PRKCZ
gene geneOn this page
Also known as PKC2
Summary
PRKCZ (protein kinase C zeta, HGNC:9412) is a protein-coding gene on chromosome 1p36.33, encoding Protein kinase C zeta type (Q05513). Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions in phosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell pola….
Protein kinase C (PKC) zeta is a member of the PKC family of serine/threonine kinases which are involved in a variety of cellular processes such as proliferation, differentiation and secretion. Unlike the classical PKC isoenzymes which are calcium-dependent, PKC zeta exhibits a kinase activity which is independent of calcium and diacylglycerol but not of phosphatidylserine. Furthermore, it is insensitive to typical PKC inhibitors and cannot be activated by phorbol ester. Unlike the classical PKC isoenzymes, it has only a single zinc finger module. These structural and biochemical properties indicate that the zeta subspecies is related to, but distinct from other isoenzymes of PKC. Alternative splicing results in multiple transcript variants encoding different isoforms.
Source: NCBI Gene 5590 — RefSeq curated summary.
At a glance
- GWAS associations: 13
- Clinical variants (ClinVar): 29 total — 1 pathogenic
- Phenotypes (HPO): 99
- Druggable target: yes — 16 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_002744
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:9412 |
| Approved symbol | PRKCZ |
| Name | protein kinase C zeta |
| Location | 1p36.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | PKC2 |
| Ensembl gene | ENSG00000067606 |
| Ensembl biotype | protein_coding |
| OMIM | 176982 |
| Entrez | 5590 |
Gene structure
Transcript identifiers
Ensembl transcripts: 31 — 21 protein_coding, 5 protein_coding_CDS_not_defined, 3 retained_intron, 2 nonsense_mediated_decay
ENST00000378567, ENST00000400921, ENST00000419838, ENST00000461106, ENST00000461465, ENST00000466352, ENST00000466651, ENST00000468310, ENST00000470511, ENST00000470596, ENST00000470986, ENST00000471018, ENST00000472017, ENST00000478770, ENST00000479263, ENST00000479566, ENST00000481140, ENST00000482686, ENST00000484419, ENST00000486681, ENST00000495347, ENST00000496325, ENST00000497183, ENST00000503297, ENST00000503672, ENST00000505322, ENST00000877862, ENST00000877863, ENST00000877864, ENST00000926524, ENST00000965048
RefSeq mRNA: 8 — MANE Select: NM_002744
NM_001033581, NM_001033582, NM_001242874, NM_001350803, NM_001350804, NM_001350805, NM_001350806, NM_002744
CCDS: CCDS37, CCDS41229, CCDS55563
Canonical transcript exons
ENST00000378567 — 18 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002316473 | 2050411 | 2050701 |
| ENSE00003481487 | 2172301 | 2172388 |
| ENSE00003513439 | 2169518 | 2169604 |
| ENSE00003525770 | 2155995 | 2156092 |
| ENSE00003561737 | 2174754 | 2174833 |
| ENSE00003563170 | 2055441 | 2055562 |
| ENSE00003563212 | 2056484 | 2056573 |
| ENSE00003609132 | 2175224 | 2175313 |
| ENSE00003612876 | 2184583 | 2184698 |
| ENSE00003626317 | 2184922 | 2185395 |
| ENSE00003640274 | 2173897 | 2174016 |
| ENSE00003653496 | 2135262 | 2135347 |
| ENSE00003656964 | 2144210 | 2144341 |
| ENSE00003659235 | 2172055 | 2172190 |
| ENSE00003783979 | 2150790 | 2150978 |
| ENSE00003784140 | 2146027 | 2146108 |
| ENSE00003789547 | 2059541 | 2059591 |
| ENSE00003791533 | 2148872 | 2148924 |
Expression profiles
Bgee: expression breadth ubiquitous, 242 present calls, max score 98.95.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 12.8181 / max 443.6639, expressed in 1177 samples.
FANTOM5 promoters (18 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 165 | 3.7024 | 886 |
| 166 | 3.3058 | 174 |
| 164 | 1.5442 | 695 |
| 171 | 1.0432 | 123 |
| 167 | 1.0277 | 158 |
| 173 | 0.5630 | 93 |
| 174 | 0.5360 | 53 |
| 177 | 0.3245 | 155 |
| 168 | 0.2571 | 84 |
| 172 | 0.1718 | 70 |
Top tissues by expression
284 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right hemisphere of cerebellum | UBERON:0014890 | 98.95 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 98.91 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 98.81 | gold quality |
| cerebellar cortex | UBERON:0002129 | 98.78 | gold quality |
| cerebellum | UBERON:0002037 | 98.51 | gold quality |
| right frontal lobe | UBERON:0002810 | 98.21 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 98.10 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 98.02 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 98.02 | gold quality |
| prefrontal cortex | UBERON:0000451 | 97.88 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 97.88 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 97.81 | gold quality |
| primary visual cortex | UBERON:0002436 | 97.75 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 97.50 | gold quality |
| occipital lobe | UBERON:0002021 | 97.38 | gold quality |
| frontal cortex | UBERON:0001870 | 97.25 | gold quality |
| nucleus accumbens | UBERON:0001882 | 97.24 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 97.19 | gold quality |
| pons | UBERON:0000988 | 97.18 | gold quality |
| putamen | UBERON:0001874 | 97.15 | gold quality |
| neocortex | UBERON:0001950 | 96.97 | gold quality |
| parietal lobe | UBERON:0001872 | 96.89 | gold quality |
| cerebral cortex | UBERON:0000956 | 96.87 | gold quality |
| postcentral gyrus | UBERON:0002581 | 96.81 | gold quality |
| telencephalon | UBERON:0001893 | 96.73 | gold quality |
| cingulate cortex | UBERON:0003027 | 96.71 | gold quality |
| Ammon’s horn | UBERON:0001954 | 96.62 | gold quality |
| right testis | UBERON:0004534 | 96.62 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 96.59 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 96.59 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6701 | yes | 41.39 |
| E-MTAB-6142 | no | 1.95 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): NR1I2, PPARG, SP1
miRNA regulators (miRDB)
12 targeting PRKCZ, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-221-5P | 99.86 | 65.45 | 1052 |
| HSA-MIR-8073 | 99.86 | 65.21 | 1118 |
| HSA-MIR-148A-3P | 99.74 | 73.77 | 1700 |
| HSA-MIR-148B-3P | 99.74 | 73.75 | 1700 |
| HSA-MIR-152-3P | 99.74 | 73.75 | 1703 |
| HSA-MIR-582-5P | 99.47 | 70.79 | 2635 |
| HSA-MIR-4691-5P | 98.41 | 66.77 | 1343 |
| HSA-MIR-6792-3P | 98.41 | 66.86 | 1359 |
| HSA-MIR-132-5P | 96.61 | 65.79 | 115 |
| HSA-MIR-3622B-5P | 94.62 | 64.58 | 835 |
| HSA-MIR-6774-3P | 89.14 | 65.20 | 68 |
| HSA-MIR-1307-3P | 66.08 | 59.35 | 14 |
Literature-anchored findings (GeneRIF, showing 40)
- Isoforms of protein kinase C and their distribution in human adrenal cortex and tumors (PMID:11740573)
- Investigation of the inhibitory effects of chelerythrine chloride on the translocation of the protein kinase C betaI, betaII, zeta in human neutrophils (PMID:11765038)
- PKC-zeta is required in EGF protection of microtubules and intestinal barrier integrity against oxidant injury. (PMID:11960776)
- role of PKCzeta in T cells through the control of NFAT function by modulating the activity of its transactivation domain (PMID:12021260)
- PKC zeta expressed in human neutrophils can phosphorylate p47phox and induce both its translocation and NADPH oxidase activation as well as the binding of p47phox to the cytosolic fragment of p22phox. (PMID:12056906)
- REVIEW:Interaction of protein kinase C isozymes with membranes containing anionic phospholipids utilizing fluorescent phorbol esters to probe the properties of the C1 domains (PMID:12093536)
- shows for the first time that topoisomerase II beta is a substrate for PKC zeta, and that PKC zeta may significantly influence topoisomerase II inhibitor-induced cytotoxicity by altering topoisomerase II beta activity through its kinase function (PMID:12105221)
- EGF protects against oxidative disruption of the intestinal barrier by stabilizing the cytoskeleton in large part through the activation of PKC-zeta and downregulation of iNOS (PMID:12223351)
- The adapter protein ZIP binds Grb14 and regulates its inhibitory action on insulin signaling by recruiting protein kinase Czeta. (PMID:12242277)
