PIK3CD-AS2

Summary

PIK3CD-AS2 (PIK3CD antisense RNA 2, HGNC:51334) is a long non-coding RNA gene on chromosome 1p36.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51334
Approved symbol	PIK3CD-AS2
Name	PIK3CD antisense RNA 2
Location	1p36.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231789
Ensembl biotype	lncRNA
Entrez	101929074
RNAcentral	URS00007E3AB7 — lncRNA, 958 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000415330, ENST00000775830, ENST00000775831

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000415330 — 3 exons

Exon	Start	End
ENSE00003455420	9672405	9672719
ENSE00003987853	9680712	9681135
ENSE00004143074	9687335	9687604

Expression profiles

Bgee: expression breadth ubiquitous, 152 present calls, max score 85.10.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 5.4703 / max 59.4981, expressed in 1150 samples.

FANTOM5 promoters (5 alternative TSS)

Promoter ID	TPM avg	Samples expressed
10228	4.7172	1070
10226	0.3566	241
10225	0.1921	90
10227	0.1259	52
10224	0.0786	17

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.10	gold quality
sural nerve	UBERON:0015488	72.68	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	72.01	gold quality
stromal cell of endometrium	CL:0002255	71.35	gold quality
colonic epithelium	UBERON:0000397	69.73	silver quality
left ovary	UBERON:0002119	69.69	gold quality
bone marrow cell	CL:0002092	69.42	silver quality
islet of Langerhans	UBERON:0000006	69.32	gold quality
left lobe of thyroid gland	UBERON:0001120	69.27	gold quality
body of pancreas	UBERON:0001150	69.26	gold quality
pancreas	UBERON:0001264	68.70	gold quality
thyroid gland	UBERON:0002046	67.90	gold quality
right lobe of thyroid gland	UBERON:0001119	66.74	gold quality
right ovary	UBERON:0002118	66.12	gold quality
adenohypophysis	UBERON:0002196	66.04	gold quality
adult mammalian kidney	UBERON:0000082	65.10	gold quality
lymph node	UBERON:0000029	64.72	gold quality
ovary	UBERON:0000992	64.66	gold quality
pituitary gland	UBERON:0000007	64.26	gold quality
adrenal tissue	UBERON:0018303	63.68	gold quality
ectocervix	UBERON:0012249	63.01	gold quality
body of uterus	UBERON:0009853	62.84	gold quality
minor salivary gland	UBERON:0001830	62.83	gold quality
cortical plate	UBERON:0005343	62.83	gold quality
metanephros cortex	UBERON:0010533	62.77	gold quality
endocervix	UBERON:0000458	62.75	gold quality
cortex of kidney	UBERON:0001225	62.32	gold quality
gall bladder	UBERON:0002110	61.86	gold quality
right adrenal gland	UBERON:0001233	61.25	gold quality
lower esophagus mucosa	UBERON:0035834	61.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.07

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.