancer cells with wild-type or activated mutant PI3K genes treated with p110alpha/delta or p110alpha/beta/delta inhibitors in cell viability assays. (PMID:20103642)
  • PI3Kdelta expression and signaling is increased in the lungs of patients with COPD. (PMID:20381852)
  • IFN-beta triggers an atypical MEK2/PI3Kdelta signaling cascade to regulate sIL-1Ra expression in monocytes. (PMID:20837746)
  • These observations suggest that PI3Kdelta contributes to induction of enhanced systemic lupus erythematosus memory T cell survival (PMID:21810603)
  • PI3K p110delta is important for TGFB1 induced production of the contractile proteins calponin and alpha-SMA and the proinflammatory cytokine IL-6 (PMID:22015454)
  • p37delta appears to be a new tumor-specific isoform of p110delta with growth-promoting properties (PMID:22020336)
  • Isoform specific targeting of PI3Kdelta may be beneficial in the treatment of glioblastoma multiforme by specifically inhibiting tumour cell migration capacity. (PMID:22079609)
  • p110delta-dependent translocation of exogenous CSF-1 to the nucleus-associated CSF-1Rs, correlating with a prominent role of p110delta in activation of the Rab5 GTPase, a key regulator of endocytic trafficking (PMID:22084313)
  • Findings suggest that excessive PI3Kdelta activity is characteristic in Hodgkin lymphoma (HL) and support clinical evaluation of GS-1101, alone and in combination, as targeted therapy for HL. (PMID:22210877)
  • present a detailed biochemical and bioinformatic characterization of p110delta gene regulation, demonstrating that PIK3CD has distinct promoters, some of which can be dynamically activated by pro-inflammatory mediators (PMID:22375552)
  • PI3 kinase delta is a key regulator of synoviocyte function in rheumatoid arthritis. (PMID:22433439)
  • PIK3CD shows evidence of association with schizophrenia, and is a previously undescribed therapeutic target for the treatment of psychiatric disorders. (PMID:22689948)
  • Studies indicate that the research with phosphoinositide 3-kinase p110-delta (p110delta) in chronic lymphocytic leukemia (CLL) have led to a more fundamental understanding of CLL signaling defects. (PMID:22711705)
  • High PIK3CA/PIK3CD ratio identified a subset of primary mantle cell lymphomas resistant to GS-1101 and this ratio increased significantly with relapse. (PMID:23341541)
  • The expression of PIK3CD is inversely correlated with miR-30a levels in metastatic colorectal carcinoma tissues. (PMID:23486085)
  • These results suggest that PI3Kdelta mediates dsRNA-induced upregulation of B7-H1 without affecting the activation of NF-kappaB. (PMID:23660190)
  • this study found E1021K in 17 patients with activated PI3K-delta syndrome (APDS), from seven unrelated families with, but not among 3346 healthy subjects. (PMID:24136356)
  • Data indicate that patients with combined immunodeficiency disease who share gain-of-function mutations in PIK3CD (p110delta), resulting in hyperactivation of mTOR signaling and skewed the differentiation of CD8+ T cells. (PMID:24165795)
  • Study reveals functional and mechanistic links between miRNA-30b and oncogene KRAS, PIK3CD and BCL2 in the pathogenesis of colorectal carcinoma. (PMID:24293274)
  • PI3Kdelta contributes to multiple aspects of the pathogenic FLS behavior in RA. These observations, together with previous findings that PI3Kdelta regulates FLS growth and survival (PMID:24470496)
  • PIK3CD is a target gene of miR-125b in Ewing’s sarcoma cells. RT-PCR and western blot assays identify over-expression of miR-125b that suppresses the expression of PIK3CD mRNA and protein. (PMID:24517182)
  • PIK3CD was inversely correlated with miR-663 in glioblastoma specimens and predicted poor prognosis of patients with glioblastoma (PMID:24523440)
  • Gestational diabetes mellitus is accompanied by leukocyte PIK3CD overexpression associated with reduced plasma LDL-C and TC levels, as well as with hyperglycaemia and elevated leukocyte SIRT1 mRNA. (PMID:24549598)
  • PI3K p110delta uniquely promotes gain-of-function Shp2-induced GM-CSF hypersensitivity in a model of juvenile myelomonocytic leukemia. (PMID:24553178)
  • Mutations in PIK3CD can cause hyper IgM syndrome (HIGM) associated with increased cancer susceptibility. (PMID:24610295)
  • The p110delta PI3K-selective compound CAL-101 (Idelalisib) did not inhibit markers of PI3K activity in cancer or stromal cells. (PMID:24648465)

Cross-species orthologs

7 orthologs

OrganismSymbolGene ID
danio_reriopik3cdENSDARG00000003250
mus_musculusPik3cdENSMUSG00000039936
rattus_norvegicusPik3cdENSRNOG00000016846
drosophila_melanogasterPi3K68DFBGN0015278
drosophila_melanogasterPi3K92EFBGN0015279
caenorhabditis_elegansWBGENE00000090
caenorhabditis_elegansWBGENE00009552

Paralogs (9): PIK3C2A (ENSG00000011405), PIK3CB (ENSG00000051382), PIK3C3 (ENSG00000078142), PIK3CG (ENSG00000105851), PIK3CA (ENSG00000121879), PIK3C2B (ENSG00000133056), PIK3C2G (ENSG00000139144), PI4KB (ENSG00000143393), PI4KA (ENSG00000241973)

Mouse-model phenotypes

Observed phenotypes of the mouse ortholog (MGI:1098211) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 87 distinct phenotype terms.

Mouse phenotype (MP)Records
abnormal humoral immune response4
decreased IgM level3
decreased B-1 B cell number3
decreased B cell proliferation3
decreased IgG1 level3
abnormal B cell differentiation2
abnormal Peyer’s patch germinal center morphology2
decreased immunoglobulin level2
increased IgE level2
increased lymphocyte cell number2
decreased B cell number2
decreased CD4-positive, alpha-beta T cell number2
absent spleen germinal center2
increased response to antigen2
increased leukocyte cell number1
increased neutrophil cell number1
decreased leukocyte cell number1
abnormal intestinal epithelium morphology1
crypts of Lieberkuhn abscesses1
abnormal small intestine morphology1
abnormal intestinal mucosa morphology1
lymphoid hyperplasia1
enlarged spleen1
small spleen1
spleen hyperplasia1

+62 more (showing top 25).

Additional cross-species homologs

Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.

OrganismUniProtIdentityMethod
Bos taurusP3287199.8%Diamond
Pongo abeliiQ5RAY198.6%Diamond
Glycine maxP4234797.9%Diamond
Sus scrofaO0269794.9%Diamond
Arabidopsis thalianaQ0WPX985.7%Diamond
Candida albicans SC5314Q9UW2457.5%Diamond
Dictyostelium discoideumP5467754.3%Diamond
Saccharomyces cerevisiae S288CP3729745.1%Diamond
Schizosaccharomyces pombe 972h-P5052043.5%Diamond

Genomic neighbors (locus context)

Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).

SymbolTypeEntrez
PIK3CD-AS2ncRNA101929074
PIK3CD-AS1ncRNA644997
CLSTN1protein-coding22883
TMEM201protein-coding199953
SLC25A33protein-coding84275
CTNNBIP1-AS1ncRNA139355239
CTNNBIP1protein-coding56998
NMNAT1protein-coding64802
LZICprotein-coding84328
LINC02606ncRNA100506022

Protein

Protein identifiers

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform — O00329 (reviewed: O00329)

Alternative names: Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta

All UniProt accessions (9): A0A2K8FKV1, A0A8V8TM62, A0A8V8TML5, A0A8V8TMM0, A0A8V8TNP1, A0A8V8TNW9, B7ZM44, O00329, F8W9P4

UniProt curated annotations — full annotation on UniProt →

Function. Phosphoinositide-3-kinase (PI3K) phosphorylates phosphatidylinositol (PI) and its phosphorylated derivatives at position 3 of the inositol ring to produce 3-phosphoinositides. Uses ATP and PtdIns(4,5)P2 (phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Mediates immune responses. Plays a role in B-cell development, proliferation, migration, and function. Required for B-cell receptor (BCR) signaling. Mediates B-cell proliferation response to anti-IgM, anti-CD40 and IL4 stimulation. Promotes cytokine production in response to TLR4 and TLR9. Required for antibody class switch mediated by TLR9. Involved in the antigen presentation function of B-cells. Involved in B-cell chemotaxis in response to CXCL13 and sphingosine 1-phosphate (S1P). Required for proliferation, signaling and cytokine production of naive, effector and memory T-cells. Required for T-cell receptor (TCR) signaling. Mediates TCR signaling events at the immune synapse. Activation by TCR leads to antigen-dependent memory T-cell migration and retention to antigenic tissues. Together with PIK3CG participates in T-cell development. Contributes to T-helper cell expansion and differentiation. Required for T-cell migration mediated by homing receptors SELL/CD62L, CCR7 and S1PR1 and antigen dependent recruitment of T-cells. Together with PIK3CG is involved in natural killer (NK) cell development and migration towards the sites of inflammation. Participates in NK cell receptor activation. Plays a role in NK cell maturation and cytokine production. Together with PIK3CG is involved in neutrophil chemotaxis and extravasation. Together with PIK3CG participates in neutrophil respiratory burst. Plays important roles in mast-cell development and mast cell mediated allergic response. Involved in stem cell factor (SCF)-mediated proliferation, adhesion and migration. Required for allergen-IgE-induced degranulation and cytokine release. The lipid kinase activity is required for its biological function. Isoform 2 may be involved in stabilizing total RAS levels, resulting in increased ERK phosphorylation and increased PI3K activity.

Subunit / interactions. Heterodimer of a catalytic subunit PIK3CD and a p85 regulatory subunit (PIK3R1, PIK3R2 or PIK3R3). Interacts with ERAS. Interacts with HRAS. Interacts (via the catalytic domain) with FOXM1 isoform 5 (FOXM1D); FOXM1D also simultaneously binds to the PI3K regulatory subunit which relieves the inhibitory effect of the regulatory subunit on the kinase activity of the catalytic subunit.

