PRKCZ-DT

Summary

PRKCZ-DT (PRKCZ divergent transcript, HGNC:55824) is a long non-coding RNA gene on chromosome 1p36.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55824
Approved symbol	PRKCZ-DT
Name	PRKCZ divergent transcript
Location	1p36.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226969
Ensembl biotype	lncRNA
Entrez	105378591
RNAcentral	URS0000A768A0 — lncRNA, 551 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000445600, ENST00000449154, ENST00000776845

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000445600 — 2 exons

Exon	Start	End
ENSE00004144933	2049202	2049468
ENSE00004144935	2049598	2050176

Expression profiles

Bgee: expression breadth broad, 86 present calls, max score 84.47.

Top tissues by expression

86 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.47	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.83	gold quality
left testis	UBERON:0004533	63.23	gold quality
right testis	UBERON:0004534	62.62	gold quality
testis	UBERON:0000473	62.46	gold quality
right lung	UBERON:0002167	62.39	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.12	gold quality
gall bladder	UBERON:0002110	60.07	gold quality
lymph node	UBERON:0000029	59.66	gold quality
cortex of kidney	UBERON:0001225	59.21	gold quality
kidney	UBERON:0002113	56.65	gold quality
blood	UBERON:0000178	56.29	gold quality
monocyte	CL:0000576	55.86	gold quality
islet of Langerhans	UBERON:0000006	54.71	gold quality
adult mammalian kidney	UBERON:0000082	54.48	gold quality
metanephros cortex	UBERON:0010533	53.98	gold quality
liver	UBERON:0002107	53.71	gold quality
lung	UBERON:0002048	53.06	gold quality
mucosa of transverse colon	UBERON:0004991	52.86	gold quality
upper lobe of left lung	UBERON:0008952	52.69	gold quality
left lobe of thyroid gland	UBERON:0001120	52.55	gold quality
pituitary gland	UBERON:0000007	52.35	gold quality
Brodmann (1909) area 9	UBERON:0013540	52.15	gold quality
thyroid gland	UBERON:0002046	51.78	gold quality
adenohypophysis	UBERON:0002196	51.45	gold quality
right lobe of liver	UBERON:0001114	51.16	gold quality
right lobe of thyroid gland	UBERON:0001119	50.59	gold quality
multicellular organism	UBERON:0000468	50.44	gold quality
apex of heart	UBERON:0002098	50.42	gold quality
rectum	UBERON:0001052	50.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.53

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.