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POR

gene
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Also known as CYPORFLJ26468

Summary

POR (cytochrome p450 oxidoreductase, HGNC:9208) is a protein-coding gene on chromosome 7q11.23, encoding NADPH–cytochrome P450 reductase (P16435). This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes.

This gene encodes an endoplasmic reticulum membrane oxidoreductase that is essential for multiple metabolic processes, including reactions catalyzed by cytochrome P450 proteins for metabolism of steroid hormones, drugs and xenobiotics. The encoded protein has a flavin adenine dinucleotide (FAD)-binding domain and a flavodoxin-like domain which bind two cofactors, FAD and FMN, that allow it to donate electrons directly from NADPH to all microsomal P450 enzymes. Mutations in this gene cause a complex set of disorders, including apparent combined P450C17 and P450C21 deficiency, amenorrhea and disordered steroidogenesis, congenital adrenal hyperplasia and Antley-Bixler syndrome, that resemble those caused by defects in steroid metabolizing enzymes such as aromatase, 21-hydroxylase, and 17 alpha-hydroxylase.

Source: NCBI Gene 5447 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis (Definitive, ClinGen) — +1 more curated relationship
  • Clinical variants (ClinVar): 905 total — 59 pathogenic, 34 likely-pathogenic (top 3% of genes corpus-wide)
  • GTEx eGene: eQTL in 38 tissues, sQTL in 14 (q < 0.05)
  • ChEMBL bioactivity: 1 clinical-phase molecule tested; no curated mechanism-of-action drug
  • Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 0.89 (unconstrained)
  • MANE Select transcript: NM_001395413

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:9208
Approved symbolPOR
Namecytochrome p450 oxidoreductase
Location7q11.23
Locus typegene with protein product
StatusApproved
AliasesCYPOR, FLJ26468
Ensembl geneENSG00000127948
Ensembl biotypeprotein_coding
OMIM124015
Entrez5447

Gene structure

Transcript identifiers

Ensembl transcripts: 75 — 50 protein_coding, 19 nonsense_mediated_decay, 6 retained_intron

MANE Select: ENST00000461988

Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1, TSL 2: 6, TSL 3: 3, TSL 4: 9, TSL 5: 5

ENST00000461988, ENST00000394893, ENST00000412064, ENST00000412521, ENST00000414186, ENST00000418341, ENST00000421059, ENST00000426184, ENST00000432753, ENST00000439269, ENST00000439297, ENST00000439963, ENST00000447222, ENST00000448410, ENST00000449920, ENST00000453773, ENST00000454934, ENST00000460892, ENST00000471238, ENST00000475509, ENST00000487247, ENST00000493973, ENST00000495770, ENST00000496888, ENST00000706544, ENST00000706545, ENST00000706546, ENST00000706547, ENST00000910546, ENST00000910547, ENST00000910548, ENST00000910549, ENST00000910550, ENST00000910551, ENST00000910552, ENST00000910553, ENST00000910554, ENST00000910555, ENST00000910556, ENST00000910557, ENST00000910558, ENST00000910559, ENST00000910560, ENST00000910561, ENST00000910562, ENST00000910563, ENST00000910564, ENST00000933049, ENST00000933050, ENST00000944612, ENST00000944613, ENST00000944614, ENST00000944615, ENST00000944616, ENST00000997439, ENST00000997440, ENST00000997441, ENST00000997442, ENST00000997443, ENST00000997445, ENST00000997446, ENST00000997448, ENST00000997450, ENST00000997453, ENST00001027547, ENST00001027549, ENST00001076919, ENST00001076920, ENST00001076921, ENST00001076922, ENST00001076923, ENST00001076924, ENST00001076925, ENST00001116913, ENST00001116914

RefSeq mRNA: 7 — MANE Select: NM_001395413 NM_001367562, NM_001382655, NM_001382657, NM_001382658, NM_001382659, NM_001382662, NM_001395413

CCDS: CCDS5579

Canonical transcript exons

ENST00000461988 — 16 exons

ExonStartEnd
ENSE000034907467598477775984958
ENSE000035203967595398975954180
ENSE000035263987597241375972461
ENSE000035438517597945175979579
ENSE000035493897598222475982322
ENSE000035726577598104875981172
ENSE000035854697598352075983636
ENSE000035881297598615975986241
ENSE000036088717598505875985207
ENSE000036330247598592375986068
ENSE000036532777598151775981606
ENSE000036533537598557975985849
ENSE000036691217598373875983856
ENSE000037862427598033975980488
ENSE000039961257591515575915179
ENSE000039961277598633775986855

Expression profiles

Bgee: expression breadth ubiquitous, 266 present calls, max score 99.30.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 20.2134 / max 827.9743, expressed in 1807 samples.

Highest expression (Bgee): adrenal tissue, lobe of liver, adrenal gland, adrenal gland cortex, adrenal cortex.

Genetic regulation across tissues (GTEx eQTL / sQTL)

POR is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 38 tissues and its splicing (sQTL) in 14 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.

showing 20 of 52 significant tissue × QTL associations:

TissueQTLq-valueSlopeLead variant
Whole Bloodsqtl8.4e-57-0.917:75982438:C:T
Esophagus Gastroesophageal Junctioneqtl8.6e-22+0.427:75985459:G:A
Artery Aortaeqtl1.5e-21+0.437:75985459:G:A
Esophagus Musculariseqtl3.7e-20+0.387:75985459:G:A
Testiseqtl1.0e-18+0.317:75917574:G:A
Brain Cerebellar Hemisphereeqtl1.3e-16-0.877:75914929:C:A
Colon Sigmoideqtl3.4e-16+0.397:75985459:G:A
Cells Cultured fibroblastseqtl1.0e-15+0.267:75957679:T:A
Cells EBV-transformed lymphocyteseqtl1.6e-14+0.427:75917574:G:A
Nerve Tibialeqtl1.2e-13+0.247:75985459:G:A
Whole Bloodeqtl4.9e-13+0.117:75985459:G:A
Lungeqtl3.4e-12+0.257:76214206:T:C
Spleeneqtl2.7e-11+0.317:75985459:G:A
Thyroideqtl3.6e-11+0.187:75985459:G:A
Muscle Skeletaleqtl8.8e-11+0.157:75915137:A:C
Brain Cerebellumeqtl1.7e-10-0.827:75905645:A:G
Artery Tibialeqtl3.2e-10-0.367:75905645:A:G
Lungsqtl9.3e-09+0.377:75984680:C:T
Skin Sun Exposed Lower legeqtl2.2e-08+0.127:76079624:C:T
Heart Atrial Appendageeqtl2.9e-07+0.247:75985459:G:A

FANTOM5 promoters

3 alternative TSS:

Promoter IDTPM avgSamples expressed
7913313.94091759
791326.25521742
791370.01734