Subcellular location. Cytoplasm.

Tissue specificity. In humans, the highest levels of expression are seen in peripheral blood mononuclear cells, spleen, and thymus, and low levels of expression in testes, uterus, colon, and small intestine but not in other tissues examined including prostate, heart, brain, and liver. Isoform 2 is expressed in normal thymus, lung and spleen tissues, and is detected at low levels in normal lysates from colon and ovarian biopsies, at elevated levels in lysates from colorectal tumors and is abundantly expressed in some ovarian tumors (at protein level). Both isoform 1 and isoform 2 are widely expressed. Isoform 1 is expressed predominantly in leukocytes.

Post-translational modifications. Autophosphorylation on Ser-1039 results in the almost complete inactivation of the lipid kinase activity.

Disease relevance. Immunodeficiency 14A with lymphoproliferation, autosomal dominant (IMD14A) [MIM:615513] A disorder characterized by recurrent respiratory infections, progressive airway damage, lymphopenia, increased circulating transitional B cells, increased immunoglobulin M, reduced immunoglobulin G2 levels in serum, and impaired vaccine responses. The disease is caused by variants affecting the gene represented in this entry. Immunodeficiency 14B, autosomal recessive (IMD14B) [MIM:619281] An autosomal recessive, primary immunodeficiency characterized by recurrent sinopulmonary infections apparent in early childhood. Some patients may develop inflammatory bowel disease or osteomyelitis. Immunological features include hypogammaglobulinemia, decreased levels of B cells, and evidence of impaired immune-mediated cytotoxicity and defective T-cell function. The disease is caused by variants affecting the gene represented in this entry. Roifman-Chitayat syndrome (ROCHIS) [MIM:613328] An autosomal recessive digenic disorder characterized by global developmental delay, variable neurologic features such as seizures and ataxia, optic atrophy, dysmorphic facial features, distal skeletal anomalies, and recurrent invasive infections due to combined immunodeficiency. The disease is caused by variants affecting distinct genetic loci, including the gene represented in this entry. Caused by the simultaneous occurrence of homozygous mutations in PIK3CD and KNSTRN.

Activity regulation. Activated by growth factors and cytokine receptors through a tyrosine-kinase-dependent mechanism. Activated by RAS. IC87114 inhibits lipid kinase activity and is selective in cells at doses up to 5-10 uM. IC87114 blocks T-cell receptor signaling in naive and memory T-cells and reduces cytokine production by memory T-cells.

Pathway. Phospholipid metabolism; phosphatidylinositol phosphate biosynthesis.

Miscellaneous. IC87114 inhibitor reduces passive cutaneous anaphylaxis, attenuates allergic airway inflammation and hyperresponsiveness and allergen induced rhinitis response. Inhibitors may have therapeutic potential for the treatment of immune system-mediated diseases such as auto-immune diseases, inflammation and allergy.

Similarity. Belongs to the PI3/PI4-kinase family.

Isoforms (2)

UniProt IDNamesCanonical?
O00329-11, p110-deltayes
O00329-22, p37-delta

RefSeq proteins (7): NP_001337163, NP_001337164, NP_001424475, NP_001424476, NP_001425267, NP_001426135, NP_005017* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000341PI3K_Ras-bd_domDomain
IPR000403PI3/4_kinase_cat_domDomain
IPR001263PI3K_accessory_domDomain
IPR002420PI3K-type_C2_domDomain
IPR003113PI3K_ABDDomain
IPR011009Kinase-like_dom_sfHomologous_superfamily
IPR015433PI3/4_kinaseFamily
IPR016024ARM-type_foldHomologous_superfamily
IPR018936PI3/4_kinase_CSConserved_site
IPR029071Ubiquitin-like_domsfHomologous_superfamily
IPR035892C2_domain_sfHomologous_superfamily
IPR036940PI3/4_kinase_cat_sfHomologous_superfamily
IPR037703PI3-kinase_delta_catDomain
IPR042236PI3K_accessory_sfHomologous_superfamily

Pfam: PF00454, PF00613, PF00792, PF00794, PF02192

Enzyme classification (BRENDA)

  • EC 2.7.1.137 — phosphatidylinositol 3-kinase (BRENDA: 29 organisms, 131 substrates, 146 inhibitors, 16 Km, 0 kcat entries)
  • EC 2.7.1.153 — phosphatidylinositol-4,5-bisphosphate 3-kinase (BRENDA: 12 organisms, 48 substrates, 96 inhibitors, 1 Km, 0 kcat entries)
  • EC 2.7.11.1 — non-specific serine/threonine protein kinase (BRENDA: 71 organisms, 682 substrates, 228 inhibitors, 23 Km, 6 kcat entries)

Substrate kinetics (BRENDA)

14 substrates with measured Km, best-characterized 14. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
ATP0.0007–0.6411
ATP0.03–447
PHOSPHATIDYLINOSITOL0.034–643
KKRAARATSNVFA0.013–0.0453
PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE0.004–152
PHOSPHATIDYLINOSITOL 4-PHOSPHATE0.009–102
PAH1 PHOSPHATIDATE PHOSPHATASE0.00022
RRRLSSLRA0.0036–0.00372
1,2-DIOCTANOYLPHOSPHATIDYLINOSITOL 4,5-DIPHOSPHA0.051
PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE0.0111
GTP0.461
KKRAARASSNVFA0.021
LYS-LYS-PHE-ASN-ARG-THR-LEU-SER-VAL-ALA0.00931
MYELIN BASIC PROTEIN0.1451

Catalyzed reactions (Rhea)

  • a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + ATP = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3-phosphate) + ADP + H(+) (RHEA:12709)
  • a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-4,5-bisphosphate) + ATP = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4,5-trisphosphate) + ADP + H(+) (RHEA:21292)
  • 1-octadecanoyl-2-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-sn-glycero-3-phospho-1D-myo-inositol 4,5-bisphosphate + ATP = 1-octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phospho-(1D-myo-inositol 3,4,5-triphosphate) + ADP + H(+) (RHEA:43396)

UniProt features (125 total): helix 56, strand 40, turn 9, domain 5, region of interest 4, mutagenesis site 3, modified residue 2, splice variant 2, sequence variant 2, chain 1, sequence conflict 1

Structure

Experimental structures (PDB)

20 structures by resolution:

PDBTitleMethodResolution (Å)
6PYRHuman PI3Kdelta in complex with Compound 2-10 …X-RAY DIFFRACTION2.21
8S3RHUMAN PI3KDELTA IN COMPLEX WITH PYRIDAZINONE INHIBITOR 7X-RAY DIFFRACTION2.28
7JISHUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 2FX-RAY DIFFRACTION2.42
8BCYHUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 13X-RAY DIFFRACTION2.43
9L3RHuman PI3KDELTA in complex with ZandelisibX-RAY DIFFRACTION2.5
6PYUHuman PI3Kdelta in complex with Compound 4-2 …X-RAY DIFFRACTION2.54
6OCOHUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 6X-RAY DIFFRACTION2.58
5DXUp110delta/p85alpha with GDC-0326X-RAY DIFFRACTION2.64
6G6WHUMAN PI3KDELTA IN COMPLEX WITH LIGAND LASW1976X-RAY DIFFRACTION2.72
9T07HUMAN PI3KDELTA IN COMPLEX WITH RoginolisibX-RAY DIFFRACTION2.75
6OCUHUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 29X-RAY DIFFRACTION2.77
7LM2HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 3CX-RAY DIFFRACTION2.79
5VLRCRYSTAL STRUCTURE OF PI3K DELTA IN COMPLEX WITH A TRIFLUORO-ETHYL-PYRAZOL-PYROLOTRIAZINE …X-RAY DIFFRACTION2.8
9GDIHUMAN PI3KDELTA IN COMPLEX WITH ISOCUMARIN INHIBITOR 10X-RAY DIFFRACTION2.81
5UBTCRYSTAL STRUCTURE OF PI3K DELTA IN COMPLEX WITH A …X-RAY DIFFRACTION2.83
5M6UHUMAN PI3KDELTA IN COMPLEX WITH LASW1579X-RAY DIFFRACTION2.85
9GCFHUMAN PI3KDELTA IN COMPLEX WITH ISOCUMARIN INHIBITOR CHF-6523X-RAY DIFFRACTION2.89
5T8Fp110delta/p85alpha with taselisib (GDC-0032)X-RAY DIFFRACTION2.91
7LQ1HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 28X-RAY DIFFRACTION2.96
9T1PHuman PI3Kdelta in complex with IOA-288X-RAY DIFFRACTION2.97

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-O00329-F188.210.69

Human Protein Atlas

Protein class: Enzymes, ENZYME proteins, Transferases, Kinases, Atypical kinases, Metabolic proteins, Predicted intracellular proteins, RAS pathway related proteins, Disease related genes, FDA approved drug targets, Small molecule drugs, Human disease related genes, Primary immunodeficiency

Protein evidence: Evidence at protein level

Subcellular location (HPA, imaging): vesicles; cytokinetic bridge; cytosol; microtubules; primary cilium; primary cilium tip

Antibody reliability (HPA): IH enhanced · IF approved

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (2)

TypePositions
Phosphotyrosine524
Phosphoserine1039

Mutagenesis-validated functional residues (3)

PositionPhenotype
894abolishes lipid and protein kinase activities.
1039abolishes autophosphorylation, no effect on lipid kinase activity.
1039abolishes autophosphorylation, reduced lipid kinase activity.

Function

Pathways and Gene Ontology

Reactome pathways

9 curated (TAS) of 39; 4 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).

