PRL

gene
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Also known as pPRL

Summary

PRL (prolactin, HGNC:9445) is a protein-coding gene on chromosome 6p22.3, encoding Prolactin (P01236). Prolactin acts primarily on the mammary gland by promoting lactation.

This gene encodes the anterior pituitary hormone prolactin. This secreted hormone is a growth regulator for many tissues, including cells of the immune system. It may also play a role in cell survival by suppressing apoptosis, and it is essential for lactation. Alternative splicing results in multiple transcript variants that encode the same protein.

Source: NCBI Gene 5617 — RefSeq curated summary.

At a glance

  • GWAS associations: 8
  • Clinical variants (ClinVar): 36 total
  • MANE Select transcript: NM_000948

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:9445
Approved symbolPRL
Nameprolactin
Location6p22.3
Locus typegene with protein product
StatusApproved
AliasespPRL
Ensembl geneENSG00000172179
Ensembl biotypeprotein_coding
OMIM176760
Entrez5617

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 protein_coding

ENST00000306482, ENST00000617911, ENST00000651245, ENST00000651757

RefSeq mRNA: 2 — MANE Select: NM_000948 NM_000948, NM_001163558

CCDS: CCDS4548

Canonical transcript exons

ENST00000306482 — 5 exons

ExonStartEnd
ENSE000011483902228724622287593
ENSE000011743592229017422290353
ENSE000011743682229253822292645
ENSE000011743812229440922294584
ENSE000038431482229695522297036

Expression profiles

Bgee: expression breadth ubiquitous, 160 present calls, max score 99.96.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 189.9093 / max 145465.3922, expressed in 97 samples.

FANTOM5 promoters (12 alternative TSS)

Promoter IDTPM avgSamples expressed
72137187.866819
721290.836013
721310.32653
721330.208214
721340.202324
721320.11923
721350.099930
721400.093015
721390.085919
721300.05253

Top tissues by expression

288 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
pituitary glandUBERON:000000799.96gold quality
adenohypophysisUBERON:000219699.84gold quality
deciduaUBERON:000245099.20gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099191.00gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047387.52gold quality
placentaUBERON:000198779.41gold quality
stromal cell of endometriumCL:000225578.35gold quality
lower esophagus mucosaUBERON:003583476.55gold quality
right hemisphere of cerebellumUBERON:001489072.11gold quality
mucosa of stomachUBERON:000119971.71gold quality
secondary oocyteCL:000065571.43silver quality
body of uterusUBERON:000985369.89gold quality
mucosa of transverse colonUBERON:000499169.12gold quality
right coronary arteryUBERON:000162568.94gold quality
tibialis anteriorUBERON:000138568.68silver quality
omental fat padUBERON:001041468.21gold quality
peritoneumUBERON:000235868.14gold quality
adipose tissue of abdominal regionUBERON:000780866.74gold quality
right testisUBERON:000453465.74gold quality
descending thoracic aortaUBERON:000234565.44gold quality
left testisUBERON:000453364.34gold quality
myometriumUBERON:000129664.24gold quality
diaphragmUBERON:000110363.01gold quality
thymusUBERON:000237062.95silver quality
testisUBERON:000047362.24gold quality
embryoUBERON:000092262.14gold quality
right frontal lobeUBERON:000281062.07gold quality
hair follicleUBERON:000207361.72gold quality
hindlimb stylopod muscleUBERON:000425261.45gold quality
ileal mucosaUBERON:000033161.31silver quality

Single-cell (SCXA)

Detected in 3 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-HCAD-23yes6804.08
E-HCAD-24yes3880.91
E-ANND-3no2.44

Regulation

Is transcription factor: yes

Downstream targets (CollecTRI)

4 targets.

