PRKCH-AS1

Summary

PRKCH-AS1 (PRKCH antisense RNA 1, HGNC:55588) is a long non-coding RNA gene on chromosome 14q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55588
Approved symbol	PRKCH-AS1
Name	PRKCH antisense RNA 1
Location	14q23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000247287
Ensembl biotype	lncRNA
Entrez	121233923
RNAcentral	URS00026A2747 — lncRNA, 1800 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000500036, ENST00000554086, ENST00000661303, ENST00000836215

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000500036 — 2 exons

Exon	Start	End
ENSE00001979304	61303021	61307235
ENSE00001988679	61322535	61322818

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 77.25.

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	77.25	gold quality
pituitary gland	UBERON:0000007	75.28	gold quality
skin of abdomen	UBERON:0001416	74.04	gold quality
adenohypophysis	UBERON:0002196	73.99	gold quality
zone of skin	UBERON:0000014	73.90	gold quality
skin of leg	UBERON:0001511	73.74	gold quality
lymph node	UBERON:0000029	72.97	gold quality
tonsil	UBERON:0002372	72.97	gold quality
left lobe of thyroid gland	UBERON:0001120	72.88	gold quality
calcaneal tendon	UBERON:0003701	72.85	gold quality
thyroid gland	UBERON:0002046	72.74	gold quality
granulocyte	CL:0000094	72.73	gold quality
nucleus accumbens	UBERON:0001882	72.64	gold quality
right lobe of thyroid gland	UBERON:0001119	72.21	gold quality
placenta	UBERON:0001987	71.94	gold quality
upper lobe of left lung	UBERON:0008952	71.93	gold quality
vagina	UBERON:0000996	71.89	gold quality
uterine cervix	UBERON:0000002	71.61	gold quality
myometrium	UBERON:0001296	71.31	gold quality
ectocervix	UBERON:0012249	71.23	gold quality
endocervix	UBERON:0000458	71.04	gold quality
saliva-secreting gland	UBERON:0001044	70.96	gold quality
colonic epithelium	UBERON:0000397	70.93	silver quality
esophagus mucosa	UBERON:0002469	70.84	gold quality
minor salivary gland	UBERON:0001830	70.83	gold quality
lung	UBERON:0002048	70.79	gold quality
lower esophagus mucosa	UBERON:0035834	70.56	gold quality
body of uterus	UBERON:0009853	70.33	gold quality
left uterine tube	UBERON:0001303	70.12	gold quality
right uterine tube	UBERON:0001302	70.07	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.34

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.