PLSCR5-AS1

Summary

PLSCR5-AS1 (PLSCR5 antisense RNA 1, HGNC:40907) is a long non-coding RNA gene on chromosome 3q24.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40907
Approved symbol	PLSCR5-AS1
Name	PLSCR5 antisense RNA 1
Location	3q24
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000241457
Ensembl biotype	lncRNA
Entrez	100874104
RNAcentral	URS00005B6290 — lncRNA, 450 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000473817

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000473817 — 2 exons

Exon	Start	End
ENSE00001858083	146589602	146589788
ENSE00001883239	146590063	146590325

Expression profiles

Bgee: expression breadth broad, 37 present calls, max score 87.19.

Top tissues by expression

37 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.19	gold quality
ventricular zone	UBERON:0003053	69.22	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	64.59	gold quality
liver	UBERON:0002107	64.16	silver quality
blood	UBERON:0000178	62.15	gold quality
endometrium	UBERON:0001295	56.66	gold quality
prefrontal cortex	UBERON:0000451	56.39	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	55.26	gold quality
monocyte	CL:0000576	52.09	gold quality
frontal cortex	UBERON:0001870	49.47	gold quality
putamen	UBERON:0001874	49.13	gold quality
gastrocnemius	UBERON:0001388	47.39	gold quality
body of pancreas	UBERON:0001150	46.09	gold quality
colon	UBERON:0001155	45.63	silver quality
esophagus mucosa	UBERON:0002469	43.86	silver quality
amygdala	UBERON:0001876	43.85	gold quality
transverse colon	UBERON:0001157	42.94	silver quality
nucleus accumbens	UBERON:0001882	42.88	silver quality
substantia nigra	UBERON:0002038	42.79	gold quality
lower esophagus muscularis layer	UBERON:0035833	42.28	silver quality
body of stomach	UBERON:0001161	42.25	silver quality
skin of abdomen	UBERON:0001416	42.09	gold quality
spleen	UBERON:0002106	41.89	silver quality
skin of leg	UBERON:0001511	41.19	silver quality
stomach	UBERON:0000945	39.60	silver quality
left lobe of thyroid gland	UBERON:0001120	39.02	silver quality
right testis	UBERON:0004534	38.93	gold quality
testis	UBERON:0000473	38.79	gold quality
thyroid gland	UBERON:0002046	38.77	silver quality
adult mammalian kidney	UBERON:0000082	38.35	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.