39 pathways:

IDPathwayEvidence
R-HSA-2219530Constitutive Signaling by Aberrant PI3K in Cancer ⚕curated
R-HSA-389357CD28 dependent PI3K/Akt signalingcurated
R-HSA-9927354Co-stimulation by ICOScurated
R-HSA-912526Interleukin receptor SHC signalingcurated
R-HSA-512988Interleukin-3, Interleukin-5 and GM-CSF signalingcurated
R-HSA-6811558PI5P, PP2A and IER3 Regulate PI3K/AKT Signalingcurated
R-HSA-1257604PIP3 activates AKT signalingcurated
R-HSA-8853659RET signalingcurated
R-HSA-1660499Synthesis of PIPs at the plasma membranecurated
R-HSA-1643685Disease ⚕—
R-HSA-5663202Diseases of signal transduction by growth factor receptors and second messengers ⚕—
R-HSA-2219528PI3K/AKT Signaling in Cancer ⚕—
R-HSA-1280218Adaptive Immune System—
R-HSA-983695Antigen activates B Cell Receptor (BCR) leading to generation of second messengerselectronic
R-HSA-422475Axon guidance—
R-HSA-9855142Cellular responses to mechanical stimuli—
R-HSA-8953897Cellular responses to stimuli—
R-HSA-389356Co-stimulation by CD28—
R-HSA-1280215Cytokine Signaling in Immune system—
R-HSA-1266738Developmental Biology—
R-HSA-9027276Erythropoietin activates Phosphoinositide-3-kinase (PI3K)electronic
R-HSA-9856530High laminar flow shear stress activates signaling by PIEZO1 and PECAM1:CDH5:KDR in endothelial cellselectronic
R-HSA-168256Immune System—
R-HSA-451927Interleukin-2 family signaling—
R-HSA-9006925Intracellular signaling by second messengers—
R-HSA-1430728Metabolism—
R-HSA-556833Metabolism of lipids—
R-HSA-199418Negative regulation of the PI3K/AKT network—
R-HSA-9675108Nervous system development—
R-HSA-1483255PI Metabolism—
R-HSA-1483257Phospholipid metabolism—
R-HSA-388841Regulation of T cell activation by CD28 family—
R-HSA-912631Regulation of signaling by CBLelectronic
R-HSA-9860931Response of endothelial cells to shear stress—
R-HSA-162582Signal Transduction—
R-HSA-9680350Signaling by CSF1 (M-CSF) in myeloid cellselectronic
R-HSA-9006335Signaling by Erythropoietin—
R-HSA-449147Signaling by Interleukins—
R-HSA-983705Signaling by the B Cell Receptor (BCR)—

MSigDB gene sets: 914 (showing top): GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_MORPHOGENESIS_OF_AN_EPITHELIUM, GOBP_REGULATION_OF_CELL_ACTIVATION, REACTOME_INTERLEUKIN_2_FAMILY_SIGNALING, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_NATURAL_KILLER_CELL_DIFFERENTIATION, GOBP_PHOSPHATIDYLINOSITOL_METABOLIC_PROCESS, GOBP_VASCULAR_ENDOTHELIAL_GROWTH_FACTOR_SIGNALING_PATHWAY, GOBP_MYELOID_CELL_HOMEOSTASIS, PAX4_01, GOBP_MYELOID_LEUKOCYTE_MIGRATION, GOBP_CELL_CHEMOTAXIS, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_LEUKOCYTE_APOPTOTIC_PROCESS

GO Biological Process (49): natural killer cell differentiation (GO:0001779), positive regulation of cytokine production (GO:0001819), positive regulation of endothelial cell proliferation (GO:0001938), adaptive immune response (GO:0002250), mast cell chemotaxis (GO:0002551), respiratory burst involved in defense response (GO:0002679), protein phosphorylation (GO:0006468), inflammatory response (GO:0006954), immune response (GO:0006955), signal transduction (GO:0007165), positive regulation of endothelial cell migration (GO:0010595), positive regulation of gene expression (GO:0010628), T cell chemotaxis (GO:0010818), cell migration (GO:0016477), natural killer cell activation (GO:0030101), B cell differentiation (GO:0030183), T cell differentiation (GO:0030217), positive regulation of cell migration (GO:0030335), neutrophil chemotaxis (GO:0030593), T cell costimulation (GO:0031295), positive regulation of neutrophil apoptotic process (GO:0033031), natural killer cell chemotaxis (GO:0035747), B cell chemotaxis (GO:0035754), phosphatidylinositol-3-phosphate biosynthetic process (GO:0036092), vascular endothelial growth factor signaling pathway (GO:0038084), T cell activation (GO:0042110), B cell activation (GO:0042113), mast cell degranulation (GO:0043303), phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0043491), innate immune response (GO:0045087), positive regulation of angiogenesis (GO:0045766), phosphatidylinositol-mediated signaling (GO:0048015), T cell receptor signaling pathway (GO:0050852), B cell receptor signaling pathway (GO:0050853), mast cell differentiation (GO:0060374), neutrophil extravasation (GO:0072672), positive regulation of epithelial tube formation (GO:1905278), immune system process (GO:0002376), leukocyte mediated immunity (GO:0002443), lipid metabolic process (GO:0006629), chemotaxis (GO:0006935), cell surface receptor signaling pathway (GO:0007166), regulation of anatomical structure morphogenesis (GO:0022603), cell differentiation (GO:0030154), regulation of cell adhesion (GO:0030155), phosphatidylinositol phosphate biosynthetic process (GO:0046854), positive regulation of developmental process (GO:0051094), positive regulation of multicellular organismal process (GO:0051240), regulation of multicellular organismal development (GO:2000026)

GO Molecular Function (8): ATP binding (GO:0005524), 1-phosphatidylinositol-3-kinase activity (GO:0016303), 1-phosphatidylinositol-4-phosphate 3-kinase activity (GO:0035005), 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (GO:0046934), nucleotide binding (GO:0000166), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)

GO Cellular Component (5): cytoplasm (GO:0005737), cytosol (GO:0005829), plasma membrane (GO:0005886), phosphatidylinositol 3-kinase complex (GO:0005942), phosphatidylinositol 3-kinase complex, class IA (GO:0005943)

Reactome top-level categories

17 top-level categories:

CategoryPathways
Interleukin-3, Interleukin-5 and GM-CSF signaling2
Immune System2
Intracellular signaling by second messengers1
PI Metabolism1
PI3K/AKT Signaling in Cancer1
Co-stimulation by CD281
Signaling by Interleukins1
Negative regulation of the PI3K/AKT network1
Axon guidance1
Signaling by Erythropoietin1
Interleukin-2 family signaling1
Cytokine Signaling in Immune system1
Signaling by the B Cell Receptor (BCR)1
Response of endothelial cells to shear stress1
Regulation of T cell activation by CD28 family1
Phospholipid metabolism1
Metabolism of lipids1

GO top-level categories

showing 60 of 62 GO namespaces:

CategoryTerms
lymphocyte differentiation3
phosphatidylinositol kinase activity3
defense response2
cellular anatomical structure2
natural killer cell activation1
cytokine production1
regulation of cytokine production1
positive regulation of gene expression1
positive regulation of multicellular organismal process1
endothelial cell proliferation1
regulation of endothelial cell proliferation1
positive regulation of epithelial cell proliferation1
immune response1
leukocyte chemotaxis1
mast cell migration1
immune effector process1
respiratory burst1
phosphorylation1
protein modification process1
immune system process1
response to stimulus1
cell communication1
cellular process1
signaling1
regulation of cellular process1
cellular response to stimulus1
regulation of endothelial cell migration1
positive regulation of cell migration1
endothelial cell migration1
gene expression1
regulation of gene expression1
positive regulation of macromolecule biosynthetic process1
lymphocyte chemotaxis1
T cell migration1
cell motility1
lymphocyte activation1
B cell activation1
T cell activation1
cell migration1
regulation of cell migration1
positive regulation of cell motility1
granulocyte chemotaxis1
neutrophil migration1
lymphocyte costimulation1
positive regulation of T cell activation1
adenyl ribonucleotide binding1
purine ribonucleoside triphosphate binding1
anion binding1
phosphatidylinositol-3-phosphate biosynthetic process1
nucleoside phosphate binding1
heterocyclic compound binding1
binding1
transferase activity, transferring phosphorus-containing groups1
catalytic activity1
intracellular anatomical structure1
cytoplasm1
membrane1
cell periphery1
extrinsic component of membrane1
transferase complex, transferring phosphorus-containing groups1

Experimentally-supported GO annotations

GO terms backed by direct experimental evidence (ECO experimental codes) — 9 of 62 annotations. The rest are phylogenetic / computational / electronic (IEA).

9 experimentally-supported GO terms:

GO termNSEvidence
phosphatidylinositol 3-kinase/protein kinase B signal transductionBPmutant phenotype
positive regulation of cell migrationBPmutant phenotype
positive regulation of endothelial cell migrationBPgenetic interaction
positive regulation of endothelial cell proliferationBPgenetic interaction
positive regulation of epithelial tube formationBPgenetic interaction
positive regulation of gene expressionBPmutant phenotype
positive regulation of neutrophil apoptotic processBPmutant phenotype
vascular endothelial growth factor signaling pathwayBPgenetic interaction
cytosolCCdirect assay

Protein interactions and networks

STRING

showing 15 of 9,893 interactions by confidence (×1000):

Protein AProtein BPartner UniProtScore
PIK3CDAKT1P31749977
PIK3CDPTENP60484945
PIK3CDSTAT3P40763912
PIK3CDRPS6KB1P23443911
PIK3CDSRCP12931908
PIK3CDINSP01308893
PIK3CDEGFRP00533882
PIK3CDMAPK3P27361880
PIK3CDTP53P04637880
PIK3CDBCL2P10415880
PIK3CDTNFP01375865
PIK3CDCTNNB1P35222859
PIK3CDGSK3BP49841858
PIK3CDTGFB1P01137857
PIK3CDIL6P05231857

IntAct

Human interaction partners of PIK3CD in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).

