PLAC1

gene
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Also known as CT92OOSP2LOOSP2B

Summary

PLAC1 (placenta enriched 1, HGNC:9044) is a protein-coding gene on chromosome Xq26.3, encoding Placenta-specific protein 1 (Q9HBJ0). May play a role in placental development.

Involved in placenta development. Predicted to be located in extracellular region.

Source: NCBI Gene 10761 — RefSeq curated summary.

At a glance

  • GWAS associations: 4
  • Clinical variants (ClinVar): 30 total
  • MANE Select transcript: NM_021796

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:9044
Approved symbolPLAC1
Nameplacenta enriched 1
LocationXq26.3
Locus typegene with protein product
StatusApproved
AliasesCT92, OOSP2L, OOSP2B
Ensembl geneENSG00000170965
Ensembl biotypeprotein_coding
OMIM300296
Entrez10761

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 6 protein_coding, 3 protein_coding_CDS_not_defined

ENST00000359237, ENST00000466797, ENST00000473897, ENST00000476971, ENST00000878501, ENST00000917137, ENST00000917138, ENST00000917139, ENST00000950374

RefSeq mRNA: 4 — MANE Select: NM_021796 NM_001316887, NM_001316888, NM_001316889, NM_021796

CCDS: CCDS14642

Canonical transcript exons

ENST00000359237 — 3 exons

ExonStartEnd
ENSE00001153676134602051134602122
ENSE00001153689134658328134658471
ENSE00001424097134565838134566740

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 92.17.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.3357 / max 184.3673, expressed in 100 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter IDTPM avgSamples expressed
2005860.257968
2005850.051939
2005870.02598

Top tissues by expression

252 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
placentaUBERON:000198792.17gold quality
adrenal tissueUBERON:001830388.15gold quality
oocyteCL:000002386.91gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047385.67gold quality
secondary oocyteCL:000065579.94gold quality
cartilage tissueUBERON:000241870.67silver quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099165.80gold quality
stromal cell of endometriumCL:000225562.80gold quality
pancreatic ductal cellCL:000207961.86silver quality
deciduaUBERON:000245059.34gold quality
endothelial cellCL:000011555.78gold quality
hair follicleUBERON:000207355.71gold quality
ileal mucosaUBERON:000033154.49silver quality
deltoidUBERON:000147654.19gold quality
lower esophagus mucosaUBERON:003583454.17gold quality
cerebellar vermisUBERON:000472053.66gold quality
right testisUBERON:000453453.55gold quality
amniotic fluidUBERON:000017352.52gold quality
buccal mucosa cellCL:000233651.72gold quality
testisUBERON:000047351.72gold quality
epithelial cell of pancreasCL:000008351.52gold quality
quadriceps femorisUBERON:000137749.90gold quality
Brodmann (1909) area 46UBERON:000648349.30gold quality
cervix squamous epitheliumUBERON:000692249.20gold quality
left testisUBERON:000453349.15gold quality
metanephrosUBERON:000008149.02gold quality
olfactory bulbUBERON:000226448.92gold quality
myocardiumUBERON:000234948.87gold quality
type B pancreatic cellCL:000016948.83gold quality
cardiac muscle of right atriumUBERON:000337948.55gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-MTAB-6701yes57.29
E-ANND-3yes3.29

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): CEBPB, ESR1, NCOA1, NCOA2, NCOA3, NR1H3, SOX2, SP1, TP53

miRNA regulators (miRDB)

12 targeting PLAC1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-302E99.9670.742669
HSA-MIR-4760-3P99.9370.502385
HSA-MIR-6508-5P99.9270.672465
HSA-MIR-6809-3P99.9171.453814
HSA-MIR-4753-3P99.9071.033786
HSA-MIR-806799.8669.592260
HSA-MIR-130B-5P99.8368.501888
HSA-MIR-7154-5P99.6970.521900
HSA-MIR-46699.6770.852863
HSA-MIR-464399.4967.631791
HSA-MIR-806098.6166.931187
HSA-MIR-1178-3P98.5767.09890

Literature-anchored findings (GeneRIF, showing 40)

