PRDM10-DT

Summary

PRDM10-DT (PRDM10 divergent transcript, HGNC:30468) is a long non-coding RNA gene on chromosome 11q24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:30468
Approved symbol	PRDM10-DT
Name	PRDM10 divergent transcript
Location	11q24.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ31394
Ensembl gene	ENSG00000233220
Ensembl biotype	lncRNA
Entrez	440072
RNAcentral	URS000075AE8C — lncRNA, 2863 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000530583, ENST00000825488

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000530583 — 1 exons

Exon	Start	End
ENSE00002164823	130002619	130005492

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 81.50.

Top tissues by expression

188 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.50	gold quality
bone marrow cell	CL:0002092	71.55	silver quality
sural nerve	UBERON:0015488	63.40	silver quality
endothelial cell	CL:0000115	59.92	gold quality
granulocyte	CL:0000094	59.19	gold quality
left testis	UBERON:0004533	58.44	gold quality
testis	UBERON:0000473	57.23	gold quality
right testis	UBERON:0004534	56.67	gold quality
buccal mucosa cell	CL:0002336	55.59	silver quality
calcaneal tendon	UBERON:0003701	53.32	gold quality
monocyte	CL:0000576	52.18	silver quality
hindlimb stylopod muscle	UBERON:0004252	52.09	silver quality
islet of Langerhans	UBERON:0000006	50.71	gold quality
prefrontal cortex	UBERON:0000451	49.58	gold quality
skin of hip	UBERON:0001554	49.54	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	49.21	gold quality
muscle of leg	UBERON:0001383	48.60	silver quality
right lobe of liver	UBERON:0001114	47.84	silver quality
gastrocnemius	UBERON:0001388	47.80	silver quality
gall bladder	UBERON:0002110	47.06	silver quality
pancreas	UBERON:0001264	46.96	gold quality
lymph node	UBERON:0000029	46.74	silver quality
tendon	UBERON:0000043	46.33	silver quality
smooth muscle tissue	UBERON:0001135	45.97	gold quality
adenohypophysis	UBERON:0002196	45.55	gold quality
pituitary gland	UBERON:0000007	45.50	gold quality
blood	UBERON:0000178	45.42	gold quality
lateral globus pallidus	UBERON:0002476	45.32	gold quality
upper leg skin	UBERON:0004262	45.04	silver quality
adrenal tissue	UBERON:0018303	44.65	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.