PLCH1-AS1

Summary

PLCH1-AS1 (PLCH1 antisense RNA 1, HGNC:41231) is a long non-coding RNA gene on chromosome 3q25.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41231
Approved symbol	PLCH1-AS1
Name	PLCH1 antisense RNA 1
Location	3q25.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000239508
Ensembl biotype	lncRNA
Entrez	100874035
RNAcentral	URS00005B3A67 — lncRNA, 1308 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000475196

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000475196 — 2 exons

Exon	Start	End
ENSE00001825519	155456688	155457753
ENSE00001871209	155449184	155449425

Expression profiles

Bgee: expression breadth broad, 32 present calls, max score 67.53.

Top tissues by expression

169 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	67.53	silver quality
ganglionic eminence	UBERON:0004023	58.66	silver quality
upper leg skin	UBERON:0004262	51.83	gold quality
prefrontal cortex	UBERON:0000451	46.89	silver quality
putamen	UBERON:0001874	46.53	gold quality
islet of Langerhans	UBERON:0000006	46.47	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	45.76	silver quality
gall bladder	UBERON:0002110	45.55	silver quality
gastrocnemius	UBERON:0001388	45.50	silver quality
caudate nucleus	UBERON:0001873	45.05	gold quality
skin of abdomen	UBERON:0001416	44.91	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
cortex of kidney	UBERON:0001225	43.02	gold quality
endometrium	UBERON:0001295	42.92	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
right atrium auricular region	UBERON:0006631	42.30	silver quality
uterus	UBERON:0000995	42.16	gold quality
blood	UBERON:0000178	42.04	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
adult mammalian kidney	UBERON:0000082	41.79	gold quality
left lobe of thyroid gland	UBERON:0001120	41.67	silver quality
kidney	UBERON:0002113	41.54	gold quality
cardiac atrium	UBERON:0002081	41.53	silver quality
forebrain	UBERON:0001890	41.49	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
brain	UBERON:0000955	41.37	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
cardiac ventricle	UBERON:0002082	41.15	gold quality
bone marrow	UBERON:0002371	41.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.