11 partners by confidence:

PartnerInteraction typeMIscoreRecords
PIK3R1direct interaction0.89014
PIK3R3association0.8007
HRASphysical association0.4002
CD37physical association0.4001
NCK1physical association0.4001
DDR1association0.3502
SPP1association0.3501
ASCC2physical association0.0001
MCRIP2physical association0.0001
RALYphysical association0.0001
TNPO2physical association0.0001

BioGRID (36 interactions; top human partners by supporting records): PIK3R1 (Affinity Capture-MS; 5 records), PIK3R2 (Reconstituted Complex; 3 records), PIK3R3 (Affinity Capture-MS; 3 records), PIK3CG (Reconstituted Complex; 2 records), TAGLN (Affinity Capture-Western; 2 records), AKT2 (Co-fractionation), AOC3 (Negative Genetic), ASCC2 (Two-hybrid), CAMK1D (Negative Genetic), CRK (Affinity Capture-MS), DBH (Negative Genetic), ERAS (Affinity Capture-Western), GRM2 (Negative Genetic), HRAS (Two-hybrid), IGF1R (Negative Genetic)

SIGNOR signaling

showing 27 of 28 signaling interactions:

AEffectBMechanism
ERBB3up-regulatesPIK3CDbinding
ERBB4up-regulatesPIK3CDbinding
IC-87114down-regulatesPIK3CD“chemical inhibition”
HRASup-regulatesPIK3CDbinding
KRASup-regulatesPIK3CDbinding
dactolisibdown-regulatesPIK3CD“chemical inhibition”
pictrelisibdown-regulatesPIK3CD“chemical inhibition”
BKM120down-regulatesPIK3CD“chemical inhibition”
idelalisibdown-regulatesPIK3CD“chemical inhibition”
CH5132799down-regulatesPIK3CD“chemical inhibition”
1-[4-[[2-(2-amino-5-pyrimidinyl)-7-methyl-4-(4-morpholinyl)-6-thieno[3,2-d]pyrimidinyl]methyl]-1-piperazinyl]-2-hydroxy-1-propanonedown-regulatesPIK3CD“chemical inhibition”
GSK1059615down-regulatesPIK3CD“chemical inhibition”
GSK2126458down-regulatesPIK3CD“chemical inhibition”
PI-103down-regulatesPIK3CD“chemical inhibition”
PIK-294down-regulatesPIK3CD“chemical inhibition”
PIK-90down-regulatesPIK3CD“chemical inhibition”
PKI-402down-regulatesPIK3CD“chemical inhibition”
PP121down-regulatesPIK3CD“chemical inhibition”
3-[2,4-diamino-7-(3-hydroxyphenyl)-6-pteridinyl]phenoldown-regulatesPIK3CD“chemical inhibition”
XL765down-regulatesPIK3CD“chemical inhibition”
ZSTK-474down-regulatesPIK3CD“chemical inhibition”
ITGB4up-regulatesPIK3CDbinding
PIK3CDdown-regulatesPIK3CDphosphorylation
TNFup-regulatesPIK3CD
PIK3R1“up-regulates activity”PIK3CDbinding
PIK3CDup-regulatesSurvival
PI3K“up-regulates activity”PIK3CDbinding

Protein complexes (CORUM) (2)

Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).

2 complexes by size:

ComplexSubunitsMembers
★ PIK3CD-PIK3R1 complex2PIK3CD, PIK3R1
★ PIK3CD-PIK3R2 complex2PIK3CD, PIK3R2

Disease & clinical

Genetic variants

Variant evidence for PIK3CD: 968 ClinVar records (33 pathogenic / likely pathogenic); 54 ClinGen expert-panel interpretations; 9 GWAS associations. Per-variant detail is on Sugi Variant.

ClinVar

968 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic19
Likely pathogenic14
Uncertain significance370
Likely benign465
Benign39

Top pathogenic / likely-pathogenic (15)

Showing the 15 best-reviewed of 33 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.

Variant IDHGVSClassificationReviewSubmitters
88675NM_005026.5(PIK3CD):c.3061G>A (p.Glu1021Lys)Pathogenicreviewed by expert panel34
132807NM_005026.5(PIK3CD):c.1573G>A (p.Glu525Lys)Pathogenicreviewed by expert panel6
422410NM_005026.5(PIK3CD):c.3074A>G (p.Glu1025Gly)Pathogenicreviewed by expert panel3
582515NM_005026.5(PIK3CD):c.1574A>G (p.Glu525Gly)Likely pathogenicreviewed by expert panel4
132806NM_005026.5(PIK3CD):c.1002C>A (p.Asn334Lys)Likely pathogenicreviewed by expert panel3
1406866NM_005026.5(PIK3CD):c.1570T>A (p.Tyr524Asn)Likely pathogenicreviewed by expert panel3
578525NM_005026.5(PIK3CD):c.1002C>G (p.Asn334Lys)Likely pathogenicreviewed by expert panel2
1457684NM_005026.5(PIK3CD):c.1571A>C (p.Tyr524Ser)Likely pathogenicreviewed by expert panel2
2733822NM_005026.5(PIK3CD):c.371G>A (p.Gly124Asp)Likely pathogenicreviewed by expert panel2
4684966NM_005026.5(PIK3CD):c.241G>A (p.Glu81Lys)Likely pathogenicreviewed by expert panel1
4684967NM_005026.5(PIK3CD):c.1574A>C (p.Glu525Ala)Likely pathogenicreviewed by expert panel1
541084NM_005026.5(PIK3CD):c.236_237del (p.Gln79fs)Pathogeniccriteria provided, single submitter1
1500652NM_005026.5(PIK3CD):c.171_178del (p.Leu58fs)Pathogeniccriteria provided, single submitter1
2077526NM_005026.5(PIK3CD):c.767dup (p.Cys257fs)Pathogeniccriteria provided, single submitter1
2699590NM_005026.5(PIK3CD):c.2164G>T (p.Glu722Ter)Pathogeniccriteria provided, single submitter1

Per-variant reference — Sugi Variant

Explore PIK3CD’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.

ClinGen expert-panel interpretations (54)

Expert ACMG interpretations from Antibody Deficiencies VCEP for immunodeficiency 14 — a higher-authority tier than individual ClinVar submissions.

AssertionVariants
Pathogenic3
Likely Pathogenic9
Uncertain Significance18
Likely Benign19
Benign5

SpliceAI

Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 37 predictions of 2,174):

Position(s)EffectΔscoreSites
1:9653345donor_gain1.0000
1:9691572–9691573donor_loss1.00005
1:9710417acceptor_gain1.0000
1:9710422–9710423acceptor_loss1.00006
1:9710597–9710598donor_loss1.00004
1:9715770–9715771donor_loss1.00003
1:9716059donor_gain1.0000
1:9716438–9716439acceptor_loss1.00006
1:9716620–9716621donor_loss1.00005
1:9717109–9717110donor_loss1.00005

AlphaMissense

2,483 missense substitutions predicted likely pathogenic (of 6,879 scored), across 630 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:

ResidueLikely-pathogenic substitutionsMean am_pathogenicityMax am_pathogenicity
M90090.9700.999
M79790.9310.993
M75690.8860.995
D91180.9991.000
D78780.9980.999
D89380.9981.000
N89880.9981.000
H89580.9970.999
H90980.9971.000
D93780.9971.000
H103680.9971.000
F93280.9961.000
F87580.9941.000
D89780.9910.999
F95680.9911.000
H91480.9900.999
F93880.9900.999
D78280.9890.997
F85080.9890.999
F101580.9880.999

HPA cancer prognostics

RNA cancer specificity: Low cancer specificity

Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.

2 prognostic cancer types:

CancerPrognosticp-value
Kidney Renal Papillary Cell Carcinoma (TCGA)favorable5.14e-05
Pancreatic Adenocarcinoma (validation)unfavorable0.000214

Disease associations

OMIM: gene MIM:602839 | disease phenotypes: MIM:613328, MIM:619281, MIM:615513

GenCC curated gene-disease

2 curated gene-disease records:

DiseaseClassificationInheritanceRecords
immunodeficiency 14DefinitiveAutosomal dominant3
immunodeficiency 14b, autosomal recessiveStrongAutosomal recessive3

ClinGen Gene-Disease Validity

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

2 validity classifications:

DiseaseClassificationInheritance
immunodeficiency 14b, autosomal recessiveDefinitiveAR
immunodeficiency 14DefinitiveAD

Genomics England panels (PanelApp)

Clinical diagnostic gene panels including this gene (6 panels, 5 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.

6 panels:

PanelRating
COVID-19 researchgreen
Infantile enterocolitis & monogenic inflammatory bowel diseasegreen
Non-CF bronchiectasisgreen
Primary immunodeficiency or monogenic inflammatory bowel diseasegreen
Respiratory ciliopathies including non-CF bronchiectasisgreen
Gastrointestinal epithelial barrier disordersamber

Mondo (3): combined immunodeficiency with faciooculoskeletal anomalies (MONDO:0013226), immunodeficiency 14b, autosomal recessive (MONDO:0023655), immunodeficiency 14 (MONDO:0014222)

Orphanet (4): Combined immunodeficiency with facio-oculo-skeletal anomalies (Orphanet:221139), Activated PI3K-delta syndrome (Orphanet:397596), Activated PI3K-delta syndrome 1 (Orphanet:693661), Moyamoya angiopathy (Orphanet:477768)

HPO phenotypes

showing 60 of 142 phenotypes (HPO-id order):