Top tissues by expression

showing 100 of 289 tissues by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
adrenal tissueUBERON:001830399.30gold quality
right lobe of liverUBERON:000111499.27gold quality
right adrenal glandUBERON:000123399.16gold quality
right adrenal gland cortexUBERON:003582799.13gold quality
left adrenal glandUBERON:000123499.08gold quality
left adrenal gland cortexUBERON:003582599.08gold quality
adrenal cortexUBERON:000123598.92gold quality
adrenal glandUBERON:000236998.87gold quality
right lobe of thyroid glandUBERON:000111998.67gold quality
left lobe of thyroid glandUBERON:000112098.47gold quality
adenohypophysisUBERON:000219698.46gold quality
olfactory segment of nasal mucosaUBERON:000538697.94gold quality
thyroid glandUBERON:000204697.92gold quality
metanephros cortexUBERON:001053397.75gold quality
pituitary glandUBERON:000000797.62gold quality
lower esophagus mucosaUBERON:003583497.58gold quality
right uterine tubeUBERON:000130297.53gold quality
liverUBERON:000210797.50gold quality
mucosa of transverse colonUBERON:000499197.28gold quality
right ovaryUBERON:000211897.22gold quality
upper lobe of left lungUBERON:000895297.07gold quality
left ovaryUBERON:000211996.72gold quality
right lungUBERON:000216796.61gold quality
small intestine Peyer’s patchUBERON:000345496.56gold quality
upper lobe of lungUBERON:000894896.44gold quality
left uterine tubeUBERON:000130396.11gold quality
ectocervixUBERON:001224996.02gold quality
islet of LangerhansUBERON:000000695.90gold quality
endocervixUBERON:000045895.85gold quality
omental fat padUBERON:001041495.85gold quality
small intestineUBERON:000210895.83gold quality
peritoneumUBERON:000235895.77gold quality
apex of heartUBERON:000209895.70gold quality
duodenumUBERON:000211495.53gold quality
skin of abdomenUBERON:000141695.45gold quality
esophagus mucosaUBERON:000246995.38gold quality
gall bladderUBERON:000211095.29gold quality
spleenUBERON:000210695.28gold quality
adipose tissue of abdominal regionUBERON:000780895.28gold quality
nasal cavity epitheliumUBERON:000538495.21gold quality
skin of legUBERON:000151194.97gold quality
transverse colonUBERON:000115794.80gold quality
body of stomachUBERON:000116194.63gold quality
right testisUBERON:000453494.51gold quality
left testisUBERON:000453394.48gold quality
right atrium auricular regionUBERON:000663194.33gold quality
tibial nerveUBERON:000132394.30gold quality
monocyteCL:000057694.20gold quality
ascending aortaUBERON:000149694.08gold quality
esophagusUBERON:000104394.06gold quality
jejunal mucosaUBERON:000039993.99gold quality
thoracic aortaUBERON:000151593.97gold quality
left coronary arteryUBERON:000162693.96gold quality
body of uterusUBERON:000985393.96gold quality
granulocyteCL:000009493.87gold quality
mononuclear cellCL:000084293.80gold quality
aortaUBERON:000094793.74gold quality
tibial arteryUBERON:000761093.70gold quality
popliteal arteryUBERON:000225093.69gold quality
hindlimb stylopod muscleUBERON:000425293.69gold quality
leukocyteCL:000073893.60gold quality
gastrocnemiusUBERON:000138893.51gold quality
heart left ventricleUBERON:000208493.45gold quality
minor salivary glandUBERON:000183093.44gold quality
descending thoracic aortaUBERON:000234593.44gold quality
right coronary arteryUBERON:000162593.42gold quality
coronary arteryUBERON:000162193.19gold quality
esophagogastric junction muscularis propriaUBERON:003584193.19gold quality
muscle layer of sigmoid colonUBERON:003580593.16gold quality
cortical plateUBERON:000534393.10gold quality
stromal cell of endometriumCL:000225592.93gold quality
cardiac ventricleUBERON:000208292.89gold quality
stomachUBERON:000094592.83gold quality
adult mammalian kidneyUBERON:000008292.75gold quality
subcutaneous adipose tissueUBERON:000219092.73gold quality
lower esophagusUBERON:001347392.65gold quality
lower esophagus muscularis layerUBERON:003583392.64gold quality
body of pancreasUBERON:000115092.61gold quality
mucosa of stomachUBERON:000119992.60gold quality
zone of skinUBERON:000001492.59gold quality
nucleus accumbensUBERON:000188292.54gold quality
pancreasUBERON:000126492.33gold quality
testisUBERON:000047392.28gold quality
cardiac atriumUBERON:000208192.22gold quality
right frontal lobeUBERON:000281092.21gold quality
seminal vesicleUBERON:000099892.20gold quality
mouth mucosaUBERON:000372992.08gold quality
adipose tissueUBERON:000101392.03gold quality
muscle of legUBERON:000138392.02gold quality
intestineUBERON:000016091.99gold quality
heartUBERON:000094891.94gold quality
ovaryUBERON:000099291.68gold quality
amygdalaUBERON:000187691.66gold quality
caudate nucleusUBERON:000187391.49gold quality
vaginaUBERON:000099691.42gold quality
colonUBERON:000115591.38gold quality
cingulate cortexUBERON:000302791.26gold quality
ganglionic eminenceUBERON:000402391.18gold quality
connective tissueUBERON:000238491.15gold quality
anterior cingulate cortexUBERON:000983591.14gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3no0.00

HPA expression

RNA tissue specificity: Tissue enhanced

showing 60 of 157 HPA tissues / cells by nTPM:

Tissue / cellAxisnTPMProtein (IHC)
Livertissue292.8high
Adrenal glandtissue130.5high
Thyroid glandtissue123.0high
Seminal vesicletissue106.6high
Duodenumtissue99.9high
Small intestinetissue87.0high
Parathyroid glandtissue72.7high
Pituitary glandtissue67.0
Tonguetissue64.8
Caudate putamentissue56.3
Locus coeruleustissue54.4
Frontal cortextissue52.3
Esophagustissue50.4medium
Adipose tissuetissue50.3medium
Nucleus accumbenstissue50.2
Lungtissue48.7high
Hippocampustissue48.1medium
Fallopian tubetissue46.9high
Placentatissue43.9high
Choroid plexustissue43.3
Pancreastissue42.2medium
Frontal cortextissue41.2
Postcentral gyrustissue40.7
Stomach 1tissue39.4high
Cervixtissue39.1high
Vaginatissue39.0medium
Ovarytissue38.4high
Caudate putamentissue37.8
Thymustissue35.3
Gallbladdertissue34.7high
Urinary bladdertissue34.5high
Colontissue33.8high
Skin 1tissue33.6high
Kidneytissue32.6high
Hypothalamustissue30.8
Appendixtissue30.5high
Spleentissue30.1medium
Cerebellumtissue28.4low
Epididymistissue28.0high
Thalamustissue27.3
Superior colliculitissue27.0
Spinal cordtissue26.7
Smooth muscletissue26.6not detected
Medulla oblongatatissue26.5
Ponstissue26.3
Midbraintissue26.1
Hippocampal formationtissue25.8
Prostatetissue25.4medium
Substantia nigratissue25.1
Periaqueductal graytissue24.8
Septumtissue24.0
Cerebral cortextissue23.9low
Somatosensory cortextissue23.9
Occipital cortextissue22.8
Heart muscletissue22.4not detected
Salivary glandtissue22.4medium
Adrenal glandtissue22.3medium
Testistissue22.0high
Tonsiltissue21.9high
Corpus callosumtissue21.6

Brain sub-regions (HPA Brain Atlas): detected in 382; highest nTPM — Ventromedial nucleus (80.9), Arcuate nucleus (72.6), Anterior thalamic nucleus, ventral (62.5), Median raphe nucleus (61.5), Dorsomedial nucleus (59.3).

Regulation

Is transcription factor: no

miRNA regulators (miRDB)

Targeting POR by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).

15 miRNAs:

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-428299.9975.366408
HSA-MIR-185-3P99.9567.011743
HSA-MIR-449299.8768.253611
HSA-MIR-6756-5P99.8267.972466
HSA-MIR-6766-5P99.6867.702325
HSA-MIR-6848-5P98.8165.491126
HSA-MIR-7114-5P98.5167.871349
HSA-MIR-5088-3P98.2966.631310
HSA-MIR-1212797.9366.67793
HSA-MIR-429497.8665.721110
HSA-MIR-66597.6065.641781
HSA-MIR-4640-5P97.4266.331543
HSA-MIR-4726-5P97.2465.671299
HSA-MIR-6895-5P97.0564.96522
HSA-MIR-134-3P96.8366.221001

Functional genomics

gnomAD constraint: pLI 8.98e-14, LOEUF 0.887, missense Z -0.355 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD

Regional missense constraint (gnomAD RMC): no regional variation along ENST00000461988 — one region, missense o/e 0.99.