TargetRegulation
KRT14Activation
KRT15Activation
KRT19Activation
KRT5Activation

Upstream regulators (CollecTRI, top): AHR, ALX1, AP1, AR, BMAL1, CEBPA, CEBPB, CEBPD, CEBPG, CLOCK, CREB1, CREM, DDIT3, DNMT1, EGR3, ELK1, ELK3, ERF, ESR1, ESR2, ETS1, ETS2, ETV7, EZH2, FOXC1, FOXN1, FOXO1, GABPA, GLI3, HDAC9, HLTF, HOXA10, HOXA11, HOXB7, IKZF1, IRF1, JUN, JUNB, KAT5, KLF12

miRNA regulators (miRDB)

13 targeting PRL, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-4760-5P99.8069.881619
HSA-MIR-806199.6369.441411
HSA-MIR-432899.5771.064094
HSA-MIR-593-3P99.2267.281327
HSA-MIR-320A-5P98.8866.751248
HSA-MIR-6895-3P98.7965.69996
HSA-MIR-6818-3P98.5668.231307
HSA-MIR-452197.7367.64684
HSA-MIR-432797.2167.71676
HSA-MIR-490-5P96.7565.81661
HSA-MIR-433095.4466.39993
HSA-MIR-659-5P95.3665.00300
HSA-MIR-6816-3P95.0566.08459

Literature-anchored findings (GeneRIF, showing 40)

