PLCXD2-AS1

Summary

PLCXD2-AS1 (PLCXD2 antisense RNA 1, HGNC:41145) is a long non-coding RNA gene on chromosome 3q13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41145
Approved symbol	PLCXD2-AS1
Name	PLCXD2 antisense RNA 1
Location	3q13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000240766
Ensembl biotype	lncRNA
Entrez	100874115
RNAcentral	URS000075C231 — lncRNA, 961 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000493131

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000493131 — 2 exons

Exon	Start	End
ENSE00001809360	111677343	111677433
ENSE00001916603	111676736	111677135

Expression profiles

Bgee: expression breadth broad, 89 present calls, max score 99.31.

Top tissues by expression

89 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	99.31	gold quality
right testis	UBERON:0004534	72.73	gold quality
testis	UBERON:0000473	70.43	gold quality
left testis	UBERON:0004533	70.33	gold quality
bone marrow cell	CL:0002092	69.38	silver quality
bone marrow	UBERON:0002371	64.91	gold quality
lymph node	UBERON:0000029	60.16	gold quality
islet of Langerhans	UBERON:0000006	57.77	gold quality
duodenum	UBERON:0002114	57.77	gold quality
prefrontal cortex	UBERON:0000451	57.00	gold quality
blood	UBERON:0000178	56.88	gold quality
calcaneal tendon	UBERON:0003701	56.33	gold quality
smooth muscle tissue	UBERON:0001135	55.32	gold quality
vermiform appendix	UBERON:0001154	54.92	gold quality
gall bladder	UBERON:0002110	53.14	gold quality
monocyte	CL:0000576	51.27	silver quality
urinary bladder	UBERON:0001255	51.17	gold quality
rectum	UBERON:0001052	50.82	gold quality
muscle of leg	UBERON:0001383	49.96	gold quality
multicellular organism	UBERON:0000468	49.33	gold quality
gastrocnemius	UBERON:0001388	48.57	gold quality
tonsil	UBERON:0002372	48.20	gold quality
mucosa of transverse colon	UBERON:0004991	48.15	gold quality
tibial artery	UBERON:0007610	47.65	gold quality
lung	UBERON:0002048	47.32	gold quality
liver	UBERON:0002107	46.79	silver quality
right lobe of liver	UBERON:0001114	46.44	silver quality
amygdala	UBERON:0001876	45.95	gold quality
endometrium	UBERON:0001295	45.75	silver quality
heart left ventricle	UBERON:0002084	45.63	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.44

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.