Literature-anchored findings (GeneRIF, showing 40)

  • activation of HIF-1 is modulated by cytochrome P-450 reductase in cell membrane (PMID:11971899)
  • role of coenzyme binding in regulating interflavin electron transfer in human cytochrome P450 reductase (PMID:12787027)
  • Molecular pathogenesis of this form of congenital adrenal hyperplasia is caused by mutations in the gene encoding P450 oxidoreductase (PMID:15220035)
  • POR deficiency is a new disorder of adrenal and gonadal steroidogenesis that affects all microsomal cytochrome P450 enzymes, hence may have important implications for genetic differences in drug metabolism. (PMID:15666840)
  • POR deficiency is a new disease, distinct from the craniosynostosis syndromes caused by FGFR mutations. (PMID:16467261)
  • analysis of FAD binding in the Y459H and V492E Antley-Bixler syndrome mutants of human cytochrome P450 reductase (PMID:16998238)
  • Antticancer activity of motexafin gadolinium may involve inhibition of this enzyme. (PMID:17018578)
  • data suggest that African Americans harbor an allele at the POR locus that may increase breast cancer risk (PMID:17440066)
  • A287P homozygous patients had preferential inhibition of CYP17A1, whereas Steroid 21-Hydroxylase retained near normal activity. (PMID:17505056)
  • The energetics of 2’,5’-ADP binding to the FAD-binding domain of cytochrome P450 reductase were characterized. (PMID:17580970)
  • Mutations R457H and V492E located in the FAD domain of NADPH P450 oxidoreductase (POR) that disrupt electron transfer caused a complete loss of CYP19A1 activity. (PMID:17595315)
  • clinical, structural and functional implications of mutations and polymorphisms in POR (PMID:17635179)
  • TG100435 and TG100855 were interconverted metabolically. FMO3 seem to be the major N-oxidizing enzyme, whereas cytochrome P450 reductase seems to be responsible for the retroreduction reaction. (PMID:17881660)
  • The POR gene in a representative population of 842 healthy unrelated individuals in four ethnic groups was sequenced and compared. (PMID:18230729)
  • The prognosis for patients with POR deficiency appears to depend on the severity of the bony malformations and their timely treatment. (PMID:18259105)
  • The common P450 oxidoreductase variant A503V is not a modifier gene for 21-hydroxylase deficiency. (PMID:18397975)
  • POR deficiency can masquerade clinically as isolated 17,20-lyase deficiency. (PMID:18559916)
  • patients with Antley-Bixler-like skeletal anomalies, but with mutations in the POR gene and disordered steroidogenesis, represent a new disorder called POR deficiency. (PMID:18630181)
  • Experiments using excess NADPH over cytochrome P450 reductase provide evidence that both pH and solvent significantly influence the kinetic exposure of the blue di-semiquinone intermediate, yet the observed rate constants are essentially pH independent. (PMID:18681889)
  • CPR’s putative membrane topology indicates that the Q153R and R316W missense mutations found in patients with disordered steroidogenesis are located within the membrane-associated regions. (PMID:19161969)
  • Results describe a model of the structure of human P450 oxidoreductase created by in silico amino acid replacements in the rat POR crystal structure. (PMID:19744540)
  • Data support the formation of P450c17, P450arom, and CPR homodimers and oligomers in lipid bilayers. (PMID:19805543)
  • study describes 4 patients with POR deficiency & characterizes activities of their mutations; all were compound heterozygotes for POR mutations, including 5 novel mutations: L577R, N185K, delE217, and frameshift mutations 1363delC 7 697-698insGAAC (PMID:19837910)
  • Domain motion in cytochrome P450 reductase: conformational equilibria revealed by NMR and small-angle x-ray scattering. (PMID:19858215)
  • study concludes that compromised FMN binding is the specific molecular defect causing POR deficiency in patients with Y181D mutation and that this defect, in large part, can be overcome in vitro by FMN addition (PMID:19884324)
  • Results indicate that residues in the C-helix of cytochrome P450 2B6 play a major role in the interaction with NADPH-cytochrome P450 reductase. (PMID:20096935)
  • POR variants affect CYP3A4 activities. (PMID:20697309)
  • Report co-expression of recombinant human CYP2C9 with human cytochrome P450 reductase in protease deficient S. cerevisiae strain at a higher scale yields an enzyme of higher specific activity. (PMID:20722625)
  • mutations in POR found in patients with congenital adrenal hyperplasia may reduce HO-1 activity, potentially influencing heme catabolism in individuals carrying mutant POR alleles. (PMID:20732302)
  • Our results provide in vivo evidence for an important role of POR in regulating drug metabolism and detoxification. (PMID:20844025)
  • report mutations in POR in patients with disordered steroidogenesis/Antley-Bixler syndrome may reduce CYP3A4 activity; POR mutants Y181D, A457H, Y459H, V492E, R616X had over 99% loss of CYP3A4 activity; mutations A287P, C569Y, V608F lost 60-85% activity (PMID:20849814)
  • kinetic studies of catalytic interaction with CYP3A4 in liposomes; data support model in which 1st electron transfer takes place within relatively stable CPR-CYP3A4 complex then complex dissociates/reforms between 1st & 2nd electron transfers (PMID:20879989)
  • Cytochrome P450 oxidoreductase genetic variants have different effects on catalysis by CYP2D6 that depend on the substrate being metabolized. (PMID:20940534)
  • POR is probably an important contributor to genetic variation in both steroidogenesis and drug metabolism (PMID:21070833)
  • we identified 75 genetic variations in the POR gene including 26 novel ones from 235 Japanese subjects. Four novel variations resulted in amino acid substitutions. (PMID:21084761)
  • POR variants may also affect skeletal development and drug metabolism. (PMID:21164260)
  • investigation of influence of domain interfaces on various internal and external electron transfer rates, redox potentials of cofactors (FMN/FAD), and global geometry of the enzyme (PMID:21265736)
  • the human P450 (cytochrome) oxidoreductase gene transcription is regulated by thyroid hormone receptor beta and Smad3/4 (PMID:21393444)
  • Results reveal unusual biochemical differences between mosquito CPR and the human form in the binding of small molecules that may aid the development of ‘smart’ insecticides and synergists that selectively target mosquito CPR. (PMID:21655236)
  • this study provides novel insights into the regulation of gap junction function by CYPOR and suggests that Cx43 may play an important role(s) in CYPOR-mediated bone defects seen in patients. (PMID:21726529)

Cross-species orthologs

6 orthologs

OrganismSymbolGene ID
danio_rerioporaENSDARG00000055092
danio_rerioporbENSDARG00000059035
mus_musculusPorENSMUSG00000005514
rattus_norvegicusPorENSRNOG00000001442
drosophila_melanogasterCprFBGN0015623
caenorhabditis_elegansWBGENE00001262

Paralogs (5): NOS2 (ENSG00000007171), NOS1 (ENSG00000089250), MTRR (ENSG00000124275), NOS3 (ENSG00000164867), NDOR1 (ENSG00000188566)

Mouse-model phenotypes

Observed phenotypes of the mouse ortholog (MGI:97744) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 55 distinct phenotype terms.