  • Prolactin expressed as a hexahistidine-tagged fusion protein is active in a rat Nb2 lymphoma cell proliferation bioassay and when purified can substitute for pituitary-derived prolactin. (PMID:11437600)
  • review: the regulation of prolactin secretion, the clinical features and causes of hyperprolactinemia, and the use of dopamine agonists (PMID:11721691)
  • Review: evidence demonstrating PRL synthesis by different subtypes of immune cells from humans, mice and rats, describe the regulation of PRL gene expression in human lymphocytes, and discuss the functions of PRL made by immune cells. (PMID:11721692)
  • Review: Polymorphisms of the human prolactin gene–implications for production of lymphocyte prolactin and systemic lupus erythematosus (PMID:11721693)
  • Review: proliferative actions of PRL and its survival promoting properties in immune cells (PMID:11721694)
  • Review: Stimulation of interferon regulatory factor-1 by prolactin (PMID:11721695)
  • Review: Effects of prolactin on hematopoiesis (PMID:11721696)
  • Review: Effects of prolactin on signal transduction and gene expression: possible relevance for systemic lupus erythematosus. (PMID:11721698)
  • Review: Effect of prolactin on the antigen presenting function of monocyte-derived dendritic cells (PMID:11721699)
  • Review: evidence has accumulated to support the hypothesis that both mild and moderate elevations of serum prolactin participate in the clinical expression and pathogenesis of systemic lupus erythematosus (PMID:11721702)
  • Review: Analysis of anti-prolactin autoantibodies in systemic lupus erythematosus (PMID:11721703)
  • cyclin D1 may be a target gene for PRL in normal lobuloalveolar development, as well as in the development and/or progression of mammary cancer. (PMID:11923474)
  • results presented are consistent with a role of the PRL-PRLR system in bone/cartilage formation/repair processes (PMID:11997178)
  • a direct inhibition of PRL on tumour cell growth, while its reciprocal effect on apoptosis refers to an important regulatory role of PRL (PMID:12036601)
  • study provides evidence that cortisol, prolactin and growth hormone respond to psychological stress in humans (PMID:12445833)
  • transcriptional activity of prolactin promoter in GH3 cells co-transfected with menin was significantly decreased (PMID:12459032)
  • expression and transcription in mammary cells (PMID:12485910)
  • human ovarian follicular cells are an extrapituitary site of prolactin gene expression (PMID:12524085)
  • To evaluate a possible role of prolactin genes in SLE & MS formed an association study of 19 PRL SNPs was done. No statistically significant difference in the prolactin receptor allele distribution was observed for any of the tested variations. (PMID:12559630)
  • human T-lymphocytes are targets for PRL. (PMID:12668883)
  • results demonstrate a direct effect of prolactin, via functional prolactin receptors, in reducing the lipoprotein lipase activity in human adipose tissue (PMID:12679477)
  • serum leptin and prolactin levels does not seem to be related with angiogenic activity and metastasis in breast cancer patients. (PMID:12687277)
  • backbone dynamics were investigated by analysis of 15N NMR relaxation phenomena and demonstrated a rigid four-helical bundle with relatively mobile interconnecting loops (PMID:12729745)
  • K+ channel modulation by PRL, via the p59fyn pathway, is the primary ionic event in PRL signal transduction, triggering proliferation of androgen-sensitive prostate cancer cells. (PMID:14565846)
  • The N-terminus of prolactin modulates its biological properties. (PMID:14580717)
  • Prolactin may contribute significantly to early corpus luteum formation and survival by acting as a potent antiapoptotic factor for human granulosa cells (PMID:14645190)
  • Human prolactin-G129R-induced breast cancer cell and/or mammary gland apoptosis which is mediated, at least in part, through the regulation of Bax and Bcl-2 gene expression. (PMID:14647416)
  • differential changes in nocturnal prolactin secretion among HIV-infected men occurred while maintaining the normal coordinate feedback and/or feedforward control within the lactotropic axis (PMID:14984591)
  • Endogenous prolactin induces estrogen receptor alpha and prolactin receptor expression and increases estrogen responsiveness in breast neoplasms. (PMID:15026085)
  • the smad pathway and the tumor suppressor menin are key regulators of activin effects on PRL and Pit-1 expression, as well as on cell growth inhibition (PMID:15031321)
  • PRL fragments are potentially physiological antiangiogenic inhibitors of tumor growth. (PMID:15192082)
  • lack of endometrial PRL expression is involved in reproduction failure. (PMID:15218000)
  • Data support an “induced-fit” model for prolactin receptor binding where binding of the first receptor to human prolactin induces a conformation change in the hormone creating the second receptor-binding site. (PMID:15504038)
  • Prolactin and heregulin override DNA damage-induced growth arrest and promote PI-3 kinase-dependent proliferation in breast cancer cells (PMID:15645137)
  • PRL takes part in the trigger of T-cell activation, and is produced and secreted by the same cells acting predominantly in autocrine form, collaborating in the expression of CD69 and CD154, and the secretion of IL-2 and INF-gamma. (PMID:15993365)
  • solution structure and prolactin-prolactin receptor interaction (PMID:16045928)
  • prolactin binding initiates limited proteasomal cleavage of its receptor, generating a cell-associated fragment containing the extracellular domain; findings described new potential mediator of prolactin action (PMID:16103113)
  • Data suggest that the expression of Pit-1 in cells of the alpha SU-based gonadotropin cell lineage might also lead to the expression of growth hormone, prolactin, and thyroid-stimulating hormone beta subunit. (PMID:16133148)
  • Review. The regulation of PRL gene expression in human lymphocytes & the functions of PRL made by the immune cells, including its involvement in autoimmunity, are reviewed. (PMID:16187706)
  • cAMP induces PRL expression in T lymphocytes via cooperation of at least two different signaling pathways (PMID:16378242)