  • PLAC1, a trophoblast-specific gene, is Trophoblast-specific expression throughout gestation and responsiveness to KGF are consistent with a fundamental role for PLAC1 at the maternal-fetal interface. (PMID:12412044)
  • mRNA transcripts from placenta-expressed specific gene are detectable in maternal blood and rapidly disappear after delivery (PMID:15608456)
  • PLAC1 expression is upregulated during trophoblast differentiation, localizing primarily to the differentiated syncytiotrophoblast. (PMID:15803460)
  • Plasma PLAC1 and glial cells-missing 1 mRNAs appear promising as noninvasively measurable molecular markers for pre-eclampsia (PMID:16594548)
  • In induced term pregnancies, PLAC1 mRNA in maternal blood at the beginning of the treatment correlates with time elapsed before delivery; this demonstrates that fetomaternal trafficking of nucleic acids is more consistent when labor is about to begin. (PMID:16860456)
  • Data show that PLAC1 is restricted primarily to the differentiated trophoblast, localizing to intracellular membranous compartment(s) in the apical region of the syncytiotrophoblast and associated with its apical, microvillous membrane surface. (PMID:17186554)
  • CRH, PLAC1, and selectin-P are distributed differently in preeclampsia cases compared to controls and correlate with signs of preeclampsia. (PMID:17554801)
  • RNAi-mediated silencing of PLAC1 in MCF-7 and BT-549 breast cancer cells profoundly impairs motility, migration, and invasion and induces a G1-S cell cycle block with nearly complete abrogation of proliferation. (PMID:17909063)
  • study demonstrated that PLAC1 is a novel tumor antigen with very restricted normal tissue expression; also evidence provided that PLAC1 is expressed in the tumor cells in a subset of lung cancer patients (PMID:17983203)
  • 3.8% (4/101) of HCC patients had anti-PLAC1 antibody response, suggesting the immunogenicity of PLAC1 in HCC patients. PLAC1 represents a new class of tumor associated antigen with restricted expression in placenta and cancer tissues. (PMID:18183594)
  • analysis of activation of trophoblast-specific PLAC1 in breast cancer by CCAAT/enhancer-binding protein beta (C/EBPbeta) isoform 2 (PMID:19652226)
  • In normal tissues, PLAC1 expression was restricted to the placenta while developmental pluripotency associated-2 expression was restricted to the placenta and testis. (PMID:19705800)
  • A potential role for PLAC1 as a biomarker predictive of specific pregnancy complications, such as preeclampsia. (PMID:20509147)
  • The expression of PLAC1/CP1 genes correlates with various clinical and pathologic parameters in primary colorectal carcinoma. (PMID:21215095)
  • A novel HLA-A2-restricted cytotoxic T lymphocyte epitope from cancer-testis antigen PLAC1 has been identified in breast cancer. (PMID:21710262)
  • RXRalpha and LXR activate two promoters in placenta- and tumor-specific expression of PLAC1. (PMID:21937108)
  • we identified a novel specific antitrophoblast antibody, anti-PLAC1, in infertile women with repeated unexplained implantation failure. PLAC1 shows placenta-specific expression and is localized primarily in the syncytiotrophoblast. (PMID:23434395)
  • PLAC1/CP1 antigen is a possible prognostic marker of colorectal carcinoma, and PLAC1/CP1 p41-50 and PLAC1/CP1 p69-77 are novel HLA-A*0201-restricted CD8+ T cell epitopes (PMID:23604623)
  • NCOA3 is a selective co-activator of estrogen receptor alpha-mediated transactivation of PLAC1. (PMID:24304549)
  • This data suggests that the Epstein-Barr virus-induced PLAC1 is a member of the cancer/testis group of tumor antigens. (PMID:24912876)
  • Data suggests that PLAC1 plays an important role in human placental trophoblast invasion and migration. (PMID:24989904)
  • circulating mRNA improved detection rate of pre-eclampsia (PMID:25138310)