Mouse phenotype (MP)Records
decreased circulating cholesterol level4
pale liver2
decreased body weight2
hepatic steatosis2
increased circulating testosterone level2
decreased heart weight2
decreased kidney weight2
abnormal enzyme/coenzyme activity2
abnormal xenobiotic pharmacokinetics2
absent trabeculae carneae1
short tail1
abnormal liver morphology1
enlarged liver1
exencephaly1
incomplete rostral neuropore closure1
hepatic necrosis1
abnormal embryo development1
pericardial edema1
intracranial hemorrhage1
reduced fertility1
reduced female fertility1
female infertility1
decreased litter size1
abnormal embryonic tissue morphology1
abnormal eye morphology1

+30 more (showing top 25).

Additional cross-species homologs

Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.

OrganismUniProtIdentityMethod
Yersinia pestis Pestoides FA4TPY5100.0%Diamond
Escherichia coli O139:H28 str. E24377AA7ZQK7100.0%Diamond
Escherichia coli ATCC 8739B1IU77100.0%Diamond
Yersinia pestis AntiquaQ1C3Z0100.0%Diamond
Yersinia pestis Nepal516Q1CLS8100.0%Diamond
Yersinia pestisQ8ZBN6100.0%Diamond
Escherichia coli K-12P3803899.8%Diamond
Shigella boydii Sb227Q31XM499.8%Diamond
Vibrio vulnificus YJ016Q7MHA599.8%Diamond
Vibrio vulnificus CMCP6Q8DCK299.8%Diamond
Vibrio cholerae O395A5F3I499.7%Diamond
Yersinia pseudotuberculosis IP 31758A7FLZ099.7%Diamond
Vibrio cholerae O1 biovar El Tor str. N16961Q9KUX499.7%Diamond
Yersinia pseudotuberculosis IP 32953Q66ED498.9%Diamond
Aspergillus niger CBS 513.88A2QS0598.8%Diamond
Aspergillus nigerQ0014198.8%Diamond
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7A9N2E698.5%Diamond
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2P3803998.5%Diamond
Shewanella sp. MR-4Q0HFL698.5%Diamond
Shewanella sp. MR-7Q0HYB498.5%Diamond
Shewanella sp. ANA-3A0KTH498.2%Diamond
Pongo abeliiQ5REF998.0%Diamond
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67Q57KH797.8%Diamond
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150Q5PEH797.8%Diamond
Salmonella enterica subsp. enterica serovar TyphiQ8Z45897.8%Diamond
Bos taurusQ2799597.0%Diamond
Capra hircusQ2831497.0%Diamond
Oryctolagus cuniculusO1911495.4%Diamond
Canis lupus familiarisQ9TUX893.5%Diamond
Sus scrofaP0417592.9%Diamond
Sorghum bicolorC5YJG892.8%Diamond
Oryza sativa Japonica GroupQ0J70592.8%Diamond
Cavia porcellusP3703992.0%Diamond
Ovis ariesQ2949891.9%Diamond
Aspergillus oryzae RIB40Q2UHA791.7%Diamond
Aspergillus terreus NIH2624Q0CMM091.2%Diamond
Aspergillus nidulans FGSC A4Q5BFT590.9%Diamond
Klebsiella pneumoniae subsp. pneumoniae MGH 78578A6TD4990.7%Diamond
Yersinia enterocolitica subsp. enterocolitica 8081A1JJS289.7%Diamond
Aspergillus fumigatus Af293Q4WM6789.1%Diamond

Genomic neighbors (locus context)

Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).

SymbolTypeEntrez
MIR4651ncRNA100616270
SNORA14AsnoRNA677801
TMEM120Aprotein-coding83862
RHBDD2protein-coding57414
STYXL1protein-coding51657
MDH2protein-coding4191
CCL24protein-coding6369

Protein

Protein identifiers

NADPH–cytochrome P450 reductase — P16435 (reviewed: P16435)

All UniProt accessions (19): P16435, A0A8V8NE24, A0A8V8NKH1, A0A8V8NLF0, A0A8V8NRY5, A0A8V8NVX2, A0A8V8NVY2, A0A8V8P1G2, A0A8V8P672, A0A8V8PBF2, A0A9L9PXL8, A0A9L9PXN4, A0A9L9PY49, C9JDE2, C9JQ78, C9JU80, E7EMD0, E7EWU0, H0Y4R2

UniProt curated annotations — full annotation on UniProt →

Function. This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5.

Subcellular location. Endoplasmic reticulum membrane.

Disease relevance. Antley-Bixler syndrome, with genital anomalies and disordered steroidogenesis (ABS1) [MIM:201750] A disease characterized by the association of Antley-Bixler syndrome with steroidogenesis defects and abnormal genitalia. Antley-Bixler syndrome is characterized by craniosynostosis, radiohumeral synostosis present from the perinatal period, midface hypoplasia, choanal stenosis or atresia, femoral bowing and multiple joint contractures. The disease is caused by variants affecting the gene represented in this entry. Disordered steroidogenesis due to cytochrome P450 oxidoreductase deficiency (DISPORD) [MIM:613571] A disorder resulting in a rare variant of congenital adrenal hyperplasia, with apparent combined P450C17 and P450C21 deficiency and accumulation of steroid metabolites. Affected girls are born with ambiguous genitalia, but their circulating androgens are low and virilization does not progress. Conversely, affected boys are sometimes born undermasculinized. Boys and girls can present with bone malformations, in some cases resembling the pattern seen in patients with Antley-Bixler syndrome. The disease is caused by variants affecting the gene represented in this entry.

Cofactor. Binds 1 FAD per monomer. Binds 1 FMN per monomer.

Similarity. Belongs to the NADPH–cytochrome P450 reductase family. In the N-terminal section; belongs to the flavodoxin family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.

RefSeq proteins (7): NP_001354491, NP_001369584, NP_001369586, NP_001369587, NP_001369588, NP_001369591, NP_001382342* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR001094Flavdoxin-likeDomain
IPR001433OxRdtase_FAD/NAD-bdDomain
IPR001709Flavoprot_Pyr_Nucl_cyt_RdtaseDomain
IPR003097CysJ-like_FAD-bindingDomain
IPR008254Flavodoxin/NO_synthDomain
IPR017927FAD-bd_FR_typeDomain
IPR017938Riboflavin_synthase-like_b-brlHomologous_superfamily
IPR023173NADPH_Cyt_P450_Rdtase_alphaHomologous_superfamily
IPR023208P450RFamily
IPR029039Flavoprotein-like_sfHomologous_superfamily
IPR039261FNR_nucleotide-bdHomologous_superfamily

Pfam: PF00175, PF00258, PF00667

Enzyme classification (BRENDA)

  • EC 1.6.2.4 — NADPH-hemoprotein reductase (BRENDA: 126 organisms, 159 substrates, 73 inhibitors, 211 Km, 121 kcat entries)

Substrate kinetics (BRENDA)

17 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
NADPH—79
FERRICYTOCHROME C0.0009–0.092448
CYTOCHROME C—32
OXIDIZED 3-(4,5-DIMETHYLTHIAZOL-2-YL)-2,5-DIPHEN0.0018–0.01115
NADH0.0084–5011
FERRICYANIDE0.0072–0.11933
4-NITROACETOPHENONE1.42
OXIDIZED 2,6-DICHLOROPHENOLINDOPHENOL0.055–0.0772
4-NITROBENZALDEHYDE0.311
5-CYANO-2,3-DITOLYL TETRAZOLIUM CHLORIDE0.051
AZIDONITROPHENYL-GAMMA-AMINOBUTYRYL-NADPH0.00191
BENZALACETONE2.51
ETHANOL7.21
HEXADECANAL0.031
MENADIONE0.00531

Catalyzed reactions (Rhea)