Cross-species orthologs

55 orthologs

OrganismSymbolGene ID
danio_rerioprlENSDARG00000037946
mus_musculusPrl4a1ENSMUSG00000005891
mus_musculusPrl7a1ENSMUSG00000006488
mus_musculusPrl8a9ENSMUSG00000006490
mus_musculusPrl5a1ENSMUSG00000017064
mus_musculusPrl3c1ENSMUSG00000017922
mus_musculusPrl8a2ENSMUSG00000018259
mus_musculusPrl8a1ENSMUSG00000019756
mus_musculusPrlENSMUSG00000021342
mus_musculusPrl8a6ENSMUSG00000021345
mus_musculusPrl8a8ENSMUSG00000021346
mus_musculusPrl7b1ENSMUSG00000021347
mus_musculusPrl7d1ENSMUSG00000021348
mus_musculusPrl2a1ENSMUSG00000022886
mus_musculusPrl3a1ENSMUSG00000038883
mus_musculusPrl3b1ENSMUSG00000038891
mus_musculusPrl7a2ENSMUSG00000046899
mus_musculusPrl2c5ENSMUSG00000055360
mus_musculusPrl2c3ENSMUSG00000056457
mus_musculusPrl3d1ENSMUSG00000057170
mus_musculusPrl7c1ENSMUSG00000060738
mus_musculusPrl3d3ENSMUSG00000062201
mus_musculusPrl2c1ENSMUSG00000062551
mus_musculusPrl3d2ENSMUSG00000062737
mus_musculusPrl2b1ENSMUSG00000069258
mus_musculusPrl6a1ENSMUSG00000069259
mus_musculusPrl2c2ENSMUSG00000079092
rattus_norvegicusPrl5a1ENSRNOG00000016307
rattus_norvegicusPrl4a1ENSRNOG00000016436
rattus_norvegicusPrl2a1ENSRNOG00000016463
rattus_norvegicusPrl7d1ENSRNOG00000016510
rattus_norvegicusPrl7a3ENSRNOG00000016616
rattus_norvegicusPrl7b1ENSRNOG00000016742
rattus_norvegicusPrl3d4ENSRNOG00000016792
rattus_norvegicusPrl8a7ENSRNOG00000016933
rattus_norvegicusPrl2b1ENSRNOG00000017007
rattus_norvegicusPrl8a2ENSRNOG00000017048
rattus_norvegicusPrl6a1ENSRNOG00000017089
rattus_norvegicusPrl3a1ENSRNOG00000017103
rattus_norvegicusPrl3b1ENSRNOG00000017185
rattus_norvegicusPrl3c1ENSRNOG00000017203
rattus_norvegicusPrlENSRNOG00000017374
rattus_norvegicusPrl8a9ENSRNOG00000024843
rattus_norvegicusPrl7a4ENSRNOG00000029126
rattus_norvegicusPrl2c1ENSRNOG00000039058
rattus_norvegicusPrl5a2ENSRNOG00000039075
rattus_norvegicusPrl8a5ENSRNOG00000043237
rattus_norvegicusPrl7c1ENSRNOG00000047649
rattus_norvegicusPrl7a1l-ps1ENSRNOG00000069612
rattus_norvegicusRpl-1ENSRNOG00000074382
rattus_norvegicusENSRNOG00000080461
rattus_norvegicusENSRNOG00000080988
rattus_norvegicusENSRNOG00000082513
rattus_norvegicusPrl8a4ENSRNOG00000089768
rattus_norvegicusENSRNOG00000091360

Paralogs (5): GH2 (ENSG00000136487), CSH1 (ENSG00000136488), CSHL1 (ENSG00000204414), CSH2 (ENSG00000213218), GH1 (ENSG00000259384)

Protein

Protein identifiers

ProlactinP01236 (reviewed: P01236)

All UniProt accessions (5): P01236, A0A494C0Z0, A0A494C1P2, Q5I0G2, Q5THQ0

UniProt curated annotations — full annotation on UniProt →

Function. Prolactin acts primarily on the mammary gland by promoting lactation.

Subunit / interactions. Interacts with PRLR.

Subcellular location. Secreted.

Similarity. Belongs to the somatotropin/prolactin family.

RefSeq proteins (2): NP_000939, NP_001157030 (=MANE)

Domains & families (InterPro)

IDNameType
IPR001400Somatotropin/ProlactinFamily
IPR0090794_helix_cytokine-like_coreHomologous_superfamily
IPR018116Somatotropin_CSConserved_site

Pfam: PF00103

UniProt features (33 total): sequence conflict 8, helix 8, modified residue 5, disulfide bond 3, strand 3, turn 2, signal peptide 1, chain 1, mutagenesis site 1, glycosylation site 1

Structure

Experimental structures (PDB)

12 structures.

