PINX1-DT

Summary

PINX1-DT (PINX1 divergent transcript, HGNC:55532) is a long non-coding RNA gene on chromosome 8p23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55532
Approved symbol	PINX1-DT
Name	PINX1 divergent transcript
Location	8p23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253695
Ensembl biotype	lncRNA
Entrez	101929229
RNAcentral	URS00007E4DBB — lncRNA, 445 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 24 — 24 lncRNA

ENST00000522026, ENST00000655622, ENST00000821831, ENST00000821832, ENST00000821833, ENST00000821834, ENST00000821835, ENST00000821836, ENST00000821837, ENST00000821838, ENST00000821839, ENST00000821840, ENST00000821841, ENST00000821842, ENST00000821843, ENST00000821844, ENST00000821845, ENST00000821846, ENST00000821847, ENST00000821848, ENST00000821849, ENST00000821850, ENST00000821851, ENST00000821852

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000522026 — 4 exons

Exon	Start	End
ENSE00002114815	10841633	10841734
ENSE00004229012	10839897	10840026
ENSE00004229016	10840561	10840628
ENSE00004229019	10846218	10847594

Expression profiles

Bgee: expression breadth broad, 77 present calls, max score 83.74.

Top tissues by expression

189 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.74	gold quality
sperm	CL:0000019	83.29	gold quality
tibialis anterior	UBERON:0001385	68.52	silver quality
epithelial cell of pancreas	CL:0000083	68.09	gold quality
pancreatic ductal cell	CL:0002079	65.00	silver quality
cardiac muscle of right atrium	UBERON:0003379	64.95	gold quality
upper arm skin	UBERON:0004263	63.46	gold quality
left ventricle myocardium	UBERON:0006566	62.56	gold quality
cortical plate	UBERON:0005343	62.05	silver quality
right testis	UBERON:0004534	61.31	gold quality
left testis	UBERON:0004533	60.70	gold quality
ganglionic eminence	UBERON:0004023	60.38	silver quality
testis	UBERON:0000473	59.58	gold quality
ileal mucosa	UBERON:0000331	59.01	silver quality
ventricular zone	UBERON:0003053	58.81	silver quality
endothelial cell	CL:0000115	58.45	gold quality
adult organism	UBERON:0007023	56.17	silver quality
myocardium	UBERON:0002349	55.65	gold quality
epithelium of nasopharynx	UBERON:0001951	54.46	gold quality
quadriceps femoris	UBERON:0001377	54.16	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
vastus lateralis	UBERON:0001379	52.91	gold quality
nasal cavity epithelium	UBERON:0005384	51.67	gold quality
prefrontal cortex	UBERON:0000451	51.11	gold quality
upper leg skin	UBERON:0004262	50.85	silver quality
lateral globus pallidus	UBERON:0002476	49.56	gold quality
islet of Langerhans	UBERON:0000006	49.30	gold quality
muscle of leg	UBERON:0001383	49.15	silver quality
pancreas	UBERON:0001264	48.12	gold quality
monocyte	CL:0000576	47.84	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.