  • 2 oxidized [cytochrome P450] + NADPH = 2 reduced [cytochrome P450] + NADP(+) + H(+) (RHEA:24040)

UniProt features (106 total): helix 31, strand 30, binding site 15, sequence variant 12, turn 6, sequence conflict 3, topological domain 2, modified residue 2, domain 2, initiator methionine 1, chain 1, transmembrane region 1

Structure

Experimental structures (PDB)

14 structures by resolution:

PDBTitleMethodResolution (Å)
9EB1CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT …X-RAY DIFFRACTION1.1
9EB0CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT …X-RAY DIFFRACTION1.13
9EAZCRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT …X-RAY DIFFRACTION1.17
9EAXCRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT …X-RAY DIFFRACTION1.35
3QFSCrystal Structure of NADPH-Cytochrome P450 Reductase (FAD/NADPH domain)X-RAY DIFFRACTION1.4
3QFTCrystal Structure of NADPH-Cytochrome P450 Reductase (FAD/NADPH domain and R457H Mutant)X-RAY DIFFRACTION1.4
9EAYCRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT …X-RAY DIFFRACTION1.5
3QE2Crystal Structure of Human NADPH-Cytochrome P450 ReductaseX-RAY DIFFRACTION1.75
3QFCCrystal Structure of Human NADPH-Cytochrome P450 (V492E mutant)X-RAY DIFFRACTION1.8
1B1CCRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE AT 1.93A …X-RAY DIFFRACTION1.93
5EMNCrystal Structure of Human NADPH-Cytochrome P450 Reductase(A287P mutant)X-RAY DIFFRACTION2.2
5FA6wild type human CYPORX-RAY DIFFRACTION2.3
3QFRCrystal Structure of Human NADPH-Cytochrome P450 Reductase (R457H Mutant)X-RAY DIFFRACTION2.4
3FJOStructure of chimeric YH CPRX-RAY DIFFRACTION2.5

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P16435-F191.290.81

Human Protein Atlas

Protein class: Enzymes, ENZYME proteins, Transferases, Metabolic proteins, Transporters, Electrochemical Potential-driven transporters, Predicted membrane proteins, Disease related genes, Potential drug targets, Human disease related genes, Congenital malformations, Congenital malformations of skin

Protein evidence: Evidence at protein level

Subcellular location (HPA, imaging): vesicles

Antibody reliability (HPA): IH enhanced · IF approved

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Ligand- & substrate-binding residues (15)

PositionRole
208FMN
298NADP(+)
424FAD
454–457FAD
472–474FAD
478FAD
488–491FAD
535NADP(+)
596–597NADP(+)
602–606NADP(+)
638NADP(+)
676FAD
86–91FMN
138–141FMN
173–182FMN

Post-translational modifications (2)

TypePositions
N-acetylglycine2
Phosphoserine63

Function

Pathways and Gene Ontology

Reactome pathways

1 curated (TAS) of 4; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).

4 pathways:

IDPathwayEvidence
R-HSA-211897Cytochrome P450 - arranged by substrate typecurated
R-HSA-211859Biological oxidations—
R-HSA-1430728Metabolism—
R-HSA-211945Phase I - Functionalization of compounds—

MSigDB gene sets: 0 (showing top):

GO Biological Process (21): nitric oxide biosynthetic process (GO:0006809), response to nutrient (GO:0007584), response to xenobiotic stimulus (GO:0009410), carnitine metabolic process (GO:0009437), response to hormone (GO:0009725), fatty acid oxidation (GO:0019395), electron transport chain (GO:0022900), positive regulation of chondrocyte differentiation (GO:0032332), negative regulation of apoptotic process (GO:0043066), nitrate catabolic process (GO:0043602), positive regulation of smoothened signaling pathway (GO:0045880), nitric oxide catabolic process (GO:0046210), positive regulation of growth plate cartilage chondrocyte proliferation (GO:0061913), demethylation (GO:0070988), cellular response to follicle-stimulating hormone stimulus (GO:0071372), cellular response to peptide hormone stimulus (GO:0071375), response to dexamethasone (GO:0071548), positive regulation of steroid hormone biosynthetic process (GO:0090031), organofluorine metabolic process (GO:0090346), P450-containing electron transport chain (GO:0140647), cellular response to gonadotropin stimulus (GO:0071371)

GO Molecular Function (13): NADPH-hemoprotein reductase activity (GO:0003958), cytochrome-b5 reductase activity, acting on NAD(P)H (GO:0004128), enzyme activator activity (GO:0008047), nitric oxide dioxygenase [NAD(P)H] activity (GO:0008941), electron transfer activity (GO:0009055), FMN binding (GO:0010181), hydrolase activity (GO:0016787), enzyme binding (GO:0019899), iron-cytochrome-c reductase activity (GO:0047726), flavin adenine dinucleotide binding (GO:0050660), NADP binding (GO:0050661), protein binding (GO:0005515), oxidoreductase activity (GO:0016491)

GO Cellular Component (6): nucleoplasm (GO:0005654), endoplasmic reticulum membrane (GO:0005789), cytosol (GO:0005829), membrane (GO:0016020), intracellular membrane-bounded organelle (GO:0043231), cytoplasm (GO:0005737)

Reactome top-level categories

3 top-level categories:

CategoryPathways
Phase I - Functionalization of compounds1
Metabolism1
Biological oxidations1

GO top-level categories

60 GO namespaces:

CategoryTerms
cellular anatomical structure4
response to chemical3
catalytic activity3
nitric oxide metabolic process2
catabolic process2
oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor2
anion binding2
intracellular anatomical structure2
biosynthetic process1
response to nutrient levels1
amino-acid betaine metabolic process1
response to endogenous stimulus1
fatty acid metabolic process1
lipid oxidation1
generation of precursor metabolites and energy1
chondrocyte differentiation1
regulation of chondrocyte differentiation1
positive regulation of cell differentiation1
positive regulation of cartilage development1
apoptotic process1
regulation of apoptotic process1
negative regulation of programmed cell death1
nitrate metabolic process1
smoothened signaling pathway1
regulation of smoothened signaling pathway1
positive regulation of signal transduction1
growth plate cartilage chondrocyte proliferation1
regulation of growth plate cartilage chondrocyte proliferation1
positive regulation of cell population proliferation1
metabolic process1
response to follicle-stimulating hormone1
cellular response to gonadotropin stimulus1
cellular response to hormone stimulus1
response to peptide hormone1
cellular response to nitrogen compound1
cellular response to oxygen-containing compound1
response to glucocorticoid1
response to ketone1
positive regulation of steroid biosynthetic process1
positive regulation of hormone biosynthetic process1
regulation of steroid hormone biosynthetic process1
organohalogen metabolic process1
electron transport chain1
enzyme regulator activity1
molecular function activator activity1
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor1
molecular_function1
ribonucleotide binding1
protein binding1
oxidoreductase activity, acting on metal ions1
nucleotide binding1
adenyl nucleotide binding1
binding1
nuclear lumen1
organelle membrane1
nuclear outer membrane-endoplasmic reticulum membrane network1
endoplasmic reticulum subcompartment1
cytoplasm1
membrane-bounded organelle1
intracellular organelle1

Experimentally-supported GO annotations

GO terms backed by direct experimental evidence (ECO experimental codes) — 8 of 40 annotations. The rest are phylogenetic / computational / electronic (IEA).

