PLCE1-AS2

Summary

PLCE1-AS2 (PLCE1 antisense RNA 2, HGNC:51206) is a long non-coding RNA gene on chromosome 10q23.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51206
Approved symbol	PLCE1-AS2
Name	PLCE1 antisense RNA 2
Location	10q23.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232913
Ensembl biotype	lncRNA
Entrez	101927049
RNAcentral	URS000075B5EB — lncRNA, 1631 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 26 — 26 lncRNA

ENST00000419353, ENST00000432782, ENST00000433038, ENST00000438899, ENST00000453183, ENST00000594225, ENST00000595394, ENST00000596901, ENST00000599260, ENST00000601781, ENST00000613585, ENST00000618839, ENST00000620469, ENST00000650093, ENST00000728240, ENST00000728241, ENST00000728242, ENST00000728243, ENST00000728244, ENST00000728245, ENST00000728246, ENST00000728247, ENST00000728248, ENST00000728249, ENST00000728250, ENST00000728251

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419353 — 3 exons

Exon	Start	End
ENSE00001689161	94100496	94100693
ENSE00001699097	94107732	94107872
ENSE00001777828	94104338	94104457

Expression profiles

Bgee: expression breadth ubiquitous, 117 present calls, max score 87.83.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0129 / max 11.2771, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
110723	0.0129	3

Top tissues by expression

212 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.83	gold quality
right testis	UBERON:0004534	85.73	gold quality
left testis	UBERON:0004533	85.43	gold quality
colonic epithelium	UBERON:0000397	82.44	gold quality
testis	UBERON:0000473	81.66	gold quality
sural nerve	UBERON:0015488	75.45	gold quality
ventricular zone	UBERON:0003053	68.83	gold quality
bone marrow cell	CL:0002092	64.64	silver quality
endothelial cell	CL:0000115	62.06	gold quality
sperm	CL:0000019	58.82	gold quality
monocyte	CL:0000576	57.81	gold quality
skin of hip	UBERON:0001554	57.74	silver quality
calcaneal tendon	UBERON:0003701	57.16	gold quality
vena cava	UBERON:0004087	57.09	gold quality
upper leg skin	UBERON:0004262	57.08	silver quality
mucosa of paranasal sinus	UBERON:0005030	56.03	gold quality
adrenal tissue	UBERON:0018303	55.56	gold quality
lower lobe of lung	UBERON:0008949	54.86	gold quality
gall bladder	UBERON:0002110	54.68	gold quality
corpus callosum	UBERON:0002336	52.16	gold quality
tendon	UBERON:0000043	52.06	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	51.22	silver quality
tonsil	UBERON:0002372	50.62	silver quality
cardia of stomach	UBERON:0001162	50.21	gold quality
gastrocnemius	UBERON:0001388	49.77	gold quality
stomach	UBERON:0000945	49.46	gold quality
islet of Langerhans	UBERON:0000006	49.17	gold quality
oocyte	CL:0000023	48.89	gold quality
heart left ventricle	UBERON:0002084	48.72	silver quality
tibial artery	UBERON:0007610	48.52	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.86

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.