PDBMethodResolution (Å)
3N06X-RAY DIFFRACTION2
3NCEX-RAY DIFFRACTION2
3MZGX-RAY DIFFRACTION2.1
3N0PX-RAY DIFFRACTION2.1
3NCBX-RAY DIFFRACTION2.1
3D48X-RAY DIFFRACTION2.5
3NCCX-RAY DIFFRACTION2.5
2Q98X-RAY DIFFRACTION2.7
3NCFX-RAY DIFFRACTION2.8
3NPZX-RAY DIFFRACTION3.35
3EW3X-RAY DIFFRACTION3.8
1RW5SOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P01236-F186.380.69

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (5): 54, 62, 118, 163, 194

Disulfide bonds (3): 219–227, 32–39, 86–202

Glycosylation sites (1): 59

Mutagenesis-validated functional residues (1):

PositionPhenotype
157inhibits signaling via prlr; mutant prl acts as a prlr antagonist.

Function

Pathways and Gene Ontology

Reactome pathways

4 pathways

IDPathway
R-HSA-1170546Prolactin receptor signaling
R-HSA-977225Amyloid fiber formation
R-HSA-982772Growth hormone receptor signaling
R-HSA-9927426Developmental Lineage of Mammary Gland Alveolar Cells

MSigDB gene sets: 187 (showing top): GOBP_NEGATIVE_REGULATION_OF_EPITHELIAL_CELL_PROLIFERATION, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_RESPONSE_TO_PEPTIDE, ENK_UV_RESPONSE_KERATINOCYTE_UP, GOBP_CANONICAL_NF_KAPPAB_SIGNAL_TRANSDUCTION, LHX3_01, PID_REG_GR_PATHWAY, GOBP_CELL_SURFACE_RECEPTOR_SIGNALING_PATHWAY_VIA_JAK_STAT, CHX10_01, AACWWCAANK_UNKNOWN, VART_KSHV_INFECTION_ANGIOGENIC_MARKERS_UP, GOBP_HORMONE_MEDIATED_SIGNALING_PATHWAY, GOBP_NEGATIVE_REGULATION_OF_MULTICELLULAR_ORGANISMAL_PROCESS, GOBP_CELLULAR_RESPONSE_TO_HORMONE_STIMULUS, BLALOCK_ALZHEIMERS_DISEASE_UP

GO Biological Process (13): negative regulation of endothelial cell proliferation (GO:0001937), cell surface receptor signaling pathway (GO:0007166), female pregnancy (GO:0007565), lactation (GO:0007595), negative regulation of angiogenesis (GO:0016525), mammary gland development (GO:0030879), response to nutrient levels (GO:0031667), prolactin signaling pathway (GO:0038161), positive regulation of canonical NF-kappaB signal transduction (GO:0043123), positive regulation of receptor signaling pathway via JAK-STAT (GO:0046427), positive regulation of miRNA transcription (GO:1902895), positive regulation of lactation (GO:1903489), signal transduction (GO:0007165)

GO Molecular Function (4): prolactin receptor binding (GO:0005148), hormone activity (GO:0005179), protein binding (GO:0005515), metal ion binding (GO:0046872)

GO Cellular Component (4): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), endosome lumen (GO:0031904), vesicle (GO:0031982)

Reactome top-level categories

Rollup of top-3 pathways:

CategoryPathways
Cytokine Signaling in Immune system2
Metabolism of proteins1
Developmental Lineages of the Mammary Gland1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
endothelial cell proliferation1
regulation of endothelial cell proliferation1
negative regulation of epithelial cell proliferation1
signal transduction1
multi-organism reproductive process1
multi-multicellular organism process1
body fluid secretion1
mammary gland development1
milk ejection reflex1
angiogenesis1
regulation of angiogenesis1
negative regulation of blood vessel morphogenesis1
gland development1
response to stimulus1
hormone-mediated signaling pathway1
cytokine-mediated signaling pathway1
canonical NF-kappaB signal transduction1
regulation of canonical NF-kappaB signal transduction1
positive regulation of intracellular signal transduction1
cell surface receptor signaling pathway via JAK-STAT1
regulation of receptor signaling pathway via JAK-STAT1
positive regulation of receptor signaling pathway via STAT1
positive regulation of DNA-templated transcription1
miRNA transcription1
regulation of miRNA transcription1
positive regulation of miRNA metabolic process1
lactation1
positive regulation of secretion1
positive regulation of developmental process1
positive regulation of multicellular organismal process1
regulation of lactation1
cell communication1
cellular process1
signaling1
regulation of cellular process1
cellular response to stimulus1
cytokine receptor binding1
receptor ligand activity1
binding1
cation binding1