- catalytic domain of PKC zeta is intrinsically inactive and dependent on the transphosphorylation of the activation lo (PMID:12244101)
- the role of PKCzeta in the negative regulation of drug-induced SM-CER pathway. (PMID:12435813)
- Protein kinase C zeta-GATA-2 signaling regulates VCAM1 stimulation by thrombin in endothelial cells (PMID:12493764)
- hypoxia decreases Na,K-ATPase activity in alveolar epithelial cells by triggering its endocytosis through mitochondrial reactive oxygen species and PKC-zeta-mediated phosphorylation of the Na,K-ATPase alpha(1) subunit (PMID:12671055)
- PKC zeta has a role in the actin organization in ET-1-stimulated cells may play a role in myometrial contraction in pregnant women. (PMID:12748064)
- The novel varepsilon and eta and atypical zeta, but not the conventional alpha and beta and the novel delta PKCs, may be involved in the signaling pathways involved in thrombin-induced human platelet P-selectin expression (PMID:12783114)
- PKCzeta has a role in regulating cell survival in tumor cells (PMID:12791393)
- Defective aPKC activation contributes to skeletal muscle insulin resistance in glucose intolerance and type 2 diabetes (PMID:12882907)
- enteropathogenic E coli infection of intestinal epithelial cells activates several signaling pathways including PKC zeta and ERK that lead to NF-kappa B activation, thus ensuring the proinflammatory response. (PMID:12900386)
- disregulation of the function of atypical zeta PKC might be involved in the acquisition of an invasive and metastatic phenotype in pancreatic adenocarcinoma cells. (PMID:12920244)
- PRKCZ gene may be associated with type 2 diabetes in Han population in North China. The haplotypes at five SNP sites in this gene may be responsible for this association. (PMID:12970910)
- protein kinase C iota/lambda binds to Rab 2, which inhibits aPKCiota/lambda-dependent GADPH phosphorylation [Protein kinase C lambda] (PMID:14570876)
- PKCzeta is responsible for the activation of HIF-alpha by inhibiting the mRNA expression of FIH-1 thus promoting the transcription of hypoxia-inducible genes. (PMID:14744756)
- phosphorylation of Ser(318) by PKC-zeta might contribute to the inhibitory effect of prolonged hyperinsulinemia on IRS-1 function. (PMID:15069075)
- identification of neuronal protein KIBRA as a novel substrate (PMID:15081397)
- There was expression of protein kinase C zeta in abnormal muscle fibers. Protein kinase C isoforms may play a role in the pathogenesis of myofibrillar myopathy. (PMID:15159477)
- involvement of PKC zeta in thrombin-induced permeability changes in human umbilical vein endothelial cells (PMID:15172966)
- GTPase RhoA and atypical protein kinase Czeta are required for TLR2-mediated gene transcription. (PMID:15210811)
- PKCzeta activity is regulated by nucleotide exchange factor ECT2 (PMID:15254234)
- Single nucleotide polymorphisms in protein kinase Cz (PKCZ) gene probably play a role in the susceptibility to type 2 diabetes by affecting the expression level of the relevant genes. (PMID:15285019)
- PKC-zeta, is critical to regulation of LPS-induced TLR4 lipid raft mobilization within macrophages. (PMID:15313379)
- PKCzeta could act as a modulator of nucleotide excision repair activity by regulating the expression of XPC/hHR23B heterodimer (PMID:15358551)
- The differential regulation of protein kinase C-zeta by enteropathogenic E. coli and enterohemorrhagic E. coli may in part explain the less profound effect of the latter on the barrier function of tight junctions. (PMID:15362041)
- We analyzed the dependence of the expression of some selected protein kinase C isoenzymes on the availability and/or action of androgens. (PMID:15499829)
- Disruption of the cellular environment through genetic mutation, disease, injury, or exposure to pro-oxidants, alcohol, or other insults can induce pathological PKC activation. (PMID:15544481)
- A role for PKCzeta in relaxin-mediated stimulation of cAMP was demonstrated. (PMID:15604116)
- stromal cell-derived factor 1 triggered PKC-zeta phosphorylation, translocation to the plasma membrane, and kinase activity (PMID:15630457)
- Results indicate that protein kinase C (PKC) zeta modulates hMutS alpha (MSH2, MSH6)stability and protein levels, and suggest a role for PKC zeta in genome stability by regulating mismatch repair activity. (PMID:15808853)
- Ajuba is a new cytosolic component of the IL-1 signaling pathway modulating IL-1-induced NF-kappaB activation by influencing the assembly and activity of the aPKC/p62/TRAF6 multiprotein signaling complex (PMID:15870274)
- PKCZ mediates opposing effects on Na(+)-K(+)-Exchanging ATPase activity in a breast neoplasm cell line. (PMID:15887250)
- data support the notion that PKCzeta is essential for LPS-induced NF-kB p65 subunit nuclear translocation in human myometrial cells (PMID:15935276)
Cross-species orthologs
10 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | prkcz | ENSDARG00000043332 |
| mus_musculus | Prkcz | ENSMUSG00000029053 |
| rattus_norvegicus | Prkcz | ENSRNOG00000015480 |
| drosophila_melanogaster | Pkc53E | FBGN0003091 |
| drosophila_melanogaster | inaC | FBGN0004784 |
| drosophila_melanogaster | Pkn | FBGN0020621 |
| drosophila_melanogaster | Pkcdelta | FBGN0287828 |
| caenorhabditis_elegans | WBGENE00004033 | |
| caenorhabditis_elegans | WBGENE00006599 | |
| caenorhabditis_elegans | WBGENE00009793 |
Paralogs (9): PRKCH (ENSG00000027075), PKN2 (ENSG00000065243), PKN1 (ENSG00000123143), PRKCG (ENSG00000126583), PRKCA (ENSG00000154229), PKN3 (ENSG00000160447), PRKCI (ENSG00000163558), PRKCB (ENSG00000166501), PRKCE (ENSG00000171132)
Protein
Protein identifiers
Protein kinase C zeta type — Q05513 (reviewed: Q05513)
Alternative names: nPKC-zeta
All UniProt accessions (16): Q05513, D6RAN5, D6RAU1, D6RBD4, D6RC84, D6RCN4, D6RD31, D6RDM0, D6REZ8, D6RG01, D6RGG1, D6RJG4, E9PBE1, F2Z2H9, F2Z3C5, J3KRP7
UniProt curated annotations — full annotation on UniProt →
Function. Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions in phosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell polarity, inflammatory response and maintenance of long-term potentiation (LTP). Upon lipopolysaccharide (LPS) treatment in macrophages, or following mitogenic stimuli, functions downstream of PI3K to activate MAP2K1/MEK1-MAPK1/ERK2 signaling cascade independently of RAF1 activation. Required for insulin-dependent activation of AKT3, but may function as an adapter rather than a direct activator. Upon insulin treatment may act as a downstream effector of PI3K and contribute to the activation of translocation of the glucose transporter SLC2A4/GLUT4 and subsequent glucose transport in adipocytes. In EGF-induced cells, binds and activates MAP2K5/MEK5-MAPK7/ERK5 independently of its kinase activity and can activate JUN promoter through MEF2C. Through binding with SQSTM1/p62, functions in interleukin-1 signaling and activation of NF-kappa-B with the specific adapters RIPK1 and TRAF6. Participates in TNF-dependent transactivation of NF-kappa-B by phosphorylating and activating IKBKB kinase, which in turn leads to the degradation of NF-kappa-B inhibitors. In migrating astrocytes, forms a cytoplasmic complex with PARD6A and is recruited by CDC42 to function in the establishment of cell polarity along with the microtubule motor and dynein. In association with FEZ1, stimulates neuronal differentiation in PC12 cells. In the inflammatory response, is required for the T-helper 2 (Th2) differentiation process, including interleukin production, efficient activation of JAK1 and the subsequent phosphorylation and nuclear translocation of STAT6. May be involved in development of allergic airway inflammation (asthma), a process dependent on Th2 immune response. In the NF-kappa-B-mediated inflammatory response, can relieve SETD6-dependent repression of NF-kappa-B target genes by phosphorylating the RELA subunit at ‘Ser-311’. Phosphorylates VAMP2 in vitro. Phosphorylates and activates LRRK1, which phosphorylates RAB proteins involved in intracellular trafficking. Involved in late synaptic long term potention phase in CA1 hippocampal cells and long term memory maintenance.