  • PLAC1/CP1 provides a marker for identifying gastric cancers with poor prognosis, and suggest that PLAC1/CP1 may provide a useful target for immunotherapy. (PMID:26157147)
  • PLAC1 was mainly expressed in the human villous syncytiotrophoblast (STB) layer throughout gestation, and the expression level of PLAC1 was significantly elevated during human trophoblast syncytialization. (PMID:27692364)
  • Plac1 plays a pivotal role in the progression of HCC, and may serve as a novel therapeutic target for Hepatocellular carcinoma. (PMID:27878289)
  • Optimized protocol for soluble prokaryotic expression, purification and structural analysis of human placenta specific-1(PLAC1). (PMID:28315746)
  • we show that PLAC1 transcript number is significantly negatively correlated with patient survival in our samples. Thus, we suggest that characterizing tumors for TP53 mutation status, p53 protein status and PLAC1 transcription could be used to predict likely prognosis and inform treatment options in patients diagnosed with serous ovarian cancer. (PMID:28339050)
  • this paper shows that PLAC1 immunization does not induce infertility in mice (PMID:28351180)
  • This study demonstrated that the protein expression of PLAC1 was significantly associated with decreased overall survival in patients with pancreatic ductal adenocarcinoma, indicating that it was a valuable prognostic marker for pancreatic ductal adenocarcinoma and might be a potential target for immunotherapy. (PMID:28618924)
  • Screening for these five CTAs and PLAC1 by RTqPCR may offer a potentially valuable prognostic tool with good sensitivity and specificity in patients with Hepatocellular carcinoma (HCC) that may be enhanced by magneticactivated cell sorting . (PMID:28849093)
  • Study revealed that PLAC1 expression was highly expressed in non-small cell lung cancer (NSCLC) tissues, suggesting that PLAC1 may be a prognostic factor and higher risk for NSCLC patients. PLAC1 was involved in regulation of the proliferation, migration, and invasion abilities of NSCLC cells partly through regulation of epithelial-mesenchymal transition and the AKT pathway. (PMID:29138842)
  • There was no significant correlation of serum PLAC1 levels with race, age at diagnosis, body mass index (BMI) or the presence of metastatic disease. It remains to be determined whether PLAC1 serum levels can serve as a diagnostic biomarker for the presence or recurrence of disease post-surgery and/or therapy (PMID:29432428)
  • The findings suggest a possible pathophysiological link between the development of Fetal growth restriction and the expression of PAPPA, PAPPA2 and PLAC-1. (PMID:29532882)
  • These findings suggest that functional interaction between Plac1 and Furin enhances breast cancer invasion and metastasis and the Furin/Notch1 intracellular domain (NICD) /PTEN axis may act as an important therapeutic target for breast cancer treatment. (PMID:29704427)
  • Placenta-specific protein 1 enhances liver metastatic potential and is associated with the PI3K/AKT/NF-kappaB signaling pathway in colorectal cancer. (PMID:32701605)
  • High expression of PLAC1 in colon cancer as a predictor of poor prognosis: A study based on TCGA data. (PMID:32827679)
  • Plac1 promotes nasopharyngeal carcinoma cells proliferation, migration and invasion via Furin/NICD/PTEN pathway. (PMID:33418237)
  • Expression of placenta-specific 1 and its potential for eliciting anti-tumor helper T-cell responses in head and neck squamous cell carcinoma. (PMID:33457076)
  • PLAC1 Regulates the Occurrence of Fetal Growth Restriction by Inhibiting the Apoptosis of Trophoblast Cells. (PMID:33941557)
  • Expression level of PLAC1 in osteosarcoma patients and its regulatory effect on the development of osteosarcoma. (PMID:34077010)