HPOTerm
HP:0000006Autosomal dominant inheritance
HP:0000007Autosomal recessive inheritance
HP:0000010Recurrent urinary tract infections
HP:0000086Ectopic kidney
HP:0000122Unilateral renal agenesis
HP:0000218High palate
HP:0000246Sinusitis
HP:0000286Epicanthus
HP:0000306Abnormality of the chin
HP:0000316Hypertelorism
HP:0000348High forehead
HP:0000377Abnormal pinna morphology
HP:0000389Chronic otitis media
HP:0000411Protruding ear
HP:0000431Wide nasal bridge
HP:0000455Broad nasal tip
HP:0000463Anteverted nares
HP:0000470Short neck
HP:0000490Deeply set eye
HP:0000509Conjunctivitis
HP:0000609Optic nerve hypoplasia
HP:0000620Dacryocystitis
HP:0000648Optic atrophy
HP:0000924Abnormality of the skeletal system
HP:0000938Osteopenia
HP:0000953Hyperpigmentation of the skin
HP:0000988Skin rash
HP:0000998Hypertrichosis
HP:0001249Intellectual disability
HP:0001251Ataxia
HP:0001263Global developmental delay
HP:0001287Meningitis
HP:0001319Neonatal hypotonia
HP:0001369Arthritis
HP:0001508Failure to thrive
HP:0001537Umbilical hernia
HP:0001581Recurrent skin infections
HP:0001744Splenomegaly
HP:0001761Pes cavus
HP:0001875Decreased total neutrophil count
HP:0001894Thrombocytosis
HP:0001944Dehydration
HP:0001945Fever
HP:0001974Increased total leukocyte count
HP:0001999Abnormal facial shape
HP:0002007Frontal bossing
HP:0002014Diarrhea
HP:0002020Gastroesophageal reflux
HP:0002024Malabsorption
HP:0002028Chronic diarrhea
HP:0002037Inflammation of the large intestine
HP:0002058Myopathic facies
HP:0002080Intention tremor
HP:0002090Pneumonia
HP:0002100Recurrent aspiration pneumonia
HP:0002110Bronchiectasis
HP:0002119Ventriculomegaly
HP:0002123Generalized myoclonic seizure
HP:0002162Low posterior hairline
HP:0002205Recurrent respiratory infections

GWAS associations

9 associations:

StudyTraitp-value
GCST90002381_410Eosinophil count3e-27
GCST90002382_5Eosinophil percentage of white cells2e-19
GCST90002393_671Monocyte count2e-19
GCST004635_1Testicular germ cell tumor6e-13
GCST004625_2Monocyte count2e-9
GCST90002388_382Lymphocyte count4e-9
GCST002875_88Diisocyanate-induced asthma1e-6
GCST008888_1Systemising1e-6
GCST006304_1Irritable bowel syndrome3e-6

EFO canonical traits (from GWAS)

6 canonical traits:

EFO IDTrait name
EFO:0006995response to diisocyanate
EFO:0005091monocyte count
EFO:0010221systemising measurement
EFO:0004842eosinophil count
EFO:0007991eosinophil percentage of leukocytes
EFO:0004587lymphocyte count

MeSH disease descriptors

1 disease descriptors:

DescriptorNameTree numbers
C567641Roifman-Chitayat Syndrome *(supp.)*

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (7): CHEMBL2111432 (PROTEIN COMPLEX), CHEMBL3130 (SINGLE PROTEIN), CHEMBL3559703 (PROTEIN COMPLEX GROUP), CHEMBL3885617 (PROTEIN FAMILY), CHEMBL6193791 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195501 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195549 (PROTEIN-PROTEIN INTERACTION)

Drugs by curated mechanism of action (ChEMBL)

Drugs whose curated ChEMBL mechanism of action targets the PIK3CD protein itself — single-protein targets only (drugs acting on a protein family or complex that merely includes it are excluded). Includes antibodies and oligonucleotides that bioactivity screening does not capture.

18 curated-mechanism drugs:

DrugModalityMax phase
COPANLISIBSmall molecule4
DUVELISIB MONOHYDRATESmall molecule4
IDELALISIBSmall molecule4
LENIOLISIBSmall molecule4
UMBRALISIB TOSYLATESmall molecule4
PARSACLISIBSmall molecule3
ZANDELISIBSmall molecule3
ACALISIBSmall molecule2
AMG-319Small molecule2
FIMEPINOSTATSmall molecule2
GSK-2269557Small molecule2
INCB-40093Unknown2
NEMIRALISIBSmall molecule2
SELETALISIBSmall molecule2
TENALISIBSmall molecule2
TG100-115Small molecule2
AZD-8186Small molecule1
CAL-263Unknown1

Drugs acting on a complex or family that includes this protein

Curated ChEMBL mechanism-of-action drugs whose target is a protein complex or family of ≤10 members that includes PIK3CD — the drug acts on the assembly or class, not necessarily on this subunit alone.

26 drugs via a complex or family:

DrugTarget (ChEMBL)MembersMax phase
BUPARLISIBPI3-kinase class I83
DACTOLISIBPI3-kinase class I83
GEDATOLISIBPI3-kinase class I83
TASELISIBPI3-kinase class I83
APITOLISIBPI3-kinase class I82
AZD-6482PI3-kinase class I82
BGT-226PI3-kinase class I82
IZORLISIBPI3-kinase class I82
OMIPALISIBPI3-kinase class I82
PANULISIBPI3-kinase class I82
PAXALISIBPI3-kinase class I82
PF-04691502PI3-kinase class I82
PICTILISIBPI3-kinase class I82
PILARALISIBPI3-kinase class I82
RECILISIBPI3-kinase class I82
SAMOTOLISIBPI3-kinase class I82
SF-1126PI3-kinase class I82
SONOLISIBPI3-kinase class I82
VOXTALISIBPI3-kinase class I82
ZSTK-474PI3-kinase class I82
DS-7423PI3-kinase class I81
GSK-1059615PI3-kinase class I81
PUQUITINIB MESYLATE DIHYDRATEPI3-kinase class I81
PWT-33587PI3-kinase class I81
VS-5584PI3-kinase class I81
WX-037PI3-kinase class I81

Molecules with ChEMBL bioactivity

Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 342,127 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

showing 60 of 66 molecules by phase:

MoleculeNamePhasePatents
CHEMBL3218576COPANLISIB44,784
CHEMBL3545068COPANLISIB HYDROCHLORIDE41,392
CHEMBL3039502DUVELISIB45,625
CHEMBL2216870IDELALISIB410,756
CHEMBL3643413LENIOLISIB4379
CHEMBL3948730UMBRALISIB43,004
CHEMBL2396661ALPELISIB46,400
CHEMBL113CAFFEINE4202,768
CHEMBL5416410DASATINIB4674
CHEMBL4650215INAVOLISIB4937
CHEMBL535SUNITINIB480,232
CHEMBL1355736THEOPHYLLINE4754
CHEMBL4297615PARSACLISIB3712
CHEMBL2017974BUPARLISIB36,850
CHEMBL1879463DACTOLISIB38,349
CHEMBL592445GEDATOLISIB33,340
CHEMBL603469LESTAURTINIB3
CHEMBL5095079POVORCITINIB3237
CHEMBL2387080TASELISIB33,643
CHEMBL4303323ACALISIB21,291
CHEMBL4303596AMG-3192
CHEMBL3622533FIMEPINOSTAT2
CHEMBL2216859NEMIRALISIB2
CHEMBL4297648SELETALISIB2
CHEMBL4297584TENALISIB2
CHEMBL230011TG100-1152
CHEMBL4438249AMDIZALISIB2
CHEMBL1922094APITOLISIB2
CHEMBL2165191AZD-64822
CHEMBL4558527AZD-81542
CHEMBL3218578BGT-226 FREE BASE2
CHEMBL513909BI-25362
CHEMBL4084907BIMIRALISIB2
CHEMBL2216863DEZAPELISIB2
CHEMBL3984425EGANELISIB2
CHEMBL3188551GSK-26367712
CHEMBL1684984IZORLISIB2
CHEMBL4574601LINPERLISIB2
CHEMBL3115681NARAZACICLIB2
CHEMBL1236962OMIPALISIB2
CHEMBL3586404ONATASERTIB2
CHEMBL3813842PAXALISIB2
CHEMBL1234354PF-046915022
CHEMBL521851PICTILISIB2
CHEMBL3360203PILARALISIB2
CHEMBL2105763QUISINOSTAT2
CHEMBL475251R-4062
CHEMBL4800252RISOVALISIB2
CHEMBL3683575ROGINOLISIB2
CHEMBL4297181SAMOTOLISIB2
CHEMBL3545097SAPANISERTIB2
CHEMBL3935857SERABELISIB2
CHEMBL411907SONOLISIB2
CHEMBL2336325VISTUSERTIB2
CHEMBL3545366VOXTALISIB2
CHEMBL586702ZSTK-4742
CHEMBL3408248AZD-81861
CHEMBL4439259AZD-76481
CHEMBL3928407GS-99011
CHEMBL3544966GSK-10596151

PharmGKB: 1 entry (CPIC guideline: no)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: enzyme — Phosphatidylinositol kinases

Most potent curated ligand interactions (78 total), top 25:

LigandActionAffinityParameter
GSK2292767Inhibition10.1pKi
taselisibInhibition10.1pKi
KU-0060648Inhibition10.0pIC50
nemiralisibInhibition9.9pIC50
PF-06843195Inhibition9.55pKi
amdizalisibInhibition9.52pIC50
compound 15a [PMID: 32069401]Inhibition9.3pIC50
compound 20f [PMID: 28520415]Inhibition9.2pIC50
AZD8154Inhibition9.15pIC50
copanlisibInhibition9.15pIC50
compound (S)-29 [PMID: 37606563]Inhibition9.1pIC50
compound 5d [PMID: 31335136]Inhibition8.96pIC50
compound 82 [PMID: 21332118]Inhibition8.92pKi
compound 52 [PMID: 28541707]Inhibition8.77pIC50
CHF-6523Inhibition8.77pIC50
bosmolisibInhibition8.7pIC50
linperlisibInhibition8.62pIC50
RV6153Inhibition8.6pIC50
idelalisibInhibition8.6pIC50
duvelisibInhibition8.6pIC50
pictilisibInhibition8.52pIC50
PI-103Inhibition8.52pIC50
puquitinibInhibition8.48pIC50
compound 2q [PMID: 30986068]Inhibition8.41pIC50
panulisibInhibition8.4pIC50

Binding affinities (BindingDB)