Subunit / interactions. Forms a ternary complex with SQSTM1 and KCNAB2. Forms another ternary complex with SQSTM1 and GABRR3. Forms a complex with SQSTM1 and MAP2K5. Interacts with PARD6A, PARD6B, PARD6G and SQSTM1. Part of a complex with PARD3, PARD6A or PARD6B or PARD6G and CDC42 or RAC1. Interacts with ADAP1/CENTA1. Forms a ternary complex composed of SQSTM1 and PAWR. Interacts directly with SQSTM1. Interacts with IKBKB. Interacts (via the protein kinase domain) with WWC1. Forms a tripartite complex with WWC1 and DDR1, but predominantly in the absence of collagen. Component of the Par polarity complex, composed of at least phosphorylated PRKCZ, PARD3 and TIAM1. Interacts with PDPK1 (via N-terminal region). Interacts with WDFY2 (via WD repeats 1-3). Interacts with VAMP2. Forms a complex with WDFY2 and VAMP2. Interacts with APPL1. Interacts with WWC1, WWC2 and WWC3.
Subcellular location. Cytoplasm. Endosome. Cell junction. Membrane Cytoplasm.
Tissue specificity. Expressed in brain, and to a lesser extent in lung, kidney and testis.
Post-translational modifications. CDH5 is required for its phosphorylation at Thr-410. Phosphorylated by protein kinase PDPK1; phosphorylation is inhibited by the apoptotic C-terminal cleavage product of PKN2. Phosphorylation at Thr-410 by PI3K activates the kinase.
Activity regulation. Atypical PKCs (PRKCI and PRKCZ) exhibit an elevated basal enzymatic activity (that may be due to the interaction with SMG1 or SQSTM1) and are not regulated by diacylglycerol, phosphatidylserine, phorbol esters or calcium ions. Two specific sites, Thr-410 (activation loop of the kinase domain) and Thr-560 (turn motif), need to be phosphorylated for its full activation. Phosphatidylinositol 3,4,5-trisphosphate might be a physiological activator. Isoform 2: Constitutively active.
Domain organisation. The PB1 domain mediate mutually exclusive interactions with SQSTM1 and PARD6B. The C1 domain does not bind the diacylglycerol (DAG).
Miscellaneous. Produced by alternative promoter usage.
Similarity. Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q05513-1 | 1 | yes |
| Q05513-2 | 2, PKMzeta | |
| Q05513-3 | 3 |
RefSeq proteins (8): NP_001028753, NP_001028754, NP_001229803, NP_001337732, NP_001337733, NP_001337734, NP_001337735, NP_002735* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000270 | PB1_dom | Domain |
| IPR000719 | Prot_kinase_dom | Domain |
| IPR000961 | AGC-kinase_C | Domain |
| IPR002219 | PKC_DAG/PE | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR012233 | PKC | Family |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR017892 | Pkinase_C | Domain |
| IPR020454 | DAG/PE-bd | Domain |
| IPR034662 | aPKC_zeta | Domain |
| IPR034877 | PB1_aPKC | Domain |
| IPR046349 | C1-like_sf | Homologous_superfamily |
| IPR047314 | C1_aPKC_zeta | Domain |
| IPR053793 | PB1-like | Domain |
Pfam: PF00069, PF00130, PF00433, PF00564
Enzyme classification (BRENDA):
- EC 2.7.11.13 — protein kinase C (BRENDA: 25 organisms, 203 substrates, 258 inhibitors, 20 Km, 1 kcat entries)
Substrate kinetics (BRENDA)
4 substrates with measured Km, best-characterized 4. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| FKKQGSFAKKK | 0.0166–0.0599 | 10 |
| ATP | 0.0001–0.0828 | 4 |
| N6-PHENYL-ATP | 0.0124 | 1 |
| S6-(229-239) PEPTIDE | 0.0036 | 1 |
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (28 total): sequence conflict 7, sequence variant 4, domain 3, modified residue 3, mutagenesis site 3, splice variant 2, binding site 2, chain 1, zinc finger region 1, region of interest 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q05513-F1 | 79.50 | 0.39 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 376 (proton acceptor)
Ligand- & substrate-binding residues (2): 258–266; 281
Post-translational modifications (3): 560, 591, 410
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 19 | no effect on interaction with sqstm1 and pard6b. |
| 62 | loss of interaction with sqstm1 and pard6b. |
| 66 | loss of interaction with sqstm1 and pard6b. |
Function
Pathways and Gene Ontology
Reactome pathways
19 pathways
| ID | Pathway |
|---|---|
| R-HSA-114604 | GPVI-mediated activation cascade |
| R-HSA-2173791 | TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) |
| R-HSA-5218921 | VEGFR2 mediated cell proliferation |
| R-HSA-5668599 | RHO GTPases Activate NADPH Oxidases |
| R-HSA-9634635 | Estrogen-stimulated signaling through PRKCZ |
| R-HSA-109582 | Hemostasis |
| R-HSA-162582 | Signal Transduction |
| R-HSA-170834 | Signaling by TGF-beta Receptor Complex |
| R-HSA-194138 | Signaling by VEGF |
| R-HSA-194315 | Signaling by Rho GTPases |
| R-HSA-195258 | RHO GTPase Effectors |
| R-HSA-4420097 | VEGFA-VEGFR2 Pathway |
| R-HSA-76002 | Platelet activation, signaling and aggregation |
| R-HSA-8939211 | ESR-mediated signaling |
| R-HSA-9006931 | Signaling by Nuclear Receptors |
| R-HSA-9006934 | Signaling by Receptor Tyrosine Kinases |
| R-HSA-9006936 | Signaling by TGFB family members |
| R-HSA-9009391 | Extra-nuclear estrogen signaling |
| R-HSA-9716542 | Signaling by Rho GTPases, Miro GTPases and RHOBTB3 |
MSigDB gene sets: 647 (showing top):
GSE45365_NK_CELL_VS_CD11B_DC_UP, GOBP_REGULATION_OF_CELL_ACTIVATION, GOBP_NEGATIVE_REGULATION_OF_PROTEIN_CONTAINING_COMPLEX_ASSEMBLY, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_POSITIVE_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX, GOBP_REGULATION_OF_ALPHA_BETA_T_CELL_ACTIVATION, GOBP_POSITIVE_REGULATION_OF_HEMOPOIESIS, GOBP_ESTABLISHMENT_OR_MAINTENANCE_OF_CELL_POLARITY, GOBP_NEURON_PROJECTION_EXTENSION, GOBP_INFLAMMATORY_RESPONSE, GOBP_T_CELL_ACTIVATION_INVOLVED_IN_IMMUNE_RESPONSE, GOBP_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, BHATI_G2M_ARREST_BY_2METHOXYESTRADIOL_DN
GO Biological Process (24): microtubule cytoskeleton organization (GO:0000226), protein phosphorylation (GO:0006468), inflammatory response (GO:0006954), signal transduction (GO:0007165), establishment of cell polarity (GO:0030010), negative regulation of protein-containing complex assembly (GO:0031333), positive regulation of interleukin-10 production (GO:0032733), positive regulation of interleukin-13 production (GO:0032736), positive regulation of interleukin-4 production (GO:0032753), positive regulation of interleukin-5 production (GO:0032754), cellular response to insulin stimulus (GO:0032869), intracellular signal transduction (GO:0035556), negative regulation of apoptotic process (GO:0043066), establishment or maintenance of epithelial cell apical/basal polarity (GO:0045197), positive regulation of T-helper 2 cell differentiation (GO:0045630), negative regulation of insulin receptor signaling pathway (GO:0046627), positive regulation of insulin receptor signaling pathway (GO:0046628), obsolete positive regulation of NF-kappaB transcription factor activity (GO:0051092), long-term synaptic potentiation (GO:0060291), positive regulation of ERK1 and ERK2 cascade (GO:0070374), protein localization to plasma membrane (GO:0072659), neuron projection extension (GO:1990138), positive regulation of excitatory postsynaptic potential (GO:2000463), positive regulation of T-helper 2 cell cytokine production (GO:2000553)