8 experimentally-supported GO terms:

GO termNSEvidence
electron transport chainBPdirect assay
organofluorine metabolic processBPdirect assay
cytosolCCdirect assay
intracellular membrane-bounded organelleCCdirect assay
membraneCChigh-throughput assay
nucleoplasmCCdirect assay
NADPH-hemoprotein reductase activityMFdirect assay
enzyme activator activityMFdirect assay

Protein interactions and networks

STRING

showing 15 of 1,409 interactions by confidence (×1000):

Protein AProtein BPartner UniProtScore
PORCYP51A1Q16850915
PORCYB5AP00167850
PORCYB5BO43169849
PORCYP17A1P05093842
PORCYP21A2P04033726
PORPPIGQ13427715
PORCYB5R1Q9UHQ9670
PORCYP2B6P20813664
PORCYP3A4P05184649
PORCYB5R3P00387614
PORCYB5RLQ6IPT4613
PORCYP1A2P05177607
PORFGFR2P18443597
PORHSD3B2P26439594
PORCYCSP00001584

IntAct

Human interaction partners of POR in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).

9 partners by confidence:

PartnerInteraction typeMIscoreRecords
PGRMC1physical association0.6804
SNX8association0.6403
CYP2C2physical association0.5803
CYCSdirect interaction0.4401
RABEPKphysical association0.3701
STAT1physical association0.3701
UBXN6association0.3502
MATN1association0.3501
XRCC6physical association0.0001

BioGRID (346 interactions; top human partners by supporting records): CYP2E1 (PCA; 4 records), UBXN6 (Affinity Capture-MS; 4 records), CYP1A2 (Reconstituted Complex; 3 records), CYP2C9 (Proximity Label-MS; 3 records), EMC4 (Co-fractionation; 3 records), FANCC (Affinity Capture-Western; 3 records), PGRMC1 (Affinity Capture-MS; 3 records), SEC61B (Proximity Label-MS; 3 records), BCAP31 (Proximity Label-MS; 2 records), CANX (Co-fractionation; 2 records), CYP2A6 (Reconstituted Complex; 2 records), CYP2C19 (Reconstituted Complex; 2 records), CYP2D6 (Reconstituted Complex; 2 records), CYP3A4 (Reconstituted Complex; 2 records), DERL1 (Affinity Capture-MS; 2 records)

SIGNOR signaling

1 signaling interactions:

AEffectBMechanism
SP1“up-regulates quantity by expression”POR“transcriptional regulation”

Disease & clinical

Genetic variants

Variant evidence for POR: 905 ClinVar records (93 pathogenic / likely pathogenic). Per-variant detail is on Sugi Variant.

ClinVar

905 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic59
Likely pathogenic34
Uncertain significance242
Likely benign430
Benign31

Top pathogenic / likely-pathogenic (15)

Showing the 15 best-reviewed of 93 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.

Variant IDHGVSClassificationReviewSubmitters
16915NM_001395413.1(POR):c.1606G>A (p.Gly536Arg)Pathogeniccriteria provided, multiple submitters, no conflicts7
1405328NM_001395413.1(POR):c.723-2A>TPathogeniccriteria provided, multiple submitters, no conflicts5
580516NM_001395413.1(POR):c.1562_1610dup (p.Ala538fs)Pathogeniccriteria provided, multiple submitters, no conflicts2
691923NM_001395413.1(POR):c.1434C>A (p.Tyr478Ter)Pathogeniccriteria provided, multiple submitters, no conflicts2
2735033NM_001395413.1(POR):c.658C>T (p.Arg220Ter)Pathogeniccriteria provided, multiple submitters, no conflicts2
2919493NM_001395413.1(POR):c.735C>G (p.Tyr245Ter)Pathogeniccriteria provided, multiple submitters, no conflicts2
3594771NM_001395413.1(POR):c.1718dup (p.Tyr573Ter)Pathogeniccriteria provided, multiple submitters, no conflicts2
16903NM_001395413.1(POR):c.1697G>A (p.Cys566Tyr)Likely pathogeniccriteria provided, multiple submitters, no conflicts3
3339945NM_001395413.1(POR):c.1685T>C (p.Leu562Pro)Likely pathogeniccriteria provided, multiple submitters, no conflicts3
576622NM_001395413.1(POR):c.179+2T>CLikely pathogeniccriteria provided, multiple submitters, no conflicts2
2822770NM_001395413.1(POR):c.1240-2A>GLikely pathogeniccriteria provided, multiple submitters, no conflicts2
1684295NM_001395413.1(POR):c.1166dup (p.Ala390fs)Pathogeniccriteria provided, single submitter1
2065334NM_001395413.1(POR):c.1795C>T (p.Gln599Ter)Pathogeniccriteria provided, single submitter1
2695460NM_001395413.1(POR):c.697del (p.Val233fs)Pathogeniccriteria provided, single submitter1
2707022NM_001395413.1(POR):c.1631_1634del (p.Ile544fs)Pathogeniccriteria provided, single submitter1

Per-variant reference — Sugi Variant

Explore POR’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.

HPA cancer prognostics

RNA cancer specificity: Low cancer specificity

Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.

3 prognostic cancer types:

CancerPrognosticp-value
Kidney Renal Clear Cell Carcinoma (TCGA)favorable3.95e-06
Liver Hepatocellular Carcinoma (TCGA)unfavorable3.08e-05
Thyroid Carcinoma (TCGA)unfavorable0.000754

Disease associations

OMIM: gene MIM:124015 | disease phenotypes: MIM:201750, MIM:613571, MIM:207410, MIM:601353

GenCC curated gene-disease

2 curated gene-disease records:

DiseaseClassificationInheritanceRecords
Antley-Bixler syndrome with genital anomalies and disordered steroidogenesisDefinitiveAutosomal recessive3
congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiencyStrongAutosomal recessive3

ClinGen Gene-Disease Validity

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

1 validity classifications:

DiseaseClassificationInheritance
Antley-Bixler syndrome with genital anomalies and disordered steroidogenesisDefinitiveAR

Genomics England panels (PanelApp)

Clinical diagnostic gene panels including this gene (11 panels, 11 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.

11 panels:

PanelRating
Arthrogryposisgreen
Differences in sex developmentgreen
Fetal anomaliesgreen
Hypotonic infantgreen
Leukodystrophy, childhood onsetgreen
Likely inborn error of metabolismgreen
Paediatric disordersgreen
Rare syndromic craniosynostosis or isolated multisuture synostosisgreen
Skeletal dysplasiagreen
Undiagnosed metabolic disordersgreen
Unexplained death in infancy and sudden unexplained death in childhoodgreen

Mondo (5): Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis (MONDO:0008726), congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency (MONDO:0013310), congenital adrenal hyperplasia (MONDO:0018479), Antley-Bixler syndrome without genital anomalies or disordered steroidogenesis (MONDO:0020667), Fine-Lubinsky syndrome (MONDO:0011049)

Orphanet (6): Congenital adrenal hyperplasia (Orphanet:418), Antley-Bixler syndrome without genital anomaly or disorder of steroidogenesis (Orphanet:596008), Antley-Bixler syndrome with genital anomaly and disorder of steroidogenesis (Orphanet:63269), Antley-Bixler syndrome (Orphanet:83), Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency (Orphanet:95699), Aymé-Gripp syndrome (Orphanet:1272)

MeSH disease descriptors

2 disease descriptors:

DescriptorNameTree numbers
D000312Adrenal Hyperplasia, CongenitalC12.050.351.875.253.090.500; C12.200.706.316.090.500; C12.800.316.090.500; C16.131.939.316.129.500; C16.320.033; C16.320.565.925.249; C18.452.648.925.249; C19.053.440; C19.391.119.090.500
C537933Fine-Lubinsky syndrome *(supp.)*

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2169731 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 606 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

1 molecules by phase:

MoleculeNamePhasePatents
CHEMBL15192LAPACHONE2606

PharmGKB: 1 entry (CPIC guideline: no)

Binding affinities (BindingDB)