3929 measured of 6097 human assays (6100 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
methyl (3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-(hydroxymethyl)pyrrolidine-1-carboxylateKI0.019 nMUS-9758538: Pyrimidine derivatives
2,2-difluoroethyl (3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-(hydroxymethyl)pyrrolidine-1-carboxylateKI0.021 nMUS-9758538: Pyrimidine derivatives
2-amino-1-[(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]-2-methylpropan-1-oneKI0.023 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
(2S)-2-[[2-[2-(2,2,2-trifluoroethyl)-1,2,4-triazol-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]propanamideKI0.023 nMUS-10112932: Benzoxazepin oxazolidinone compounds and methods of use
5-[7-[(3S)-3-methyl-1-methylsulfonylpyrrolidin-3-yl]-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-4-yl]pyrimidin-2-amineKI0.027 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
methyl (3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidine-1-carboxylateKI0.03 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
1-[(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]-2-hydroxy-2-methylpropan-1-oneKI0.03 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
(2S)-2-[[2-[(4S)-4-(fluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]propanamideKI0.04 nMUS-10112932: Benzoxazepin oxazolidinone compounds and methods of use
9-[1-methyl-5-[(3R)-4-methyl-3-propan-2-ylpiperazin-1-yl]pyrazol-4-yl]-2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepineIC500.048 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use
(2S)-2-[[2-[(4S)-4-(difluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]butanamideKI0.048 nMUS-10112932: Benzoxazepin oxazolidinone compounds and methods of use
(2S)-2-cyclopropyl-2-[[2-[(4S)-4-(fluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]acetamideKI0.051 nMUS-10112932: Benzoxazepin oxazolidinone compounds and methods of use
(2S)-2-cyclopropyl-2-[[2-[(4S)-4-(difluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]acetamideKI0.06 nMUS-10112932: Benzoxazepin oxazolidinone compounds and methods of use
1-[(3R)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]ethanoneKI0.078 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
tert-butyl (3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-methylpyrrolidine-1-carboxylateKI0.095 nMUS-9758538: Pyrimidine derivatives
12-[2-(1-methylpiperidin-2-yl)pyrrolidin-1-yl]-4-[5-methyl-2-(2,2,2-trifluoroethyl)-1,2,4-triazol-3-yl]-9-oxa-3,6,13-triazatricyclo[8.4.0.02,6]tetradeca-1(14),2,4,10,12-pentaeneIC500.102 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use
(2S)-2-[methyl-[2-(2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]amino]propanamideKI0.107 nMUS-10112932: Benzoxazepin oxazolidinone compounds and methods of use
(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-N-methylpyrrolidine-1-sulfonamideKI0.124 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-N,3-dimethylpyrrolidine-1-carboxamideKI0.124 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
1-[(3S)-3-[[6-(2-aminopyrimidin-5-yl)-2-morpholin-4-ylpyrimidin-4-yl]amino]-3-(hydroxymethyl)pyrrolidin-1-yl]-2-methylpropan-1-oneKI0.135 nMUS-9758538: Pyrimidine derivatives
5-[7-[(3S)-1-methylsulfonylpyrrolidin-3-yl]-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-4-yl]pyrimidin-2-amineKI0.153 nMUS-9260439: Dihydropyrrolopyrimidine derivatives
2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-9-[2-[(3R)-1-propan-2-ylpiperidin-3-yl]azetidin-1-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepineIC500.16 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use
9-(9-methyl-1,9-diazaspiro[4.5]decan-1-yl)-2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepineIC500.178 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use
(2S)-2-[[2-[2-(2,2,2-trifluoroethyl)-1,2,4-triazol-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]oxy]propanamideKI0.186 nMUS-10112932: Benzoxazepin oxazolidinone compounds and methods of use
2-[(1S)-1-[[6-amino-5-(2H-tetrazol-5-yl)pyrimidin-4-yl]amino]ethyl]-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-4-oneIC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
5-methyl-3-phenyl-2-[(1S)-1-[[5-(1H-pyrrolo[2,3-b]pyridin-5-yl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino]ethyl]-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-4-oneIC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
2-[(1S)-1-[[5-[1-(3-hydroxypropyl)pyrazol-4-yl]-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino]ethyl]-5-methyl-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-4-oneIC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
US9388189, 145IC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
N-[5-[4-amino-6-[[(1S)-1-(5-methyl-4-oxo-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-2-yl)ethyl]amino]pyrimidin-5-yl]-2-methoxy-3-pyridinyl]-4-hydroxybenzenesulfonamideIC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
US9388189, 163IC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
[3-hydroxy-5-(methanesulfonamido)phenyl] 4-amino-6-[[(1S)-1-(5-methyl-4-oxo-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-2-yl)ethyl]amino]pyrimidine-5-carboxylateIC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
N-[6-[4-[[(1S)-1-(5-methyl-4-oxo-3-phenyl-1,2-dihydropyrrolo[2,1-f][1,2,4]triazin-2-yl)ethyl]amino]-7H-pyrrolo[2,3-d]pyrimidin-5-yl]-1H-indol-4-yl]methanesulfonamideIC500.2 nMUS-9388189: Pyrrolotriazinone derivatives as PI3K inhibitors
(S)-4-acetyl-1-(5-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-fluorophenyl)-3,3,6- trimethylpiperazin-2-oneIC500.2 nMUS-10214537
(S)-4-acetyl-1-(5-(4-amino-5- chloropyrrolo[2,1-f][1,2,4]triazin-7- yl)-2-fluorophenyl)-3,3,6- trimethylpiperazin-2-oneIC500.2 nMUS-10214537
(S)-4-acetyl-1-(5-(4-amino-5-(1-((S)- 1,1,1-trifluoropropan-2-yl)-1H- pyrazol-5-yl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-fluorophenyl)-3,3,6- trimethylpiperazin-2-oneIC500.2 nMUS-10214537
(S)-4-acetyl-1-(5-(4-amino-5-(1- methyl-1H-pyrazol-4-yl)pyrrolo[2,1-f] [1,2,4]triazin-7-yl)-2-fluorophenyl)- 3,3,6-trimethylpiperazin-2-oneIC500.2 nMUS-10214537
2-(4-acetyl-3-ethyl-3-methyl-2- oxopiperazin-1-yl)-4-(4-amino-5- chloropyrrolo[2,1-f][1,2,4]triazin-7- yl)benzonitrileIC500.2 nMUS-10214537
(R)-2-(4-acetyl-3-ethyl-3-methyl-2- oxopiperazin-1-yl)-4-(4-amino-5- chloropyrrolo[2,1-f][1,2,4]triazin-7- yl)benzonitrileIC500.2 nMUS-10214537
(S)-2-(4-acetyl-3-ethyl-3-methyl-2- oxopiperazin-1-yl)-4-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)benzonitrileIC500.2 nMUS-10214537
4-[4-amino-5-(trifluoromethyl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]-2-(2,2,5-trimethyl-3-oxomorpholin-4-yl)benzonitrileIC500.2 nMUS-10214537
4-(4-amino-5-(1-(2,2,2-trifluoroethyl)- 1H-pyrazol-5-yl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-((5S,6S)-2,2,5,6- tetramethyl-3-oxomorpholino) benzonitrileIC500.2 nMUS-10214537
(R)-4-(4-amino-5-(trifluoromethyl) pyrrolo[2,1-f][1,2,4]triazin-7-yl)-2- (2,2,5-trimethyl-3-oxomorpholino) benzamideIC500.2 nMUS-10214537
N-(2-(4-(5-(4-amino-5-chloropyrrolo [2,1-f][1,2,4]triazin-7-yl)-2- fluorophenyl)-2,2-dimethyl-3- oxopiperazin-1-yl)-2-oxoethyl) acetamideIC500.2 nMUS-10214537
1-(3-(4-amino-5-chloropyrrolo[2,1-f] [1,2,4]triazin-7-yl)phenyl)-4-(3- hydroxy-3-methylbutanoyl)-3,3- dimethylpiperazin-2-oneIC500.2 nMUS-10214537
N-(2-(4-(5-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-cyanophenyl)-2,2- dimethyl-3-oxopiperazin-1-yl)-2- oxoethyl)methanesulfonamideIC500.2 nMUS-10214537
(S)-1-(5-(4-amino-5-chloropyrrolo [2,1-f][1,2,4]triazin-7-yl)-2- fluorophenyl)-3,3,6-trimethyl-4-(2- (methylsulfonyl)acetyl)piperazin-2-oneIC500.2 nMUS-10214537
4-acetyl-1-(5-(4-amino-5- (trifluoromethyl)pyrrolo[2,1-f][1,2,4] triazin-7-yl)-2-(methoxymethyl) phenyl)-3,3-dimethylpiperazin-2-oneIC500.2 nMUS-10214537
2-methyl-2-[3-[1-methyl-4-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrazol-5-yl]piperidin-1-yl]propan-1-olIC500.262 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use
N,N-dimethyl-1-[1-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrrolidin-2-yl]methanamineIC500.288 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use
2-methyl-2-[3-[5-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrazol-1-yl]piperidin-1-yl]propan-1-olIC500.292 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use
9-[1-methyl-5-(1-propan-2-ylpiperidin-3-yl)pyrazol-4-yl]-2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepineIC500.293 nMUS-9090628: Benzoxazepin compounds selective for PI3K P110 delta and methods of use

ChEMBL bioactivities

6100 potent at pChembl≥5 of 6100 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
11.00Ki0.01nMCHEMBL4850297
11.00Ki0.01nMCHEMBL4869783
10.90Ki0.01259nMCHEMBL4167702
10.80Ki0.01585nMCHEMBL4858875
10.70Ki0.02nMOMIPALISIB
10.62Ki0.024nMOMIPALISIB
10.60Ki0.02512nMCHEMBL4873390
10.60Ki0.02512nMCHEMBL4165185
10.60Ki0.02512nMCHEMBL4175571
10.50Ki0.03162nMCHEMBL4175737
10.40IC500.04nMCHEMBL4441003
10.40Ki0.03981nMCHEMBL4169192
10.37IC500.043nMCHEMBL5947580
10.37IC500.043nMCHEMBL5806327
10.32IC500.048nMCHEMBL3704739
10.30Ki0.05012nMCHEMBL4173087
10.30Ki0.05012nMCHEMBL4174874
10.22Ki0.06nMCHEMBL4864407
10.22IC500.06nMOMIPALISIB
10.20Ki0.0631nMCHEMBL4170075
10.15Ki0.07nMOMIPALISIB
10.10Ki0.07943nMCHEMBL4434674
10.10Ki0.07943nMCHEMBL4855234
10.10Ki0.08nMCHEMBL4860369
10.10IC500.08nMCHEMBL4434674
10.10Ki0.079nMTASELISIB
10.07IC500.086nMCHEMBL5927459
10.07IC500.086nMCHEMBL5878158
10.05IC500.09nMCHEMBL4868117
10.00IC500.1nMCHEMBL3403664
10.00IC500.1nMCHEMBL3805572
10.00IC500.1nMCHEMBL3805430
10.00IC500.1nMCHEMBL4541570
10.00Ki0.1nMCHEMBL5555605
10.00IC500.1nMCHEMBL3805760
9.99IC500.102nMCHEMBL3704656
9.97IC500.107nMCHEMBL3704656
9.97IC500.106nMCHEMBL3704656
9.92Ki0.12nMTASELISIB
9.91Ki0.122nMCHEMBL2331664
9.90Ki0.1259nMNEMIRALISIB
9.90Ki0.1259nMCHEMBL4867203
9.89IC500.13nMCHEMBL3805760
9.89Ki0.13nMCHEMBL4878958
9.85IC500.14nMCHEMBL6058341
9.85IC500.14nMCHEMBL5851512
9.82IC500.15nMCHEMBL3805664
9.80IC500.16nMCHEMBL3704723
9.75IC500.178nMCHEMBL3704706
9.74IC500.18nMCHEMBL4166144