GO Molecular Function (12): protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), diacylglycerol-dependent serine/threonine kinase activity (GO:0004697), ATP binding (GO:0005524), zinc ion binding (GO:0008270), insulin receptor substrate binding (GO:0043560), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740), metal ion binding (GO:0046872)
GO Cellular Component (27): nuclear envelope (GO:0005635), cytoplasm (GO:0005737), endosome (GO:0005768), centriole (GO:0005814), cytosol (GO:0005829), plasma membrane (GO:0005886), cell-cell junction (GO:0005911), bicellular tight junction (GO:0005923), membrane (GO:0016020), apical plasma membrane (GO:0016324), nuclear matrix (GO:0016363), cell junction (GO:0030054), vesicle (GO:0031982), myelin sheath abaxonal region (GO:0035748), ciliary basal body (GO:0036064), axon hillock (GO:0043203), apical cortex (GO:0045179), extracellular exosome (GO:0070062), tight junction (GO:0070160), sperm midpiece (GO:0097225), sperm end piece (GO:0097229), PAR polarity complex (GO:0120157), nucleus (GO:0005634), microtubule organizing center (GO:0005815), cilium (GO:0005929), cell cortex (GO:0005938), anchoring junction (GO:0070161)
Reactome top-level categories
Rollup of top-14 pathways:
| Category | Pathways |
|---|---|
| Signal Transduction | 4 |
| Platelet activation, signaling and aggregation | 1 |
| Signaling by TGF-beta Receptor Complex | 1 |
| VEGFA-VEGFR2 Pathway | 1 |
| RHO GTPase Effectors | 1 |
| Extra-nuclear estrogen signaling | 1 |
| Signaling by TGFB family members | 1 |
| Signaling by Receptor Tyrosine Kinases | 1 |
| Signaling by Rho GTPases, Miro GTPases and RHOBTB3 | 1 |
| Signaling by Rho GTPases | 1 |
| Signaling by VEGF | 1 |
| Hemostasis | 1 |
| Signaling by Nuclear Receptors | 1 |
| ESR-mediated signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 8 |
| positive regulation of cytokine production | 4 |
| intracellular anatomical structure | 2 |
| insulin receptor signaling pathway | 2 |
| regulation of insulin receptor signaling pathway | 2 |
| protein kinase activity | 2 |
| endomembrane system | 2 |
| microtubule organizing center | 2 |
| cytoskeleton organization | 1 |
| microtubule-based process | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| defense response | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| establishment or maintenance of cell polarity | 1 |
| regulation of protein-containing complex assembly | 1 |
| negative regulation of cellular component organization | 1 |
| protein-containing complex assembly | 1 |
| interleukin-10 production | 1 |
| regulation of interleukin-10 production | 1 |
| interleukin-13 production | 1 |
| regulation of interleukin-13 production | 1 |
| interleukin-4 production | 1 |
| regulation of interleukin-4 production | 1 |
| interleukin-5 production | 1 |
| regulation of interleukin-5 production | 1 |
| response to insulin | 1 |
| cellular response to peptide hormone stimulus | 1 |
| signal transduction | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| negative regulation of programmed cell death | 1 |
| establishment or maintenance of apical/basal cell polarity | 1 |
| positive regulation of immune effector process | 1 |
| positive regulation of type 2 immune response | 1 |
| T-helper 2 cell differentiation | 1 |
Protein interactions and networks
STRING
3046 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PRKCZ | PARD3 | Q8TEW0 | 992 |
| PRKCZ | CDC42 | P21181 | 986 |
| PRKCZ | SQSTM1 | Q13501 | 943 |
| PRKCZ | PARD6A | Q9NPB6 | 940 |
| PRKCZ | PARD6B | Q9BYG5 | 917 |
| PRKCZ | PARD6G | Q9BYG4 | 883 |
| PRKCZ | WWC1 | Q8IX03 | 846 |
| PRKCZ | TRAF6 | Q9Y4K3 | 820 |
| PRKCZ | KCNAB2 | Q13303 | 769 |
| PRKCZ | TJP1 | Q07157 | 750 |
| PRKCZ | OCLN | Q16625 | 741 |
| PRKCZ | SLC39A1 | Q9NY26 | 741 |
| PRKCZ | RHOA | P06749 | 665 |
| PRKCZ | CTNNB1 | P35222 | 631 |
| PRKCZ | MAP2K5 | Q13163 | 630 |
IntAct
95 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| RICTOR | MTOR | psi-mi:“MI:0914”(association) | 0.970 |
| PARD6B | PRKCI | psi-mi:“MI:0914”(association) | 0.960 |
| PRKCZ | PARD6B | psi-mi:“MI:0915”(physical association) | 0.950 |
| PARD6A | PRKCI | psi-mi:“MI:0914”(association) | 0.950 |
| PRKCZ | PARD6A | psi-mi:“MI:0915”(physical association) | 0.910 |
| PARD6A | PRKCZ | psi-mi:“MI:0403”(colocalization) | 0.910 |
| PARD6A | PRKCZ | psi-mi:“MI:0915”(physical association) | 0.910 |
| PRKCZ | PRKCI | psi-mi:“MI:0914”(association) | 0.890 |
| LLGL2 | PRKCI | psi-mi:“MI:0914”(association) | 0.890 |
| PARD6G | PRKCZ | psi-mi:“MI:0915”(physical association) | 0.890 |
| PRKCZ | PRKCI | psi-mi:“MI:0915”(physical association) | 0.890 |
| STK24 | STRN | psi-mi:“MI:0914”(association) | 0.870 |
| PRKCZ | NIPSNAP2 | psi-mi:“MI:0914”(association) | 0.730 |
| PARD6G | PRKCI | psi-mi:“MI:0914”(association) | 0.720 |
| C1QBP | PRKCZ | psi-mi:“MI:0915”(physical association) | 0.670 |
| LLGL1 | DNAJA2 | psi-mi:“MI:0914”(association) | 0.640 |
| PRKCZ | AGER | psi-mi:“MI:0915”(physical association) | 0.610 |
| AGER | PRKCZ | psi-mi:“MI:0915”(physical association) | 0.610 |
BioGRID (574): AKT1 (Affinity Capture-Western), AKT2 (Affinity Capture-Western), PRKCZ (Affinity Capture-Western), PRKCZ (Affinity Capture-Western), AKT1 (Biochemical Activity), PRKCZ (Affinity Capture-Western), PRKCZ (Affinity Capture-Western), PRKCZ (Two-hybrid), MAPK7 (Biochemical Activity), PRKCZ (Two-hybrid), PRKCZ (Affinity Capture-Western), C1QBP (Affinity Capture-MS), CKAP4 (Affinity Capture-MS), DYNLL1 (Affinity Capture-MS), LLGL1 (Affinity Capture-MS)
ESM2 similar proteins: A1Z9X0, A8WUG4, A8XWC4, F1M7Y5, O13310, O19111, O74536, O97627, P00518, P07934, P09217, P13286, P23443, P26817, P26818, P26819, P31325, P34722, P35626, P41743, P54645, P54646, P67998, P67999, P83099, Q02111, Q02956, Q04759, Q05513, Q09137, Q12706, Q13131, Q16816, Q19266, Q21734, Q28948, Q2KJ16, Q3UYH7, Q5EG47, Q5R4K9
Diamond homologs: A1A4I4, A1Z7T0, A1Z9X0, A7MBL8, A8KBH6, A8WUG4, F1M7Y5, O08874, O19111, O42632, P04409, P05126, P05128, P05129, P05130, P05696, P05771, P05772, P09215, P09216, P09217, P10102, P10829, P10830, P13677, P13678, P16054, P17252, P20444, P23298, P24583, P24723, P28867, P31748, P31749, P31750, P31751, P34722, P34885, P36582
SIGNOR signaling
77 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PRKCZ | down-regulates | GSK3B | phosphorylation |
| PRKCZ | down-regulates | IRS1 | phosphorylation |
| PRKCZ | down-regulates | MARK2 | phosphorylation |
| PRKCZ | down-regulates | MARK3 | phosphorylation |
| PRKCZ | up-regulates | CHAT | phosphorylation |
| PRKCZ | down-regulates | ADD2 | phosphorylation |
| PRKCZ | down-regulates | CASP9 | phosphorylation |
| PRKCZ | down-regulates | MYH10 | phosphorylation |
| PRKCZ | up-regulates | SP1 | phosphorylation |
| PRKCZ | up-regulates | RELA | phosphorylation |
| PRKCZ | “down-regulates activity” | BAX | phosphorylation |
| PRKCZ | “up-regulates activity” | STK11 | phosphorylation |
| PRKCZ | up-regulates | AQP9 | phosphorylation |
| PRKCZ | up-regulates | NR1H4 | phosphorylation |
| PRKCZ | unknown | TRAF2 | phosphorylation |