12 measured of 12 human assays (12 total across all organisms); most potent 12 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValue
CHEMBL5653589KD1440 nM
R115 (Reactive Blue 2)IC502100 nM
CHEMBL4102425IC502400 nM
CHEMBL4074173IC502900 nM
CHEMBL4086536IC503100 nM
CHEMBL4065098IC503100 nM
CHEMBL4094677IC504100 nM
CHEMBL3398293IC505800 nM
CHEMBL4080037IC508500 nM
CHEMBL4098063IC5011000 nM
CHEMBL3398294IC5011000 nM
CHEMBL3398292IC5012000 nM

ChEMBL bioactivities

2 potent at pChembl≥5 of 13 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
5.20IC506300nMCHEMBL4094677
5.05IC509000nMCHEMBL4086536

PubChem BioAssay actives

2 with measured affinity, of 114 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
3,8-dimethylbenzo[g][1]benzofuran-4,5-dione1441532: Substrate activity at CPR in human L02 cells assessed as CPR-mediated one-electron reduction of compound by measuring cell growth inhibition treated for 24 hrs measured after 72 hrs by MTT assayic506.3000uM
7,8-dimethylbenzo[g][1]benzofuran-4,5-dione1441532: Substrate activity at CPR in human L02 cells assessed as CPR-mediated one-electron reduction of compound by measuring cell growth inhibition treated for 24 hrs measured after 72 hrs by MTT assayic509.0000uM

CTD chemical–gene interactions

165 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
bisphenol Aaffects expression, affects binding, increases reaction, decreases expression, decreases methylation (+1 more)7
perfluorooctanoic acidaffects cotreatment, increases expression5
perfluorooctane sulfonic acidaffects expression, affects cotreatment, increases expression5
NADPaffects cotreatment, increases oxidation, affects reaction, increases activity, increases chemical synthesis (+4 more)5
Aflatoxin B1affects expression, decreases expression, increases methylation, affects cotreatment, increases response to substance5
Benzo(a)pyreneincreases mutagenesis, increases response to substance, decreases expression, decreases methylation, affects cotreatment4
Hydrogen Peroxideincreases abundance, increases metabolic processing, affects cotreatment, increases chemical synthesis, increases reaction (+1 more)4
Paraquatincreases chemical synthesis, increases response to substance, decreases reaction, increases abundance, increases metabolic processing (+3 more)4
Phenobarbitalaffects expression, increases expression4
Cadmium Chlorideincreases activity, increases expression, decreases reaction4
diphenyleneiodoniumincreases activity, increases abundance, increases metabolic processing, decreases activity, decreases reaction3
sodium arsenitedecreases expression, increases expression3
perfluoro-n-nonanoic acidaffects cotreatment, increases expression3
Doxorubicindecreases expression, decreases response to substance, affects metabolic processing, increases activity3
Quercetindecreases activity, increases activity, affects cotreatment, decreases reaction, increases metabolic processing3
Tretinoinincreases expression3
aristolochic acid Iincreases expression, increases metabolic processing2
dibutylnitrosamineaffects cotreatment, increases response to substance2
N-nitroso(di-n-propyl)amineaffects cotreatment, increases response to substance2
sulforaphaneaffects cotreatment, increases expression2
2-amino-3-methylimidazo(4,5-f)quinolineaffects cotreatment, increases response to substance2
2-amino-3,4-dimethylimidazo(4,5-f)quinolineaffects cotreatment, increases response to substance2
2-amino-3,8-dimethylimidazo(4,5-f)quinoxalineaffects cotreatment, increases response to substance2
2-amino-1-methyl-6-phenylimidazo(4,5-b)pyridineaffects cotreatment, increases response to substance2
2,5-diaziridinyl-3-(hydroxymethyl)-6-methyl-1,4-benzoquinoneincreases reduction, increases activity2
perfluorohexanesulfonic acidincreases expression, affects cotreatment2
perfluorohexanoic acidincreases expression2
Troglitazoneincreases expression2
Air Pollutantsincreases oxidation, increases expression, affects cotreatment, increases abundance2
Cyclophosphamideincreases response to substance, increases reaction2

ChEMBL screening assays

21 unique, capped per target: 14 admet, 7 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL2175347BindingActivity of human recombinant cytochrome P450 reductase assessed as rate of superoxide generation measuring SOD-inhibitable reduction of succinoylated cytochrome c per 2 mU enzyme at 100 umol/ml by spectrophotometry in presence of catalaseSynthesis and structure-activity relationships of lapacho analogues. 1. Suppression of human keratinocyte hyperproliferation by 2-substituted naphtho[2,3-b]furan-4,9-diones, activation by enzymatic one- and two-electron reduction, and intracellular generation of superoxide. — *J Med Chem*
CHEMBL4009115ADMETSubstrate activity at CPR in human L02 cells assessed as CPR-mediated one-electron reduction of compound by measuring ROS production at 10 uM after 1 to 3 hrs by DCFH-DA staining based flow cytometryDiscovery of quinone-directed antitumor agents selectively bioactivated by NQO1 over CPR with improved safety profile. — *Eur J Med Chem*

Cellosaurus cell lines

22 cell lines: 10 spontaneously immortalized cell line, 7 cancer cell line, 4 induced pluripotent stem cell, 1 transformed cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_A4XZWMUi018-AInduced pluripotent stem cellFemale
CVCL_A9XCBGUi001-AInduced pluripotent stem cellMale
CVCL_A9XDBGUi002-AInduced pluripotent stem cellMale
CVCL_A9XEBGUi003-AInduced pluripotent stem cellMale
CVCL_B1E1Abcam HCT 116 POR KOCancer cell lineMale
CVCL_B2BKAbcam HeLa POR KOCancer cell lineFemale
CVCL_B5WPV79MZh1B1Spontaneously immortalized cell lineMale
CVCL_B6ARHepaRG POR KOCancer cell lineFemale
CVCL_C0R0HepaRG-POR#1Cancer cell lineFemale
CVCL_C0R1HepaRG-POR#2Cancer cell lineFemale

Clinical trials (associated diseases)

Via MONDO — disease-level, not drug-specific.

showing 60 of 215 trials:

NCTPhaseStatusTitle
NCT03760835Phase 4RECRUITINGCongenital Adrenal Hyperplasia Once Daily Hydrocortisone Treatment
NCT04536662Phase 4UNKNOWNComparisons of Different Forms of Glucocorticoid on the Recovery of Reproductive Function in Patients With 21α-hydroxylase Deficiency
NCT02343562Phase 4UNKNOWNProbiotics for Prophylaxis of Postoperative Hirschsprungs Associated Enterocolitis
NCT07186647Phase 4COMPLETEDLaparoscopic-Assisted Transanal Pull-Through for Hirschsprung Disease in Pediatric:Short and Intermediate Outcomes of Two Different Techniques
NCT00417066Phase 4COMPLETEDFlexible GnRH Antagonist vs Flare up GnRH Agonist Protocol in Poor Responders
NCT00732693Phase 4COMPLETEDEvaluation of Physiologic and Standard Sex Steroid Replacement Regimens in Women With Premature Ovarian Failure
NCT00837616Phase 4COMPLETEDEstrogen Dosing in Turner Syndrome: Pharmacology and Metabolism
NCT01853501Phase 4UNKNOWNEffects of ADSC Therapy in Women With POF
NCT02783937Phase 4COMPLETEDFilgrastim for Premature Ovarian Insufficiency
NCT03535480Phase 4UNKNOWNAutologous Bone Marrow Stem Cell Ovarian Transplantation to Restore Ovarian Function in Premature Ovarian Failure
NCT00001521Phase 3COMPLETEDThree Drug Combination Therapy Versus Conventional Treatment of Children With Congenital Adrenal Hyperplasia
NCT02716818Phase 3COMPLETEDComparison of Chronocort® With Standard Glucocorticoid Therapy in Patients With Congenital Adrenal Hyperplasia
NCT03062280Phase 3COMPLETEDA Study of the Efficacy, Safety and Tolerability of Chronocort in Treating CAH
NCT03532022Phase 3WITHDRAWNOpen-label Comparison of Chronocort® Versus Standard Glucocorticoid Replacement Therapy
NCT04490915Phase 3ACTIVE_NOT_RECRUITINGGlobal Safety and Efficacy Registration Study of Crinecerfont for Congenital Adrenal Hyperplasia
NCT04806451Phase 3ACTIVE_NOT_RECRUITINGGlobal Safety and Efficacy Registration Study of Crinecerfont in Pediatric Participants With Classic Congenital Adrenal Hyperplasia (CAHtalyst Pediatric Study)
NCT05063994Phase 3COMPLETEDComparison of Chronocort Versus Standard Hydrocortisone Replacement Therapy in Participants Aged 16 Years and Over With Congenital Adrenal Hyperplasia
NCT05299554Phase 3COMPLETEDLong-term Safety Study of Chronocort in the Treatment of Participants With Congenital Adrenal Hyperplasia
NCT07144163Phase 3RECRUITINGA Study to Evaluate Atumelnant in Adults With Congenital Adrenal Hyperplasia
NCT03660176Phase 3NOT_YET_RECRUITINGEffects of Butyrate Enemas on Postoperative Intestinal Motility Disorders in Hirschsprung’s Disease
NCT04904081Phase 3UNKNOWNFeasibility of Use of Indocyanine Green in Pediatric Colorectal Surgery
NCT00140998Phase 3COMPLETEDEstrogen Treatment (Oral vs. Patches) in Turner Syndrome
NCT00621985Phase 2COMPLETEDDexamethasone Treatment of Congenital Adrenal Hyperplasia
NCT01735617Phase 2COMPLETEDPilot Study to Characterize and Examine the Pharmacokinetics and Efficacy of Chronocort® in Adults With CAH
NCT01771328Phase 2UNKNOWNContinuous Subcutaneous Hydrocortisone Infusion in Congenital Adrenal Hyperplasia
NCT01859312Phase 2COMPLETEDComparison of Cortisol Pump With Standard Treatment for Congenital Adrenal Hyperplasia
NCT02804178Phase 2COMPLETEDA Study of ATR-101 for the Treatment of Congenital Adrenal Hyperplasia
NCT03257462Phase 2COMPLETEDStudy of SPR001 in Adults With Classic Congenital Adrenal Hyperplasia
NCT03548246Phase 2WITHDRAWNAndrogen Reduction in Congenital Adrenal Hyperplasia
NCT03669549Phase 2TERMINATEDNevanimibe HCl for the Treatment of Classic CAH
NCT03687242Phase 2COMPLETEDStudy to Evaluate the Safety and Efficacy of SPR001 in Subjects With Classic Congenital Adrenal Hyperplasia
NCT04457336Phase 2TERMINATEDA Ph2b to Evaluate Clinical Efficacy and Safety of Tildacerfont in Adult CAH
NCT04544410Phase 2TERMINATEDA Ph2b to Evaluate Tildacerfont in the Reduction of Glucocorticoid Steroid Doses in Adult CAH
NCT05128942Phase 2TERMINATEDA Phase 2 Study to Evaluate the Safety, Efficacy and PK of Tildacerfont in Children Aged 2-17 Years With CAH
NCT05907291Phase 2COMPLETEDEvaluate the Safety, Efficacy, and Pharmacokinetics of CRN04894 in Participants With Congenital Adrenal Hyperplasia (TouCAHn)
NCT06712823Phase 2RECRUITINGAn Extension Study to Evaluate Safety and Efficacy of Atumelnant in Participants With Congenital Adrenal Hyperplasia
NCT07187375Phase 2ACTIVE_NOT_RECRUITINGPharmacokinetics, Safety and Tolerability of Crinecerfont in Participants With Congenital Adrenal Hyperplasia Who Are Less Than 2 Years Old
NCT07536269Phase 2RECRUITINGSafety, Tolerability, Pharmacokinetics and Pharmacodynamics of Crinecerfont in Participants With Classic Congenital Adrenal Hyperplasia (CAH) Who Are Less Than 4 Years Old
NCT00630838Phase 2COMPLETEDProbiotic Prophylaxis of Hirschprung’s Disease Associated Enterocolitis (HAEC)
NCT00001951Phase 2COMPLETEDHormone Replacement in Young Women With Premature Ovarian Failure
NCT00370019Phase 2WITHDRAWNEffects of an Estrogen Replacement Therapy Skin Patch on Ovulation in Women With Premature Ovarian Failure
NCT00429494Phase 2COMPLETEDGnRH Analogue for Ovarian Function Preservation in Hematopoietic Stem Cell Transplantation Patients
NCT03816852Phase 2SUSPENDEDThe Safety and Efficiency Study of Mesenchymal Stem Cell (19#iSCLife®-POI) in Premature Ovarian Insufficiency
NCT04536467Phase 2UNKNOWNPrevention of Chemotherapy-Induced Ovarian Failure With Goserelin in Premenopausal Lymphoma Patients
NCT06117982Phase 2COMPLETEDThe Impact of Granulocyte Colony Stimulating Factor on Premature Ovarian Insufficiency
NCT02349503Phase 1WITHDRAWNSafety, Pharmacokinetics and Pharmacodynamics of NBI-77860 in Adolescent Females With Congenital Adrenal Hyperplasia
NCT02574910Phase 1TERMINATEDAndrogen Reduction in Congenital Adrenal Hyperplasia, Phase 1
NCT03019614Phase 1COMPLETEDAn Open Label Study in Healthy Volunteers to Compare Chronocort® to Hydrocortisone
NCT03051893Phase 1COMPLETEDA Two-part, Study to Compare the Pharmacokinetics and Dose Proportionality of up to 6 Chronocort Formulations
NCT03718234Phase 1COMPLETEDSubcutaneous Hydrocortisone Children With Congenital Adrenal Hyperplasia
NCT07811089Phase 1NOT_YET_RECRUITINGSafety, Tolerability, Pharmacokinetics, and Pharmacodynamics of OMS1620
NCT02912104Phase 1COMPLETEDA Therapeutic Trial of Human Amniotic Epithelial Cells Transplantation for Primary Ovarian Failure
NCT03178695Phase 1COMPLETEDInovium Ovarian Rejuvenation Trials
NCT04815213Phase 1ACTIVE_NOT_RECRUITINGThe Use of Expandeded Mesenchymal Stromal Cells (MSC) in Premature Ovarian Failure (POF) in Adult Humans
NCT05138367Phase 1COMPLETEDEffects of UCA-PSCs in Women With POF
NCT06132542Phase 1UNKNOWNAutologous ADMSC Transplantation in Patients With POI
NCT02552251Phase 2/3UNKNOWNCOrticosteroid in Congenital Adrenal Hyperplasia
NCT07159841Phase 2/3RECRUITINGA Study in Pediatric Participants With Congenital Adrenal Hyperplasia (Balance-CAH)
NCT00000102Phase 1/2COMPLETEDCongenital Adrenal Hyperplasia: Calcium Channels as Therapeutic Targets
NCT00519818Phase 1/2COMPLETEDComparison of Two Forms of Hydrocortisone in Patients With Congenital Adrenal Hyperplasia

Predicted chemistry — Sugi Predict

The predicted patent-compound landscape for POR across ~30M SureChEMBL compounds — explore on Sugi Predict.