PubChem BioAssay actives

4318 with measured affinity, of 6100 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
N-[3-[4-[[(1S)-1-(5-methyl-4-oxo-3-phenylquinazolin-2-yl)ethyl]amino]-7H-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]methanesulfonamide1553507: Inhibition of PI3Kdelta (unknown origin) preincubated for 30 mins followed by insulin stimulation for 5 mins by Western blot analysisic50<0.0001uM
N-[2-[2-fluoro-4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
N-[2-[4-[(4-tert-butylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
N-[2-[4-[(4-tert-butylpiperazin-1-yl)methyl]-2-fluorophenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
2-methoxy-5-morpholin-4-yl-N-[2-[4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]pyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
N-[2-[4-[[(2R,6S)-2,6-dimethylmorpholin-4-yl]methyl]-2-fluorophenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-3-pyridinyl]pyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[4-[[(3R,5S)-3,4,5-trimethylpiperazin-1-yl]methyl]phenyl]-3-pyridinyl]pyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[6-[(4-propan-2-ylpiperazin-1-yl)methyl]-3-pyridinyl]-3-pyridinyl]pyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
5-(3,6-dihydro-2H-pyran-4-yl)-N-[5-[4-[[(2R,6S)-2,6-dimethylmorpholin-4-yl]methyl]phenyl]-3-pyridinyl]-2-methoxypyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki<0.0001uM
2,4-difluoro-N-[2-methoxy-5-(4-pyridazin-4-ylquinolin-6-yl)-3-pyridinyl]benzenesulfonamide1994269: Inhibition of P13Kdelta (unknown origin) assessed as inhibition constantki<0.0001uM
2-amino-4-[[(1S)-1-(5-chloro-4-oxo-3-phenylquinazolin-2-yl)ethyl]amino]-6-methylpyrimidine-5-carbonitrile1299722: Inhibition human full length PI3Kdelta catalytic subunit/p85alpha assessed as formation of PIP3 after 30 mins by europium labeled GRP-based TR-FRET assayic500.0001uM
3-phenyl-2-[1-(7H-purin-6-ylamino)ethyl]quinolizin-4-one1553490: Inhibition of PI3Kdelta (unknown origin)ic500.0001uM
2-(4-ethylpiperazin-1-yl)-N-[4-(2-morpholin-4-yl-4-oxochromen-8-yl)dibenzothiophen-1-yl]acetamide768757: Inhibition of PI-3K delta (unknown origin)ic500.0001uM
2-[(1S)-1-[(6-amino-5-ethynylpyrimidin-4-yl)amino]ethyl]-5-chloro-3-phenylquinazolin-4-one1299722: Inhibition human full length PI3Kdelta catalytic subunit/p85alpha assessed as formation of PIP3 after 30 mins by europium labeled GRP-based TR-FRET assayic500.0001uM
N-[2-[3-fluoro-4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki0.0001uM
N-[2-[2-fluoro-4-[[4-(2-hydroxypropan-2-yl)piperidin-1-yl]methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki0.0001uM
N-[2-[2,3-difluoro-4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-4-pyridinyl]-2-methoxy-5-morpholin-4-ylpyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki0.0001uM
2-(4-acetyl-3,3-dimethyl-2-oxopiperazin-1-yl)-4-[4-amino-5-(trifluoromethyl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]benzonitrile1448761: Inhibition of PI3Kdelta (unknown origin) after 60 mins using fluorescein-labeled kinase tracer by HTRF assayic500.0001uM
2-methoxy-5-morpholin-4-yl-N-[5-[4-[(4-propan-2-ylpiperazin-1-yl)methyl]phenyl]-3-pyridinyl]pyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki0.0001uM
2-[(S)-cyclopropyl-(7H-purin-6-ylamino)methyl]-5-methyl-3-phenylquinazolin-4-one1777368: Inhibition of recombinant human full length His-tagged p110delta/p85alpha expressed in baculovirus expression system measured after 60 mins in presence of ATP by ATP-competitive binding assayic500.0001uM
5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-[5-[4-(piperazin-1-ylmethyl)phenyl]-3-pyridinyl]pyridine-3-sulfonamide1768974: Inhibition of recombinant human N-terminal His6-tagged full length P110delta/full length untagged human p85alpha expressed in baculovirus infected Sf21 insect cells using PIP2 as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by HTRF assayki0.0001uM
5-[(1S)-1-[4-amino-3-(3-fluoro-5-hydroxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-2-tert-butyl-4-chloropyridazin-3-one2065839: Inhibition of recombinant human PI3Kdelta using L-alpha-phosphatidylinositol sodium salt and L-alpha-phosphatidyl-L-serine as substrate incubated for 60 mins in presence of ATP by ADP-glo kinase assayki0.0001uM
1-[1-[(2S)-2-hydroxypropanoyl]piperidin-4-yl]-3-methyl-8-(6-methyl-3-pyridinyl)imidazo[4,5-c][1,5]naphthyridin-2-one731922: Inhibition of human PI3Kdeltaki0.0001uM
N-[5-[4-[5-[[(2S,6R)-2,6-dimethylmorpholin-4-yl]methyl]-1,3-oxazol-2-yl]-1H-indazol-6-yl]-2-methoxy-3-pyridinyl]methanesulfonamide1586658: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate preincubated for 15 mins followed by substrate addition measured after 60 mins by HTRF methodki0.0001uM
2-[6-(1H-indol-4-yl)-1H-indazol-4-yl]-5-[(4-propan-2-ylpiperazin-1-yl)methyl]-1,3-oxazole1586658: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate preincubated for 15 mins followed by substrate addition measured after 60 mins by HTRF methodki0.0001uM
4-amino-6-[[(1S)-1-(6-fluoro-4-methylsulfonyl-3-phenylquinolin-2-yl)ethyl]amino]pyrimidine-5-carbonitrile1192865: Inhibition of PI3Kdelta (unknown origin) assessed as inhibition of AKT phosphorylation by cell-based HTRF assayic500.0001uM
2-methyl-2-[4-[2-(5-methyl-2-propan-2-yl-1,2,4-triazol-3-yl)-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl]pyrazol-1-yl]propanamide750479: Inhibition of PI3Kdelta (unknown origin)ki0.0001uM
2,4-diamino-6-[[(1S)-1-[5-chloro-4-oxo-3-(1H-pyrazol-5-yl)quinazolin-2-yl]ethyl]amino]pyrimidine-5-carbonitrile1438035: Inhibition of human full length PI3K p110delta/p85 alpha using PIP2/ATP as substrate after 30 mins by TR-FRET assayic500.0002uM
2-[(1S)-1-[[6-amino-5-(2H-tetrazol-5-yl)pyrimidin-4-yl]amino]ethyl]-3-phenylpyrrolo[2,1-f][1,2,4]triazin-4-one1553507: Inhibition of PI3Kdelta (unknown origin) preincubated for 30 mins followed by insulin stimulation for 5 mins by Western blot analysisic500.0002uM
N-[5-[2-amino-4-methyl-8-[(3R)-oxolan-3-yl]oxyquinazolin-6-yl]-2-methoxy-3-pyridinyl]-2,4-difluorobenzenesulfonamide1355493: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate by ADP-Glo assayic500.0002uM
N-[5-[2-amino-4-methyl-8-(oxan-4-yloxy)quinazolin-6-yl]-2-methoxy-3-pyridinyl]-2,4-difluorobenzenesulfonamide1355493: Inhibition of PI3Kdelta (unknown origin) using PIP2 as substrate by ADP-Glo assayic500.0002uM
2-amino-N-[7-methoxy-8-(3-morpholin-4-ylpropoxy)-2,3-dihydro-1H-imidazo[1,2-c]quinazolin-5-ylidene]pyrimidine-5-carboxamide1560711: Inhibition of human full-length His-tagged p110delta/p85alpha expressed in baculovirus expression system using PIP2 as substrate measured after 1 hr by ADP-glo assayic500.0002uM
4-[4-amino-5-(trifluoromethyl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]-2-[(5S,6R)-2,2,5,6-tetramethyl-3-oxomorpholin-4-yl]benzonitrile1469862: Inhibition of PI3Kdelta (unknown origin) after 60 mins using fluorescein-labeled kinase tracer by HTRF assayic500.0002uM
4-[2-[2-[(1S)-1-[(2,6-diamino-5-cyanopyrimidin-4-yl)amino]propyl]-4-oxo-3-phenylquinazolin-5-yl]ethyl]-N-hydroxybenzamide1605952: Inhibition of human PI3Kdelta assessed as reduction in PIP3 product complex formation by measuring displacement of biotin-labelled PIP3 from complex using PIP2 as substrate measured after 30 mins in presence of ATP by HTRF assayic500.0002uM
6-[2-[(1S)-1-[(2-amino-5-cyano-6-methylpyrimidin-4-yl)amino]propyl]-4-oxo-3-phenylquinazolin-5-yl]-N-hydroxyhexanamide1605952: Inhibition of human PI3Kdelta assessed as reduction in PIP3 product complex formation by measuring displacement of biotin-labelled PIP3 from complex using PIP2 as substrate measured after 30 mins in presence of ATP by HTRF assayic500.0002uM
N-hydroxy-6-[4-oxo-3-phenyl-2-[(1S)-1-(7H-purin-6-ylamino)propyl]quinazolin-5-yl]hexanamide1605952: Inhibition of human PI3Kdelta assessed as reduction in PIP3 product complex formation by measuring displacement of biotin-labelled PIP3 from complex using PIP2 as substrate measured after 30 mins in presence of ATP by HTRF assayic500.0002uM
2-methoxy-N-[2-methoxy-5-[7-[[(2R)-4-(oxetan-3-yl)morpholin-2-yl]methoxy]-1,3-dihydro-2-benzofuran-5-yl]-3-pyridinyl]ethanesulfonamide1528687: Binding affinity to PI3Kdelta in human HL60 cell extract measured after 2 hrs by kinobeads based pull down assaykd0.0002uM
4-amino-6-[[(1S)-1-(3-chloro-6-phenylimidazo[1,2-a]pyridin-7-yl)ethyl]amino]pyrimidine-5-carbonitrile1553490: Inhibition of PI3Kdelta (unknown origin)ic500.0002uM
N-[2-chloro-5-(4-imidazol-1-ylcinnolin-6-yl)-3-pyridinyl]benzenesulfonamide1765908: Inhibition of PI3Kdelta (unknown origin)ic500.0002uM
5-[(1S)-1-[4-amino-3-(3-fluoro-5-hydroxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-2-tert-butyl-4-methoxypyridazin-3-one2065839: Inhibition of recombinant human PI3Kdelta using L-alpha-phosphatidylinositol sodium salt and L-alpha-phosphatidyl-L-serine as substrate incubated for 60 mins in presence of ATP by ADP-glo kinase assayki0.0002uM
3-[(1S)-1-[4-amino-3-(5-hydroxy-3-pyridinyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-4-[1-[(3,5-dimethyl-1,2-oxazol-4-yl)sulfonyl]-3,6-dihydro-2H-pyridin-5-yl]isochromen-1-one2249906: Inhibition of recombinant human PI3Kdelta using L-alpha-phosphatidylinositol sodium salt and L-alpha-phosphatidyl-L-serine as substrate incubated for 60 mins in presence of ATP by ADP-glo kinase assayki0.0002uM
4-[3-[[2-(2-ethylbenzimidazol-1-yl)-9-methyl-6-morpholin-4-ylpurin-8-yl]methyl]azetidin-1-yl]thiane 1,1-dioxide764682: Inhibition of PI3Kdelta (unknown origin) assessed as formation of PIP3 by competitive fluorescence polarization assayki0.0002uM
4-amino-6-[[(1S)-1-[6-fluoro-3-phenyl-4-(piperazine-1-carbonyl)quinolin-2-yl]ethyl]amino]pyrimidine-5-carbonitrile1628650: Inhibition of polyHis tagged full length recombinant PI3Kdelta (unknown origin) expressed in Sf9 cells co-expressing p85 incubated for 20 mins by alpha screen assayic500.0002uM
4-amino-6-[[(1S)-1-[6-fluoro-4-(2-methylsulfonylethylamino)-3-phenylquinolin-2-yl]ethyl]amino]pyrimidine-5-carbonitrile1192861: Inhibition of PI3Kdelta (unknown origin) by biochemical Alphascreen assayic500.0002uM
Duvelisib1994225: Inhibition of P13Kdelta (unknown origin)ic500.0002uM
4-amino-6-[[(1S)-1-(6-fluoro-1-phenylbenzimidazol-2-yl)ethyl]amino]pyrimidine-5-carbonitrile719910: Inhibition of PI3Kdeltaki0.0002uM
1-[(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-3-methylpyrrolidin-1-yl]-2-methylpropan-1-one1707453: Inhibition of recombinant human PI3K p110delta/p85alpha using phosphatidylinositol 4,5-bisphosphate as substrate preincubated for 15 mins followed by addition of ATP and measured after 30 mins by fluorescence polarisation assayki0.0003uM
5-[7-[(3S)-3-methyl-1-methylsulfonylpyrrolidin-3-yl]-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-4-yl]pyrimidin-2-amine1707453: Inhibition of recombinant human PI3K p110delta/p85alpha using phosphatidylinositol 4,5-bisphosphate as substrate preincubated for 15 mins followed by addition of ATP and measured after 30 mins by fluorescence polarisation assayki0.0003uM
(3S)-3-[4-(2-aminopyrimidin-5-yl)-2-morpholin-4-yl-5,6-dihydropyrrolo[2,3-d]pyrimidin-7-yl]-N,3-dimethylpyrrolidine-1-sulfonamide1707453: Inhibition of recombinant human PI3K p110delta/p85alpha using phosphatidylinositol 4,5-bisphosphate as substrate preincubated for 15 mins followed by addition of ATP and measured after 30 mins by fluorescence polarisation assayki0.0003uM