| PRKCZ | up-regulates | STK11 | phosphorylation |
| PRKCZ | up-regulates | NfKb-p65/p50 | phosphorylation |
| PRKCZ | “down-regulates quantity by destabilization” | IRS1 | phosphorylation |
| 1,2-diacyl-sn-glycerol | “up-regulates activity” | PRKCZ | binding |
| PRKCZ | “up-regulates activity” | AKT3 | phosphorylation |
| PRKCZ | “up-regulates activity” | IKBKB | phosphorylation |
| PRKCZ | “up-regulates activity” | PSEN1 | phosphorylation |
| PRKCZ | “down-regulates activity” | HABP4 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 59 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Tight junction interactions | 6 | 46.0× | 1e-06 |
| Constitutive Signaling by AKT1 E17K in Cancer | 5 | 44.1× | 1e-05 |
| VEGFR2 mediated vascular permeability | 5 | 42.5× | 1e-05 |
| PI3K/AKT Signaling in Cancer | 5 | 38.4× | 2e-05 |
| Signaling by ERBB2 | 5 | 36.0× | 2e-05 |
| Programmed Cell Death | 7 | 21.4× | 8e-06 |
| Extra-nuclear estrogen signaling | 6 | 21.3× | 2e-05 |
| Apoptosis | 6 | 21.0× | 2e-05 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| establishment or maintenance of epithelial cell apical/basal polarity | 7 | 75.3× | 3e-09 |
| establishment of cell polarity | 5 | 35.5× | 8e-05 |
| obsolete positive regulation of NF-kappaB transcription factor activity | 5 | 19.0× | 1e-03 |
| axonogenesis | 5 | 14.9× | 2e-03 |
| negative regulation of apoptotic process | 11 | 7.1× | 8e-05 |
| intracellular signal transduction | 9 | 6.3× | 1e-03 |
| inflammatory response | 8 | 5.6× | 5e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
29 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 6 |
| Likely benign | 6 |
| Benign | 3 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 394133 | GRCh37/hg19 1p36.33(chr1:1538143-2140271)x1 | Pathogenic |
SpliceAI
0 predictions. Top by Δscore:
AlphaMissense
3960 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:2150857:T:C | F252S | 1.000 |
| 1:2150872:T:A | V257D | 1.000 |
| 1:2150875:T:A | I258N | 1.000 |
| 1:2150877:G:A | G259R | 1.000 |
| 1:2150877:G:C | G259R | 1.000 |
| 1:2150877:G:T | G259W | 1.000 |
| 1:2150878:G:A | G259E | 1.000 |
| 1:2150878:G:C | G259A | 1.000 |
| 1:2150878:G:T | G259V | 1.000 |
| 1:2150880:C:A | R260S | 1.000 |
| 1:2150881:G:C | R260P | 1.000 |
| 1:2150883:G:A | G261R | 1.000 |
| 1:2150883:G:C | G261R | 1.000 |
| 1:2150883:G:T | G261W | 1.000 |
| 1:2150884:G:A | G261E | 1.000 |
| 1:2150884:G:C | G261A | 1.000 |
| 1:2150884:G:T | G261V | 1.000 |
| 1:2150886:A:C | S262R | 1.000 |
| 1:2150888:C:A | S262R | 1.000 |
| 1:2150888:C:G | S262R | 1.000 |
| 1:2150892:G:C | A264P | 1.000 |
| 1:2150893:C:A | A264D | 1.000 |
| 1:2150893:C:T | A264V | 1.000 |
| 1:2150895:A:G | K265E | 1.000 |
| 1:2150897:G:C | K265N | 1.000 |
| 1:2150897:G:T | K265N | 1.000 |
| 1:2150898:G:C | V266L | 1.000 |
| 1:2150899:T:C | V266A | 1.000 |
| 1:2150902:T:C | L267P | 1.000 |
| 1:2150905:T:C | L268P | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000019726 (1:2106661 C>T), RS1000021623 (1:2050282 G>A), RS1000027574 (1:2077208 G>A), RS1000036283 (1:2148636 T>G), RS1000038391 (1:2087920 G>T), RS1000046125 (1:2059501 C>T), RS1000047028 (1:2127904 C>T), RS1000067811 (1:2168297 G>A), RS1000072310 (1:2077388 A>G), RS1000096076 (1:2180374 C>T), RS1000120685 (1:2085495 A>C,G), RS1000122507 (1:2116028 T>C), RS1000141506 (1:2163916 A>T), RS1000177095 (1:2151049 C>T), RS1000207669 (1:2147100 A>G,T)
Disease associations
OMIM: gene MIM:176982 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
99 total (30 of 99 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000028 | Cryptorchidism |
| HP:0000047 | Hypospadias |
| HP:0000055 | Abnormal female external genitalia morphology |
| HP:0000077 | Abnormality of the kidney |
| HP:0000107 | Renal cyst |
| HP:0000126 | Hydronephrosis |
| HP:0000135 | Hypogonadism |
| HP:0000160 | Narrow mouth |
| HP:0000248 | Brachycephaly |
| HP:0000252 | Microcephaly |
| HP:0000270 | Delayed cranial suture closure |
| HP:0000286 | Epicanthus |
| HP:0000307 | Pointed chin |
| HP:0000343 | Long philtrum |
| HP:0000358 | Posteriorly rotated ears |
| HP:0000405 | Conductive hearing impairment |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000431 | Wide nasal bridge |
| HP:0000457 | Depressed nasal ridge |
| HP:0000464 | Abnormality of the neck |
| HP:0000486 | Strabismus |
| HP:0000490 | Deeply set eye |
| HP:0000504 | Abnormality of vision |
| HP:0000505 | Visual impairment |
| HP:0000518 | Cataract |
| HP:0000534 | Abnormal eyebrow morphology |
| HP:0000639 | Nystagmus |
| HP:0000648 | Optic atrophy |
| HP:0000708 | Atypical behavior |
| HP:0000717 | Autism |
GWAS associations
13 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000817_140 | Height | 2.000000e-08 |
| GCST000885_3 | Response to antipsychotic treatment in schizophrenia (reasoning) | 1.000000e-06 |
| GCST005951_34 | Body mass index | 3.000000e-08 |
| GCST005951_35 | Body mass index | 4.000000e-08 |
| GCST007325_194 | General risk tolerance (MTAG) | 2.000000e-08 |
| GCST010696_20 | Cortical thickness (min-P) | 2.000000e-10 |
| GCST010697_42 | Cortical surface area (min-P) | 4.000000e-20 |
| GCST010698_65 | Subcortical volume (min-P) | 2.000000e-17 |
| GCST010699_76 | Brain morphology (min-P) | 3.000000e-17 |
| GCST010700_27 | Cortical thickness (MOSTest) | 7.000000e-44 |
| GCST010701_61 | Cortical surface area (MOSTest) | 1.000000e-14 |
| GCST010702_167 | Subcortical volume (MOSTest) | 4.000000e-18 |
| GCST010703_38 | Brain morphology (MOSTest) | 9.000000e-09 |
EFO canonical traits (5, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004350 | reasoning |
| EFO:0004340 | body mass index |
| EFO:0008579 | risk-taking behaviour |
| EFO:0004346 | neuroimaging measurement |
| EFO:0004840 | cortical thickness |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (3): CHEMBL2093867 (PROTEIN FAMILY), CHEMBL3438 (SINGLE PROTEIN), CHEMBL3885627 (PROTEIN FAMILY)
Molecules with ChEMBL bioactivity
16 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 284,360 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1863513 | INGENOL MEBUTATE | 4 | 1,475 |
| CHEMBL608533 | MIDOSTAURIN | 4 | 7,259 |
| CHEMBL83 | TAMOXIFEN | 4 | 171,635 |
| CHEMBL265502 | SURAMIN | 3 | 36,848 |
| CHEMBL38380 | FASUDIL | 3 | 11,953 |
| CHEMBL428690 | ALVOCIDIB | 3 | 27,781 |
| CHEMBL300138 | ENZASTAURIN | 3 | 3,209 |
| CHEMBL279115 | PHORBOL MYRISTATE ACETATE | 2 | 1,362 |
| CHEMBL28509 | EDELFOSINE | 2 | 10,540 |
| CHEMBL3137336 | UPROSERTIB | 2 | 1,624 |
| CHEMBL574737 | UCN-01 | 2 | 2,217 |
| CHEMBL1967878 | CENISERTIB | 2 | 358 |
| CHEMBL1980715 | LAUROGUADINE | 2 | 294 |
| CHEMBL2107832 | PIMASERTIB | 2 | 3,452 |
| CHEMBL565612 | SOTRASTAURIN | 2 | 1,355 |
| CHEMBL572878 | TOZASERTIB | 2 | 2,998 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Iota subfamily
Most potent curated ligand interactions (3 total), top 3:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| compound 3 [PMID: 19097791] | Inhibition | 8.65 | pIC50 |
| Gö 6983 | Inhibition | 7.22 | pIC50 |
| balanol | Inhibition | 5.23 | pIC50 |
Binding affinities (BindingDB)
78 measured of 107 human assays (108 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| CHEMBL4442196 | IC50 | 0.09 nM | |