Cross-species orthologs

2 orthologs

OrganismSymbolGene ID
mus_musculusPlac1ENSMUSG00000061082
rattus_norvegicusPlac1ENSRNOG00000002379

Paralogs (2): OOSP2 (ENSG00000149507), OOSP1 (ENSG00000284873)

Protein

Protein identifiers

Placenta-specific protein 1Q9HBJ0 (reviewed: Q9HBJ0)

All UniProt accessions (1): Q9HBJ0

UniProt curated annotations — full annotation on UniProt →

Function. May play a role in placental development.

Subcellular location. Secreted.

Tissue specificity. Expressed in placenta. Localizes primarily to differentiated syncytiotrophoblast throughout gestation as well as to a small population of villous cytotrophoblasts. Also detected in maternal blood and rapidly disappears following delivery, but is not detected in other adult or fetal tissues examined.

Induction. Up-regulated during trophoblast differentiation and by FGF7 in trophoblast cells.

Similarity. Belongs to the PLAC1 family.

RefSeq proteins (4): NP_001303816, NP_001303817, NP_001303818, NP_068568* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR033222PLAC1_famFamily
IPR055356ZP-NDomain

Pfam: PF23344

UniProt features (2 total): signal peptide 1, chain 1

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q9HBJ0-F170.470.39

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 75 (showing top): GAANYNYGACNY_UNKNOWN, CAGCTG_AP4_Q5, EVI1_05, MARTINEZ_RB1_TARGETS_DN, GATA6_01, HEN1_01, GNF2_KISS1, GOBP_PLACENTA_DEVELOPMENT, GRYDER_PAX3FOXO1_ENHANCERS_IN_TADS, MARTINEZ_RB1_AND_TP53_TARGETS_UP, EVI1_03, GATA_Q6, SENESE_HDAC3_TARGETS_DN, TGGAAA_NFAT_Q4_01, AP1FJ_Q2

GO Biological Process (1): placenta development (GO:0001890)

GO Molecular Function (0):

GO Cellular Component (1): extracellular region (GO:0005576)

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
animal organ development1
cellular anatomical structure1

Protein interactions and networks

STRING

506 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
PLAC1ZP3P21754885
PLAC1HPRT1P00492718
PLAC1PAPPAQ13219520
PLAC1ZP1P60852491
PLAC1KISS1Q15726476
PLAC1GCM1Q9NP62473
PLAC1MID1O15344466
PLAC1PHF6Q8IWS0456
PLAC1ADAM12O43184449
PLAC1GPC3P51654448
PLAC1PAPPA2Q9BXP8439
PLAC1PRYO14603432
PLAC1CRHP06850429
PLAC1MTNAP1Q9BSJ5400
PLAC1INSL4Q14641374

IntAct

7 interactions, top by confidence:

ABTypeScore
PLAC1OBSL1psi-mi:“MI:0914”(association)0.350
ST14LIPT2psi-mi:“MI:0914”(association)0.350
GPIHBP1SAC3D1psi-mi:“MI:0914”(association)0.350
CGB5IGSF3psi-mi:“MI:0914”(association)0.350
SLC25A14PLOD3psi-mi:“MI:0914”(association)0.350

BioGRID (57): EP400 (Affinity Capture-MS), MEAF6 (Affinity Capture-MS), EPC2 (Affinity Capture-MS), TRRAP (Affinity Capture-MS), BRD8 (Affinity Capture-MS), VPS72 (Affinity Capture-MS), ING3 (Affinity Capture-MS), DMAP1 (Affinity Capture-MS), OBSL1 (Affinity Capture-MS), EPC1 (Affinity Capture-MS), TADA1 (Affinity Capture-MS), MBTD1 (Affinity Capture-MS), MRGBP (Affinity Capture-MS), KAT5 (Affinity Capture-MS), YEATS4 (Affinity Capture-MS)

ESM2 similar proteins: A0A0A6YXX9, A0A1Z2R986, A0A2R8Y4Y8, A0A2R8YFL7, A0A2R8YFM6, A0A8J1K1A4, A6MFL5, A6MFL6, A6MFL7, A6NHS7, A8MZH6, F8RKW5, G5E8D7, O54767, O77726, O88393, P17219, P20239, P26342, P34128, P35054, P42099, P47983, P47984, P70041, Q03167, Q05996, Q07G34, Q14CH0, Q1W7Q6, Q2Q0J1, Q3HXY1, Q3HXY2, Q3HXY3, Q3HXY4, Q3HXY5, Q3HXY6, Q3HXY8, Q3HXZ1, Q4FZG8

Diamond homologs: A0A2R8YFL7, Q2Q0J1, Q9HBJ0, A0A2R8Y4Y8, A0A2R8YFM6, A8MZH6, Q4FZG8, Q4V7E2, Q86WS3, Q9JI83

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

30 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance18
Likely benign2
Benign1

Top pathogenic / likely-pathogenic (0)

SpliceAI

643 predictions. Top by Δscore:

VariantEffectΔscore
X:134602046:CTAA:Cdonor_loss0.9900
X:134602047:TAA:Tdonor_loss0.9900
X:134602048:AAC:Adonor_loss0.9900
X:134602049:A:Tdonor_loss0.9900
X:134602050:CCTTC:Cdonor_loss0.9900
X:134602123:C:CCacceptor_gain0.9900
X:134643789:A:ACdonor_gain0.9900
X:134566741:C:CCacceptor_gain0.9800
X:134583781:T:Adonor_gain0.9800
X:134602043:AAACT:Adonor_loss0.9800
X:134602044:AACTA:Adonor_loss0.9800
X:134602045:ACT:Adonor_loss0.9800
X:134602120:CAG:Cacceptor_gain0.9800
X:134602120:CAGCT:Cacceptor_loss0.9800
X:134602122:GCT:Gacceptor_loss0.9800
X:134602123:CT:Cacceptor_loss0.9800
X:134602124:T:Gacceptor_loss0.9800
X:134643760:T:Adonor_gain0.9700
X:134643785:A:ACdonor_gain0.9700
X:134643786:C:CCdonor_gain0.9700
X:134643790:A:Cdonor_gain0.9700
X:134658323:CTTA:Cdonor_loss0.9700
X:134658324:TTACC:Tdonor_loss0.9700
X:134658325:TACCT:Tdonor_loss0.9700
X:134658326:A:Cdonor_loss0.9700
X:134658327:CCTG:Cdonor_gain0.9700
X:134658322:ACTT:Adonor_loss0.9600
X:134658326:ACCTG:Adonor_gain0.9600
X:134658327:CCTGC:Cdonor_gain0.9600
X:134566739:TT:Tacceptor_gain0.9500

