PITPNM2-AS1

Summary

PITPNM2-AS1 (PITPNM2 antisense RNA 1, HGNC:53391) is a long non-coding RNA gene on chromosome 12q24.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53391
Approved symbol	PITPNM2-AS1
Name	PITPNM2 antisense RNA 1
Location	12q24.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251497
Ensembl biotype	lncRNA
Entrez	100507091
RNAcentral	URS00001ED869 — lncRNA, 2191 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000506255, ENST00000537292, ENST00000826239

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000506255 — 3 exons

Exon	Start	End
ENSE00002021091	123081384	123081992
ENSE00002030806	123083235	123084744
ENSE00002080054	123082888	123082959

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 97.02.

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	97.02	gold quality
colonic epithelium	UBERON:0000397	69.26	silver quality
right testis	UBERON:0004534	65.28	gold quality
left testis	UBERON:0004533	63.99	gold quality
testis	UBERON:0000473	63.84	gold quality
cortical plate	UBERON:0005343	63.81	gold quality
skeletal muscle tissue	UBERON:0001134	63.55	silver quality
urinary bladder	UBERON:0001255	62.14	silver quality
uterine cervix	UBERON:0000002	59.38	silver quality
tonsil	UBERON:0002372	58.61	silver quality
liver	UBERON:0002107	58.53	gold quality
leukocyte	CL:0000738	56.94	silver quality
hindlimb stylopod muscle	UBERON:0004252	56.37	silver quality
ganglionic eminence	UBERON:0004023	55.81	silver quality
calcaneal tendon	UBERON:0003701	54.66	silver quality
blood	UBERON:0000178	53.65	silver quality
kidney	UBERON:0002113	51.58	gold quality
endometrium	UBERON:0001295	51.03	gold quality
right lobe of liver	UBERON:0001114	50.71	gold quality
thoracic mammary gland	UBERON:0005200	50.23	gold quality
primary visual cortex	UBERON:0002436	50.08	silver quality
islet of Langerhans	UBERON:0000006	49.20	gold quality
superior frontal gyrus	UBERON:0002661	49.16	gold quality
lymph node	UBERON:0000029	48.53	silver quality
multicellular organism	UBERON:0000468	48.53	gold quality
lung	UBERON:0002048	48.21	gold quality
prefrontal cortex	UBERON:0000451	48.17	gold quality
muscle of leg	UBERON:0001383	47.96	gold quality
apex of heart	UBERON:0002098	47.43	gold quality
pancreas	UBERON:0001264	47.23	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.