| CHEMBL3741746 | IC50 | 0.13 nM | |
| CHEMBL4528495 | IC50 | 0.15 nM | |
| CHEMBL4538431 | IC50 | 0.17 nM | |
| CHEMBL4443190 | IC50 | 0.18 nM | |
| CHEMBL4435580 | IC50 | 0.22 nM | |
| CHEMBL4587471 | IC50 | 0.36 nM | |
| CHEMBL4575056 | EC50 | 0.6 nM | |
| (3R,4R)-3-methoxy-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | IC50 | 3.93 nM | US-10189849: CDK inhibitors |
| indazole-benzimidazole, 3 | IC50 | 4.1 nM | |
| indazole-benzimidazole, 4 | IC50 | 13.3 nM | |
| 2-{[2,6-dihydroxy-4-({[(3R,4R)-4-[(4-hydroxybenzene)amido]pyrrolidin-3-yl]oxy}carbonyl)phenyl]carbonyl}-3-hydroxybenzoic acid | IC50 | 22 nM | |
| 6-{5-[(2S)-2-amino-3-(1H-indol-3-yl)propoxy]pyridin-3-yl}isoquinolin-3-amine | IC50 | 31 nM | |
| 2-{[2,6-dihydroxy-4-({[(1R,2R)-2-[(4-hydroxybenzene)amido]cyclopentyl]oxy}carbonyl)phenyl]carbonyl}-3-hydroxybenzoic acid | IC50 | 40 nM | |
| 2-({2,6-dihydroxy-4-[({3-[(4-hydroxybenzene)amido]bicyclo[2.2.1]heptan-2-yl}oxy)carbonyl]phenyl}carbonyl)-3-hydroxybenzoic acid | IC50 | 55 nM | |
| 2-{[2,6-dihydroxy-4-({[(8R,9R)-9-[(4-hydroxybenzene)amido]tricyclo[5.2.1.0^{2,6}]decan-8-yl]oxy}carbonyl)phenyl]carbonyl}-3-hydroxybenzoic acid | IC50 | 100 nM | |
| indazole-benzimidazole, 1 | IC50 | 102 nM | |
| indazole-benzimidazole, 12 | IC50 | 247 nM | |
| 6-{5-[(2S)-2-amino-3-(1H-indol-3-yl)propoxy]-2-ethynylpyridin-3-yl}isoquinoline | IC50 | 260 nM | |
| 13a (S-) | IC50 | 270 nM | |
| 2-{[2,6-dihydroxy-4-({[(1R,2R)-2-[(4-hydroxybenzene)amido]cycloheptyl]oxy}carbonyl)phenyl]carbonyl}-3-hydroxybenzoic acid | IC50 | 270 nM | |
| 2-({2,6-dihydroxy-4-[({3-[(4-hydroxybenzene)amido]-1,7,7-trimethylbicyclo[2.2.1]heptan-2-yl}oxy)carbonyl]phenyl}carbonyl)-3-hydroxybenzoic acid | IC50 | 410 nM | |
| 2-{[2,6-dihydroxy-4-({[(4S)-3-[(4-hydroxybenzene)amido]-1-azabicyclo[3.2.2]nonan-4-yl]oxy}carbonyl)phenyl]carbonyl}-3-hydroxybenzoic acid | IC50 | 415 nM | |
| 6-{5-[(2S)-2-amino-3-(1H-indol-3-yl)propoxy]-2-chloropyridin-3-yl}isoquinoline | IC50 | 540 nM | |
| ethyl 2-amino-4-[4-(dimethylamino)phenyl]thiophene-3-carboxylate | IC50 | 1000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| indazole-benzimidazole, 9 | IC50 | 1040 nM | |
| indazole-benzimidazole, 24 | IC50 | 1070 nM | |
| 3-[(2S)-2-amino-3-({5-[(E)-2-(pyridin-4-yl)ethenyl]pyridin-3-yl}oxy)propyl]-1H-indole | IC50 | 1200 nM | |
| indazole-benzimidazole, 16 | IC50 | 1310 nM | |
| indazole-benzimidazole, 11 | IC50 | 1730 nM | |
| ethyl 2-amino-4-(4-aminophenyl)thiophene-3-carboxylate | IC50 | 2000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| ethyl 2-amino-4-(1,3-benzodioxol-5-yl)thiophene-3-carboxylate | IC50 | 2000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| 2-{[2,6-dihydroxy-4-({[(8S,9R)-9-[(4-hydroxybenzene)amido]tricyclo[5.2.1.0^{2,6}]decan-8-yl]oxy}carbonyl)phenyl]carbonyl}-3-hydroxybenzoic acid | IC50 | 2700 nM | |
| [2-amino-4-(3,4-dichlorophenyl)thiophen-3-yl]-morpholin-4-ylmethanone | IC50 | 3000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| indazole-benzimidazole, 25 | IC50 | 3020 nM | |
| ethyl 2-amino-4-(2-fluoro-4-methoxyphenyl)thiophene-3-carboxylate | IC50 | 4000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| [2-amino-4-(3,4-dimethoxyphenyl)thiophen-3-yl]-morpholin-4-ylmethanone | IC50 | 4000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| 2-amino-4-(3,4-dimethoxyphenyl)-N-ethylthiophene-3-carboxamide | IC50 | 4000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| (3-methoxyphenyl)methyl 2-amino-4-(3,4-dimethoxyphenyl)thiophene-3-carboxylate | IC50 | 5000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| 2-amino-4-(3,4-dichlorophenyl)-N-propan-2-ylthiophene-3-carboxamide | IC50 | 5000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| 2-amino-4-(3,4-dichlorophenyl)-N-ethylthiophene-3-carboxamide | IC50 | 5000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| 2-{[2,6-dihydroxy-4-({[(3R,4R)-3-[(4-hydroxybenzene)amido]piperidin-4-yl]oxy}carbonyl)phenyl]carbonyl}-3-hydroxybenzoic acid | IC50 | 5100 nM | |
| ethyl 4-(4-acetamidophenyl)-2-aminothiophene-3-carboxylate | IC50 | 6000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| (3-methoxyphenyl)methyl 2-amino-4-(4-carbamoylphenyl)thiophene-3-carboxylate | IC50 | 6000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| benzyl 2-amino-4-(3,4-dimethoxyphenyl)thiophene-3-carboxylate | IC50 | 6000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| indazole-benzimidazole, 10 | IC50 | 6100 nM | |
| 2-amino-4-(3,4-dimethoxyphenyl)thiophene-3-carbonitrile | IC50 | 7000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| (2-fluorophenyl)methyl 2-amino-4-(3,4-dimethoxyphenyl)thiophene-3-carboxylate | IC50 | 7000 nM | US-8889672: Compounds, formulations, and methods of protein kinase C inhibition |
| indazole-benzimidazole, 21 | IC50 | 8930 nM | |
| indazole-benzimidazole, 6 | IC50 | 10000 nM |
ChEMBL bioactivities
506 potent at pChembl≥5 of 677 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.10 | IC50 | 0.08 | nM | STAUROSPORINE |
| 10.05 | IC50 | 0.09 | nM | CHEMBL4442196 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL4635482 |
| 9.89 | IC50 | 0.13 | nM | CHEMBL3741746 |
| 9.85 | IC50 | 0.14 | nM | CHEMBL4575056 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL4528495 |
| 9.77 | IC50 | 0.17 | nM | CHEMBL4538431 |
| 9.74 | IC50 | 0.18 | nM | CHEMBL4443190 |
| 9.72 | EC50 | 0.19 | nM | CHEMBL3741746 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL4636488 |
| 9.66 | IC50 | 0.22 | nM | CHEMBL4435580 |
| 9.44 | IC50 | 0.36 | nM | CHEMBL4587471 |
| 9.30 | IC50 | 0.5 | nM | CHEMBL4646995 |
| 9.26 | EC50 | 0.55 | nM | CHEMBL4587471 |
| 9.22 | EC50 | 0.6 | nM | CHEMBL4575056 |
| 9.22 | IC50 | 0.6 | nM | CHEMBL4644939 |
| 9.22 | IC50 | 0.6 | nM | STAUROSPORINE |
| 9.10 | IC50 | 0.8 | nM | CHEMBL4636337 |
| 9.05 | IC50 | 0.9 | nM | CHEMBL4632523 |
| 9.00 | EC50 | 1 | nM | CHEMBL2393448 |
| 9.00 | EC50 | 1 | nM | CHEMBL2393447 |
| 9.00 | EC50 | 1 | nM | CHEMBL2393431 |
| 9.00 | IC50 | 1 | nM | STAUROSPORINE |
| 8.96 | IC50 | 1.1 | nM | CHEMBL4643553 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL4642166 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL4637452 |
| 8.77 | IC50 | 1.7 | nM | CHEMBL291126 |
| 8.70 | IC50 | 2 | nM | CHEMBL162621 |
| 8.70 | IC50 | 2 | nM | STAUROSPORINE |
| 8.70 | EC50 | 2 | nM | CHEMBL2393450 |
| 8.70 | EC50 | 2 | nM | CHEMBL2393427 |
| 8.66 | IC50 | 2.2 | nM | CHEMBL83790 |
| 8.65 | IC50 | 2.26 | nM | CHEMBL514197 |
| 8.57 | IC50 | 2.7 | nM | STAUROSPORINE |
| 8.52 | IC50 | 3 | nM | STAUROSPORINE |
| 8.52 | EC50 | 3 | nM | CHEMBL200027 |
| 8.52 | EC50 | 3 | nM | CHEMBL2393423 |
| 8.47 | IC50 | 3.4 | nM | CHEMBL4647780 |
| 8.39 | IC50 | 4.1 | nM | UCN-01 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL4643470 |
| 8.30 | IC50 | 5 | nM | CHEMBL538718 |
| 8.29 | IC50 | 5.18 | nM | CHEMBL480391 |
| 8.28 | Ki | 5.3 | nM | BALANOL |
| 8.25 | IC50 | 5.6 | nM | CHEMBL473631 |
| 8.22 | Kd | 6 | nM | CHEMBL27768 |
| 8.22 | IC50 | 6 | nM | STAUROSPORINE |
| 8.19 | IC50 | 6.4 | nM | CHEMBL4641918 |
| 8.19 | IC50 | 6.5 | nM | STAUROSPORINE |
