PPM1J-DT

Summary

PPM1J-DT (PPM1J divergent transcript, HGNC:55355) is a long non-coding RNA gene on chromosome 1p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55355
Approved symbol	PPM1J-DT
Name	PPM1J divergent transcript
Location	1p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261595
Ensembl biotype	lncRNA
Entrez	105378910
RNAcentral	URS00003F66D4 — lncRNA, 2125 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000566195, ENST00000751909, ENST00000751910, ENST00000751911, ENST00000751912, ENST00000751913, ENST00000751914, ENST00000751915, ENST00000751916, ENST00000751917

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000566195 — 1 exons

Exon	Start	End
ENSE00002615544	112715672	112717796

Expression profiles

Bgee: expression breadth broad, 19 present calls, max score 93.56.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.3051 / max 119.9135, expressed in 51 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
4702	0.3051	51

Top tissues by expression

19 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.56	gold quality
right testis	UBERON:0004534	64.94	gold quality
testis	UBERON:0000473	64.70	gold quality
left testis	UBERON:0004533	64.56	gold quality
multicellular organism	UBERON:0000468	62.15	gold quality
prefrontal cortex	UBERON:0000451	52.52	gold quality
heart	UBERON:0000948	50.14	silver quality
muscle of leg	UBERON:0001383	48.71	gold quality
hypothalamus	UBERON:0001898	47.71	silver quality
gastrocnemius	UBERON:0001388	46.75	gold quality
Ammon’s horn	UBERON:0001954	46.43	silver quality
Brodmann (1909) area 9	UBERON:0013540	45.62	silver quality
adipose tissue	UBERON:0001013	44.27	silver quality
placenta	UBERON:0001987	44.22	silver quality
subcutaneous adipose tissue	UBERON:0002190	41.55	silver quality
ascending aorta	UBERON:0001496	40.17	silver quality
tibial nerve	UBERON:0001323	39.33	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	37.40	silver quality
left lobe of thyroid gland	UBERON:0001120	33.48	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.