PRICKLE2-AS3

Summary

PRICKLE2-AS3 (PRICKLE2 antisense RNA 3, HGNC:40918) is a long non-coding RNA gene on chromosome 3p14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40918
Approved symbol	PRICKLE2-AS3
Name	PRICKLE2 antisense RNA 3
Location	3p14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226017
Ensembl biotype	lncRNA
Entrez	100874243
RNAcentral	URS000075BDA2 — lncRNA, 3101 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000473434

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000473434 — 4 exons

Exon	Start	End
ENSE00001828077	64198709	64200965
ENSE00001856962	64187544	64187605
ENSE00001912663	64190294	64190347
ENSE00001927854	64194190	64194312

Expression profiles

Bgee: expression breadth broad, 75 present calls, max score 65.95.

Top tissues by expression

174 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	65.95	silver quality
cortical plate	UBERON:0005343	60.12	gold quality
ganglionic eminence	UBERON:0004023	59.33	silver quality
endothelial cell	CL:0000115	59.28	gold quality
calcaneal tendon	UBERON:0003701	59.15	gold quality
ventricular zone	UBERON:0003053	58.30	silver quality
hindlimb stylopod muscle	UBERON:0004252	57.84	gold quality
lower lobe of lung	UBERON:0008949	57.50	silver quality
adrenal tissue	UBERON:0018303	54.12	gold quality
monocyte	CL:0000576	52.31	silver quality
tendon	UBERON:0000043	51.45	gold quality
upper leg skin	UBERON:0004262	51.33	gold quality
testis	UBERON:0000473	49.71	gold quality
corpus callosum	UBERON:0002336	48.45	gold quality
prefrontal cortex	UBERON:0000451	47.54	silver quality
vermiform appendix	UBERON:0001154	47.51	silver quality
lung	UBERON:0002048	46.60	gold quality
islet of Langerhans	UBERON:0000006	46.59	silver quality
tonsil	UBERON:0002372	46.41	gold quality
ectocervix	UBERON:0012249	46.33	gold quality
urinary bladder	UBERON:0001255	45.98	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	45.69	gold quality
gastrocnemius	UBERON:0001388	45.25	silver quality
gall bladder	UBERON:0002110	45.01	silver quality
stomach	UBERON:0000945	44.84	silver quality
small intestine	UBERON:0002108	44.66	silver quality
endometrium	UBERON:0001295	44.42	gold quality
lymph node	UBERON:0000029	43.99	silver quality
adrenal gland	UBERON:0002369	43.88	silver quality
caecum	UBERON:0001153	43.79	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.