PKMYT1AR

Summary

PKMYT1AR (PKMYT1 associated lncRNA, HGNC:56847) is a long non-coding RNA gene on chromosome 19q13.43.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56847
Approved symbol	PKMYT1AR
Name	PKMYT1 associated lncRNA
Location	19q13.43
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000268266
Ensembl biotype	lncRNA
Entrez	130572098
RNAcentral	URS0002A3E80C — lncRNA, 935 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000594562, ENST00000595422, ENST00000790367

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000594562 — 2 exons

Exon	Start	End
ENSE00004170567	57481881	57482036
ENSE00004170569	57477308	57478086

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 68.85.

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortical plate	UBERON:0005343	68.85	gold quality
ventricular zone	UBERON:0003053	66.67	gold quality
ganglionic eminence	UBERON:0004023	66.33	gold quality
prefrontal cortex	UBERON:0000451	61.39	gold quality
lymph node	UBERON:0000029	59.24	gold quality
superior frontal gyrus	UBERON:0002661	57.79	gold quality
islet of Langerhans	UBERON:0000006	57.46	gold quality
smooth muscle tissue	UBERON:0001135	56.48	gold quality
frontal cortex	UBERON:0001870	55.44	gold quality
duodenum	UBERON:0002114	55.29	gold quality
monocyte	CL:0000576	55.19	gold quality
leukocyte	CL:0000738	55.19	gold quality
stromal cell of endometrium	CL:0002255	55.15	gold quality
urinary bladder	UBERON:0001255	54.92	gold quality
cerebellum	UBERON:0002037	54.54	gold quality
cerebellar cortex	UBERON:0002129	54.53	gold quality
cerebellar hemisphere	UBERON:0002245	54.51	gold quality
blood	UBERON:0000178	54.27	gold quality
bone marrow	UBERON:0002371	54.15	gold quality
primary visual cortex	UBERON:0002436	53.57	gold quality
temporal lobe	UBERON:0001871	53.53	gold quality
amygdala	UBERON:0001876	53.37	gold quality
cerebral cortex	UBERON:0000956	53.28	gold quality
right hemisphere of cerebellum	UBERON:0014890	53.24	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	53.18	gold quality
muscle of leg	UBERON:0001383	52.85	gold quality
gastrocnemius	UBERON:0001388	52.31	gold quality
brain	UBERON:0000955	52.29	gold quality
nucleus accumbens	UBERON:0001882	52.27	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.