| 8.15 | IC50 | 7 | nM | STAUROSPORINE |
| 8.12 | IC50 | 7.5 | nM | STAUROSPORINE |
PubChem BioAssay actives
327 with measured affinity, of 2581 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,22R,25R)-12-benzoyloxy-10,11,22-trihydroxy-9-(hydroxymethyl)-13,15-dimethyl-4-prop-1-en-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-2-yl]methyl benzoate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0001 | uM |
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,22R,25R)-22-acetyloxy-12-benzoyloxy-10,11-dihydroxy-9-(hydroxymethyl)-13,15-dimethyl-4-prop-1-en-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-2-yl]methyl benzoate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0001 | uM |
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,22R,25R)-2-(benzoyloxymethyl)-10,11,22-trihydroxy-9-(hydroxymethyl)-13,15-dimethyl-4-prop-1-en-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-12-yl] naphthalene-2-carboxylate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0001 | uM |
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,25R)-12-benzoyloxy-10,11-dihydroxy-9-(hydroxymethyl)-13,15-dimethyl-22-oxo-4-prop-1-en-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-2-yl]methyl benzoate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0001 | uM |
| 7-(4-amino-2-fluorophenyl)-N-[(3S)-azepan-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0001 | uM |
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 165147: Inhibition Protein kinase C (PKC) | ic50 | 0.0001 | uM |
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,22R,25R)-2-(benzoyloxymethyl)-10,11,22-trihydroxy-9-(hydroxymethyl)-13,15-dimethyl-4-prop-1-en-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-12-yl] 4-nitrobenzoate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0002 | uM |
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,22R,25R)-12-benzoyloxy-10,11,22-trihydroxy-9-(hydroxymethyl)-13,15-dimethyl-4-propan-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-2-yl]methyl benzoate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0002 | uM |
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,22R,25R)-2-(benzoyloxymethyl)-10,11,22-trihydroxy-9-(hydroxymethyl)-13,15-dimethyl-4-prop-1-en-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-12-yl] 4-methoxybenzoate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0002 | uM |
| 7-phenyl-N-[(3S)-piperidin-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0002 | uM |
| [(1R,2S,4R,5R,6S,7S,9R,10S,11S,12S,13S,14S,15R,22R,25R)-2-(benzoyloxymethyl)-10,11,22-trihydroxy-9-(hydroxymethyl)-13,15-dimethyl-4-prop-1-en-2-yl-8,24,26,27-tetraoxaheptacyclo[12.10.1.14,23.15,23.01,6.07,9.011,25]heptacosan-12-yl] pyridine-4-carboxylate | 1576882: Agonist activity at Protein kinase C in human MT4 cells infected with HIV-1 NL4-3 assessed as inhibition of viral replication measured on day 3 post-infection by Nano-Glo luciferase assay | ic50 | 0.0004 | uM |
| 7-(4-aminophenyl)-N-piperidin-3-ylisoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0005 | uM |
| 4-[5-(piperidin-3-ylamino)isoquinolin-7-yl]phenol | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0006 | uM |
| 7-(4-amino-2,3-difluorophenyl)-N-[(3S)-azepan-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0008 | uM |
| 7-(6-amino-3-pyridinyl)-N-[(3S)-azepan-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0009 | uM |
| ethyl 2-amino-4-(4-aminophenyl)thiophene-3-carboxylate | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0010 | uM |
| ethyl 2-amino-4-[4-(dimethylamino)phenyl]thiophene-3-carboxylate | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0010 | uM |
| (3-methoxyphenyl)methyl 2-amino-4-(3,4-dimethoxyphenyl)thiophene-3-carboxylate | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0010 | uM |
| 7-(6-amino-2-fluoro-3-pyridinyl)-N-[(3S)-azepan-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0011 | uM |
| 7-(4-amino-2,5-difluorophenyl)-N-[(3S)-azepan-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0014 | uM |
| 7-(4-aminophenyl)-N-[(3S)-azepan-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0014 | uM |
| (15R,16R,18S)-16-(hydroxymethyl)-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaene-3,5-dione | 155717: In vitro inhibition of protein kinase C (PKC) | ic50 | 0.0017 | uM |
| ethyl 2-amino-4-(1,3-benzodioxol-5-yl)thiophene-3-carboxylate | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0020 | uM |
| benzyl 2-amino-4-(3,4-dimethoxyphenyl)thiophene-3-carboxylate | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0020 | uM |
| 2-methoxy-4-[3-[4-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl]phenol | 1799297: PKC Enzyme Assay from Article 10.1016/j.bmcl.2008.11.105: “2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: design and synthesis of a potent and isoform selective PKC-zeta inhibitor.” | ic50 | 0.0023 | uM |
| propan-2-yl 2-amino-4-(3,4-dimethoxyphenyl)thiophene-3-carboxylate | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0030 | uM |
| [4-[[4-(1-benzothiophen-2-yl)pyrimidin-2-yl]amino]phenyl]-(4-pyrrolidin-1-ylpiperidin-1-yl)methanone | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0030 | uM |
| 7-(6-amino-4-fluoro-3-pyridinyl)-N-[(3S)-azepan-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0034 | uM |
| N’-(7-phenylisoquinolin-5-yl)ethane-1,2-diamine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0041 | uM |
| 4-[3-[4-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl]aniline | 1799297: PKC Enzyme Assay from Article 10.1016/j.bmcl.2008.11.105: “2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: design and synthesis of a potent and isoform selective PKC-zeta inhibitor.” | ic50 | 0.0052 | uM |
| 2-[2,6-dihydroxy-4-[(3R,4R)-3-[(4-hydroxybenzoyl)amino]azepan-4-yl]oxycarbonylbenzoyl]-3-hydroxybenzoic acid | 254306: Inhibitory constant against protein kinase C | ki | 0.0053 | uM |
| 4-[3-[4-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl]phenol | 1799297: PKC Enzyme Assay from Article 10.1016/j.bmcl.2008.11.105: “2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: design and synthesis of a potent and isoform selective PKC-zeta inhibitor.” | ic50 | 0.0056 | uM |
| [(1S,2S,6R,10S,11R,13S,14R,15R)-13-butanoyloxy-1,6-dihydroxy-8-(hydroxymethyl)-4,12,12,15-tetramethyl-5-oxo-14-tetracyclo[8.5.0.02,6.011,13]pentadeca-3,8-dienyl] butanoate | 2150891: Binding affinity to PKC (unknown origin) assessed as dissociation constant | kd | 0.0060 | uM |
| 7-phenyl-N-piperidin-3-ylisoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0064 | uM |
| [(1S,2S,6R,10S,11R,13S,14R,15R)-13-acetyloxy-1,6-dihydroxy-8-(hydroxymethyl)-4,12,12,15-tetramethyl-5-oxo-14-tetracyclo[8.5.0.02,6.011,13]pentadeca-3,8-dienyl] tetradecanoate | 1459482: Activation of PKC in human platelet assessed as induction of platelet aggregation measured within 15 mins by tribidimetric method | ec50 | 0.0095 | uM |
| N-[(3S)-azepan-3-yl]-7-phenylisoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0097 | uM |