CTD chemical–gene interactions

70 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Benzo(a)pyreneincreases expression, increases methylation, affects methylation, decreases expression5
sodium arseniteaffects methylation, increases abundance, increases expression3
Cannabidiolaffects cotreatment, decreases expression3
Tretinoinincreases expression3
Valproic Acidaffects expression, increases expression, increases methylation3
moringinaffects cotreatment, decreases expression2
trichostatin Aaffects expression, increases expression2
Arsenicincreases expression, increases abundance2
Ozoneincreases abundance, increases expression, affects cotreatment, decreases expression2
GSK-J4increases expression1
dicrotophosincreases expression1
tylophorineincreases expression1
triphenyl phosphateaffects expression1
bis(tri-n-butyltin)oxidedecreases expression1
bisphenol Adecreases methylation1
2,2’-methylenebis(4-methyl-6-tert-butylphenol)affects expression, affects response to substance1
terbufosincreases methylation1
sulforaphanedecreases expression1
cobaltous chloridedecreases expression1
ochratoxin Adecreases expression1
benzo(e)pyreneincreases methylation1
potassium chromate(VI)affects cotreatment, decreases expression1
aflatoxin B2increases methylation1
S-(1,2-dichlorovinyl)cysteineaffects cotreatment, decreases expression1
epigallocatechin gallateaffects cotreatment, decreases expression1
celastroldecreases expression1
tamibaroteneincreases expression1
yessotoxinincreases expression1
perfluorooctane sulfonic aciddecreases expression1
gedunindecreases expression1

ChEMBL screening assays

1111 unique, capped per target: 1094 binding, 8 admet, 8 functional, 1 toxicity

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1261702BindingInhibition of P110delta/p85-alphaDiscovery of 1-(4-(4-propionylpiperazin-1-yl)-3-(trifluoromethyl)phenyl)-9-(quinolin-3-yl)benzo[h][1,6]naphthyridin-2(1H)-one as a highly potent, selective mammalian target of rapamycin (mTOR) inhibitor for the treatment of cancer. — *J Med Chem*
CHEMBL4403972ADMETInhibition of AlexaFluor-labeled tracer 236 binding to full-length human His-tagged p110delta/p85alpha expressed in baculovirus expression system measured after 60 mins by LanthaScreen assayThe Discovery of 7-Methyl-2-[(7-methyl[1,2,4]triazolo[1,5-a]pyridin-6-yl)amino]-9-(tetrahydro-2H-pyran-4-yl)-7,9-dihydro-8H-purin-8-one (AZD7648), a Potent and Selective DNA-Dependent Protein Kinase (DNA-PK) Inhibitor. — *J Med Chem*
CHEMBL5123070ToxicityInhibition of human PI3Kdelta by ADP-Glo assayDiscovery of novel 7,8-dihydropteridine-6(5H)-one-based DNA-PK inhibitors as potential anticancer agents via scaffold hopping strategy. — *Eur J Med Chem*

Cellosaurus cell lines

16 cell lines: 14 cancer cell line, 2 induced pluripotent stem cell

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_0093RS4;11Cancer cell lineFemale
CVCL_B7YRAbcam Raji PIK3CD KOCancer cell lineMale
CVCL_B9ZGAbcam THP-1 PIK3CD KOCancer cell lineMale
CVCL_C0C4CHCMUi001-AInduced pluripotent stem cellFemale
CVCL_C7B5Abcam PC-3 PIK3CD KOCancer cell lineMale
CVCL_D4ZRSDQLCHi068-AInduced pluripotent stem cellMale
CVCL_D7XAUbigene A-549 PIK3CD KOCancer cell lineMale
CVCL_D8SRUbigene HCT 116 PIK3CD KOCancer cell lineMale
CVCL_E0KLUbigene HeLa PIK3CD KOCancer cell lineFemale
CVCL_E8JJRS4;11 mouse MCL1Cancer cell lineFemale

Clinical trials (associated diseases)

Via MONDO — disease-level, not drug-specific.

5 trials:

NCTPhaseStatusTitle
NCT05438407Phase 3ACTIVE_NOT_RECRUITINGPediatric Patients Aged 4 to 11 Years With APDS
NCT05693129Phase 3ACTIVE_NOT_RECRUITINGPediatric Patients Aged 1 to 6 Years With APDS
NCT02593539Phase 2COMPLETEDSafety, Pharmacokinetic (PK) and Pharmacodynamic (PD) Study of Repeat Doses of Inhaled Nemiralisib in Patients With APDS/PASLI
NCT03383380Phase 1/2COMPLETEDRapamycin Treatment for Activated Phosphoinositide 3-Kinase δ Syndrome
NCT06694363Not specifiedRECRUITINGNew Biomarker-based Strategy to Screen and Monitor for Activated Phosphoinositide 3-kinase δ Syndrome

Predicted chemistry — Sugi Predict

The predicted patent-compound landscape for PIK3CD across ~30M SureChEMBL compounds — explore on Sugi Predict.