PLCH1-AS2

Summary

PLCH1-AS2 (PLCH1 antisense RNA 2, HGNC:41232) is a long non-coding RNA gene on chromosome 3q25.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41232
Approved symbol	PLCH1-AS2
Name	PLCH1 antisense RNA 2
Location	3q25.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000242925
Ensembl biotype	lncRNA
Entrez	100874036
RNAcentral	URS0000BC45A7 — lncRNA, 422 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000472913

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000472913 — 2 exons

Exon	Start	End
ENSE00004144967	155485691	155486049
ENSE00004144968	155486961	155487121

Expression profiles

Bgee: expression breadth broad, 85 present calls, max score 70.63.

Top tissues by expression

85 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	70.63	gold quality
testis	UBERON:0000473	69.72	gold quality
right testis	UBERON:0004534	68.51	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.79	gold quality
colonic epithelium	UBERON:0000397	63.77	silver quality
sural nerve	UBERON:0015488	61.59	silver quality
monocyte	CL:0000576	61.18	gold quality
liver	UBERON:0002107	61.18	gold quality
blood	UBERON:0000178	59.25	gold quality
stromal cell of endometrium	CL:0002255	58.30	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.99	gold quality
vermiform appendix	UBERON:0001154	57.47	gold quality
prefrontal cortex	UBERON:0000451	57.34	gold quality
right atrium auricular region	UBERON:0006631	57.02	gold quality
endometrium	UBERON:0001295	56.26	gold quality
islet of Langerhans	UBERON:0000006	55.72	gold quality
gastrocnemius	UBERON:0001388	54.40	gold quality
heart	UBERON:0000948	54.19	gold quality
right uterine tube	UBERON:0001302	52.88	gold quality
heart left ventricle	UBERON:0002084	51.90	gold quality
pancreas	UBERON:0001264	51.00	gold quality
multicellular organism	UBERON:0000468	50.35	gold quality
body of pancreas	UBERON:0001150	49.42	gold quality
calcaneal tendon	UBERON:0003701	49.31	silver quality
amygdala	UBERON:0001876	48.87	gold quality
right lung	UBERON:0002167	48.85	gold quality
tibial artery	UBERON:0007610	48.56	gold quality
body of stomach	UBERON:0001161	48.40	gold quality
stomach	UBERON:0000945	48.38	gold quality
hypothalamus	UBERON:0001898	47.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.92

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.