AlphaMissense

1417 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
X:134566465:A:GF73S0.994
X:134566464:G:CF73L0.985
X:134566464:G:TF73L0.985
X:134566466:A:GF73L0.985
X:134566444:C:GC80S0.984
X:134566445:A:TC80S0.984
X:134566465:A:CF73C0.983
X:134566403:A:CY94D0.982
X:134566445:A:GC80R0.978
X:134566579:A:GF35S0.977
X:134566501:C:GC61S0.973
X:134566502:A:GC61R0.973
X:134566502:A:TC61S0.973
X:134566438:A:GI82T0.971
X:134566513:A:GL57S0.970
X:134566460:A:CY75D0.967
X:134566594:C:GC30S0.965
X:134566595:A:TC30S0.965
X:134566340:A:GC115R0.961
X:134566511:C:GG58R0.961
X:134566443:A:CC80W0.959
X:134566592:A:GS31P0.959
X:134566339:C:GC115S0.958
X:134566340:A:TC115S0.958
X:134566444:C:AC80F0.958
X:134566511:C:AG58C0.958
X:134566573:A:TV37D0.958
X:134566466:A:CF73V0.957
X:134566510:C:AG58V0.957
X:134566519:A:GL55P0.957

dbSNP variants (sampled 300 via entrez): RS1000002593 (X:134573673 G>A), RS1000071479 (X:134672344 C>A), RS1000082839 (X:134745196 C>A), RS1000084419 (X:134660352 C>T), RS1000086268 (X:134678702 G>T), RS1000090527 (X:134590009 C>T), RS1000122897 (X:134647751 T>C), RS1000150953 (X:134665673 C>T), RS1000154763 (X:134732544 C>A), RS1000160756 (X:134665184 A>G), RS1000164811 (X:134756944 A>G), RS1000182980 (X:134639831 C>T), RS1000192552 (X:134599173 A>G), RS1000216313 (X:134734097 C>T), RS1000217680 (X:134742575 G>A,T)

Disease associations

OMIM: gene MIM:300296 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

4 associations (top):

StudyTraitp-value
GCST007557_1Birth weight1.000000e-09
GCST008161_113Waist circumference adjusted for body mass index3.000000e-07
GCST008362_135Birth weight3.000000e-14
GCST90002383_124Hematocrit7.000000e-10

EFO canonical traits (3, from GWAS)

EFO IDTrait name
EFO:0004344birth weight
EFO:0007789BMI-adjusted waist circumference
EFO:0004348hematocrit

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

34 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects cotreatment, increases expression, affects expression7
bisphenol Aaffects expression, increases expression2
sodium arsenitedecreases expression, increases expression2
entinostatincreases expression, affects cotreatment2
Estradiolincreases expression, increases reaction2
Cadmium Chlorideincreases expression, decreases expression, increases abundance2
sotorasibaffects cotreatment, decreases expression1
propionaldehydeincreases expression1
titanium dioxideincreases expression1
trichostatin Aincreases expression1
butyraldehydeincreases expression1
aflatoxin B2increases methylation1
pentanalincreases expression1
2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-onedecreases reaction, increases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression1
dorsomorphinaffects cotreatment, increases expression1
bisphenol Sincreases methylation1
trametinibaffects cotreatment, decreases expression1
(+)-JQ1 compounddecreases expression1
NVP-BKM120affects cotreatment, decreases expression1
Wortmannindecreases reaction, increases expression1
Sunitinibdecreases expression1
Arsenic Trioxideincreases expression1
Vorinostatincreases expression1
Aldehydesincreases expression1
Cadmiumincreases abundance, increases expression1
Calcitriolincreases expression, affects cotreatment1
Testosteroneaffects cotreatment, increases expression, decreases expression1
Tetrachlorodibenzodioxindecreases expression1
Tretinoindecreases expression1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.