| 1-(6-methoxy-2,3-dihydro-1H-isoindol-5-yl)-6-(1H-pyrrolo[2,3-b]pyridin-4-yl)benzimidazole | 1375387: Inhibition of full-length N-terminal GST-fused human PKC-zeta expressed in baculovirus expression system using (5FAM) RFARKGSLRQKNV as substrate after 60 mins by caliper assay | ic50 | 0.0100 | uM |
| ethyl 2-amino-4-(2-fluoro-4-methoxyphenyl)thiophene-3-carboxylate | 752123: Inhibition of atypical PKCzeta in HEK293 cells assessed as TNF-induced NFkappaB activation incubated for 3 hrs prior to TNF induction measured after 5 hrs by bright-glo luciferase reporter gene assay | ec50 | 0.0100 | uM |
| 4-piperazin-1-yl-2-pyridin-4-yl-5,6,7,8-tetrahydro-[1]benzothiolo[2,3-d]pyrimidine | 1662458: Inhibition of recombinant full-length human aPKCzeta expressed in Sf21 insect cells using 5FAM-ERMRPRKRQGSVRRRV-NH2 as substrate in presence of ATP after 60 mins by IMAP fluorescence polarization analysis | ic50 | 0.0120 | uM |
| N-[4-[5-(piperidin-3-ylamino)isoquinolin-7-yl]phenyl]acetamide | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0130 | uM |
| 6-[(3S)-pyrrolidin-3-yl]oxy-4-(1H-pyrrolo[2,3-b]pyridin-5-yl)isoquinoline | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0130 | uM |
| N-[(3S)-azepan-3-yl]-7-(2,6-difluorophenyl)isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0152 | uM |
| 5-chloro-4-(4-chloro-1-methylpyrazol-5-yl)-N-[(3S,4S,6S)-4-(3,4-difluorophenyl)-6-(2-hydroxyethyl)piperidin-3-yl]furan-2-carboxamide | 1608042: Inhibition of PKC (unknown origin) | ic50 | 0.0160 | uM |
| 3-methoxy-4-[3-[4-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl]phenol | 1799297: PKC Enzyme Assay from Article 10.1016/j.bmcl.2008.11.105: “2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: design and synthesis of a potent and isoform selective PKC-zeta inhibitor.” | ic50 | 0.0220 | uM |
| 3-methoxy-4-[3-[4-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl]aniline | 1799297: PKC Enzyme Assay from Article 10.1016/j.bmcl.2008.11.105: “2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: design and synthesis of a potent and isoform selective PKC-zeta inhibitor.” | ic50 | 0.0233 | uM |
| (2S,5S)-9-decyl-5-(hydroxymethyl)-1-methyl-2-propan-2-yl-2,4,5,6-tetrahydro-1,4-benzodiazocin-3-one | 2163933: Activation of PKC in human ACH-2 cells infected with latent HIV-1 assessed as reversal of HIV-1 latency by measuring increase in p24 antigen level incubated for 48 hrs by chemiluminescent enzyme immunoassay | ec50 | 0.0250 | uM |
| 4-[6-[(3S)-pyrrolidin-3-yl]oxyisoquinolin-4-yl]aniline | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0330 | uM |
| 4-[[[6-methoxy-4-methyl-5-[3-(trifluoromethyl)phenoxy]quinolin-8-yl]amino]methyl]phenol | 1180278: Inhibition of PKC (unknown origin) using C1 peptide substrate | ic50 | 0.0350 | uM |
| 7-phenyl-N-[(3R)-piperidin-3-yl]isoquinolin-5-amine | 1658843: Inhibition of recombinant human PKCzeta using biotin-KKKKRFSFKKSFK substrate and ATP incubated for 30 mins by TR-FRET method | ic50 | 0.0350 | uM |
| N-[(1R,2S)-2-aminocyclohexyl]-4-[6-(1-methylpyrazol-4-yl)pyrazolo[1,5-a]pyrimidin-3-yl]thiophene-2-carboxamide | 1637128: Inhibition of full-length recombinant human PRKCZ expressed in baculovirus expression system by Z’-LYTE assay | ic50 | 0.0400 | uM |
CTD chemical–gene interactions
64 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Aflatoxin B1 | affects expression, decreases expression, increases methylation | 4 |
| Benzo(a)pyrene | affects methylation, decreases expression | 3 |
| Valproic Acid | increases expression, increases methylation, affects expression | 3 |
| sodium arsenite | decreases expression, increases expression | 2 |
| 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one | affects localization, decreases phosphorylation | 2 |
| Tetradecanoylphorbol Acetate | affects localization, increases expression | 2 |
| Cyclosporine | increases expression, decreases methylation | 2 |
| Cadmium Chloride | decreases expression, increases expression | 2 |
| triphenyl phosphate | affects expression | 1 |
| pirinixic acid | decreases expression, increases activity, affects binding | 1 |
| bisphenol A | increases methylation, decreases methylation, affects cotreatment | 1 |
| 2,2’-methylenebis(4-methyl-6-tert-butylphenol) | affects expression, affects response to substance | 1 |
| trichostatin A | affects expression, decreases reaction | 1 |
| mono-(2-ethylhexyl)phthalate | increases abundance, increases methylation | 1 |
| afimoxifene | decreases response to substance | 1 |
| 11-nor-delta(9)-tetrahydrocannabinol-9-carboxylic acid | affects methylation, increases abundance | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| benzo(e)pyrene | decreases methylation | 1 |
| aflatoxin B2 | increases methylation | 1 |
| dibenzo(a,l)pyrene | decreases expression | 1 |
| beta-methylcholine | affects expression | 1 |
| phenethyl isothiocyanate | decreases expression, decreases phosphorylation | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| K 7174 | increases expression | 1 |
| 2,2’,4,4’,5-brominated diphenyl ether | affects localization | 1 |
| (N)-methanocarba-2MeSADP | decreases reaction, increases activity, increases phosphorylation | 1 |
| bisphenol S | decreases methylation | 1 |
| jinfukang | increases expression, increases reaction | 1 |
| PF 3758309 | increases expression | 1 |
| Temozolomide | increases expression | 1 |
ChEMBL screening assays
638 unique, capped per target: 626 binding, 10 functional, 2 admet
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1000235 | Binding | Activation of PKC in PMA-stimulated human LNCAP cells assessed as ERK phosphorylation at 1 nM to 10 uM by Western blot relative to PMA | Conformationally constrained analogues of diacylglycerol (DAG). 31. Modulation of the biological properties of diacylgycerol lactones (DAG-lactones) containing rigid-rod acyl groups separated from the core lactone by spacer units of different lengths. — J Med Chem |
| CHEMBL688555 | Functional | Retained protein kinase C activity in the presence of 1.25 uM compound | Synthesis and biological activity of novel quaternary ammonium derivatives of alkylglycerols as potent inhibitors of protein kinase C. — J Med Chem |
| CHEMBL4407592 | ADMET | Inhibition of recombinant human full-length untagged PRKCZ expressed in baculovirus expression system at 25 uM using FRET-labeled Ser/Thr 07 peptide as substrate measured after 1 hr by Z’-lyte assay relative to control | Optimization and Mechanistic Characterization of Pyridopyrimidine Inhibitors of Bacterial Biotin Carboxylase. — J Med Chem |
Cellosaurus cell lines
9 cell lines: 6 cancer cell line, 3 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B3EX | Abcam HEK293T PRKCZ KO 1 | Transformed cell line | Female |
| CVCL_B3EY | Abcam HEK293T PRKCZ KO 2 | Transformed cell line | Female |
| CVCL_D7YL | Ubigene A-549 PRKCZ KO | Cancer cell line | Male |
| CVCL_D8U0 | Ubigene HCT 116 PRKCZ KO | Cancer cell line | Male |
| CVCL_D9PQ | Ubigene HEK293 PRKCZ KO | Transformed cell line | Female |
| CVCL_E0LY | Ubigene HeLa PRKCZ KO | Cancer cell line | Female |
| CVCL_TG93 | HAP1 PRKCZ (-) 1 | Cancer cell line | Male |
| CVCL_TG94 | HAP1 PRKCZ (-) 2 | Cancer cell line | Male |
| CVCL_TG95 | HAP1 PRKCZ (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.