Protein interactions and networks

STRING

2936 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
PRLPRLRP16471999
PRLPOMCP01189959
PRLTRHP20396951
PRLINSP01308941
PRLGHRP10912920
PRLOXTP01178900
PRLPOU1F1P28069899
PRLGNRH1P01148896
PRLIGF1P01343889
PRLGHRHP01286884
PRLCSN2P05814881
PRLIGF2P01344880
PRLA6NFB4A6NFB4875
PRLPROP1O75360869
PRLJAK2O60674868

IntAct

12 interactions, top by confidence:

ABTypeScore
PRLRPRLpsi-mi:“MI:0407”(direct interaction)0.610
PRLPRLRpsi-mi:“MI:0915”(physical association)0.610
PRLRPRLpsi-mi:“MI:0407”(direct interaction)0.560
PRLMEOX2psi-mi:“MI:0915”(physical association)0.560
BMP1PRLpsi-mi:“MI:0915”(physical association)0.400
PRLHLA-DQB2psi-mi:“MI:0915”(physical association)0.400
PRLMEOX2psi-mi:“MI:0915”(physical association)0.000

BioGRID (9): HLA-DQB2 (Affinity Capture-MS), HLA-DQB2 (Affinity Capture-MS), PRL (Two-hybrid), PPIB (Affinity Capture-Western), PPIB (Reconstituted Complex), PPIB (Two-hybrid), PRL (Two-hybrid), S100P (Reconstituted Complex), S100A6 (Reconstituted Complex)

ESM2 similar proteins: O62781, O62819, O73847, P01236, P01237, P01238, P01239, P01240, P01241, P01242, P06879, P09321, P09586, P0DML2, P0DML3, P10765, P11228, P12420, P14059, P14676, P17572, P18121, P22077, P22393, P29234, P33089, P33090, P33091, P33093, P37884, P43001, P46403, P55151, P55751, P55752, P55753, P55754, P58343, P58756, P58757

Diamond homologs: O35256, O35257, O54830, O62781, O62819, O93566, P01236, P01237, P01238, P01239, P01240, P04095, P04768, P04769, P05402, P06879, P09318, P09319, P09320, P09321, P09584, P09585, P09586, P09611, P10765, P12401, P12402, P12420, P14059, P14676, P16038, P17572, P18121, P18917, P19159, P20362, P21993, P22393, P24800, P29234

SIGNOR signaling

8 interactions.

AEffectBMechanism
PAK2up-regulatesPRLphosphorylation
PRL“down-regulates activity”LPL
PRL“up-regulates quantity by expression”KRT14“transcriptional regulation”
PRL“up-regulates quantity by expression”KRT5“transcriptional regulation”
PRL“up-regulates quantity by expression”KRT15“transcriptional regulation”
PRL“up-regulates quantity by expression”KRT19“transcriptional regulation”
HOXA11“up-regulates quantity by expression”PRL“transcriptional regulation”
PRLup-regulatesPRLRbinding

Disease & clinical

Clinical variants and AI predictions

ClinVar

36 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance26
Likely benign6
Benign3

Top pathogenic / likely-pathogenic (0)

SpliceAI

490 predictions. Top by Δscore:

VariantEffectΔscore
6:22287590:GAACC:Gacceptor_loss1.0000
6:22287595:T:Cacceptor_loss1.0000
6:22290168:GCTCA:Gdonor_loss1.0000
6:22290169:CTCA:Cdonor_loss1.0000
6:22290170:TCA:Tdonor_loss1.0000
6:22290171:CACC:Cdonor_loss1.0000
6:22290172:ACCT:Adonor_loss1.0000
6:22292533:CTCA:Cdonor_loss1.0000
6:22292534:TCA:Tdonor_loss1.0000
6:22292535:CAC:Cdonor_loss1.0000
6:22292536:A:ACdonor_gain1.0000
6:22292536:A:Cdonor_loss1.0000
6:22292536:ACATT:Adonor_gain1.0000
6:22292537:C:CAdonor_gain1.0000
6:22292537:CA:Cdonor_gain1.0000
6:22292537:CATT:Cdonor_gain1.0000
6:22292537:CATTC:Cdonor_gain1.0000
6:22292641:TTATC:Tacceptor_gain1.0000
6:22292643:ATC:Aacceptor_gain1.0000
6:22292643:ATCCT:Aacceptor_loss1.0000
6:22292644:TC:Tacceptor_gain1.0000
6:22292645:CC:Cacceptor_gain1.0000
6:22292645:CCT:Cacceptor_loss1.0000
6:22292646:C:Aacceptor_loss1.0000
6:22292646:C:CCacceptor_gain1.0000
6:22292647:T:Aacceptor_loss1.0000
6:22292652:A:ACacceptor_gain1.0000
6:22287589:TGAAC:Tacceptor_gain0.9900
6:22287594:C:CCacceptor_gain0.9900
6:22289610:C:CAdonor_gain0.9900

AlphaMissense

1476 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
6:22287469:T:GD206A0.997
6:22290309:C:AW119C0.997
6:22290309:C:GW119C0.997
6:22287467:A:GS207P0.996
6:22287470:C:GD206H0.996
6:22290311:A:GW119R0.996
6:22290311:A:TW119R0.996
6:22292593:C:GC86S0.996
6:22292594:A:TC86S0.996
6:22287430:C:GC219S0.995
6:22287431:A:TC219S0.995
6:22287445:A:GL214P0.995
6:22287469:T:AD206V0.995
6:22287469:T:CD206G0.995
6:22287478:A:GL203P0.995
6:22287480:G:CC202W0.995
6:22287481:C:GC202S0.995
6:22287482:A:TC202S0.995
6:22290205:A:GL154P0.995
6:22287459:T:AK209N0.994
6:22287459:T:GK209N0.994
6:22287482:A:GC202R0.994
6:22292592:G:CC86W0.994
6:22292593:C:TC86Y0.994
6:22287431:A:GC219R0.993
6:22287475:C:GR204P0.993
6:22287481:C:TC202Y0.993
6:22292594:A:GC86R0.993
6:22287471:C:AR205S0.992
6:22287471:C:GR205S0.992

dbSNP variants (sampled 300 via entrez): RS1000159359 (6:22304149 A>G), RS1000232359 (6:22303593 A>C), RS1000405800 (6:22289400 A>G), RS1000768869 (6:22303259 A>G), RS1001425245 (6:22290886 G>A), RS1001663288 (6:22301818 G>C), RS1001852048 (6:22292680 T>A), RS1002003216 (6:22303640 A>G), RS1002127500 (6:22302230 G>A), RS1002324928 (6:22289678 T>C), RS1002609795 (6:22296498 A>G), RS1002875672 (6:22293305 G>T), RS1003027364 (6:22286770 G>A), RS1003077999 (6:22300131 G>A), RS1003203155 (6:22294942 A>T)

Disease associations

OMIM: gene MIM:176760 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

8 associations (top):

StudyTraitp-value
GCST000317_13Obesity3.000000e-07
GCST001086_7Paget’s disease4.000000e-06
GCST001784_13Pulmonary function (smoking interaction)2.000000e-07
GCST001784_35Pulmonary function (smoking interaction)2.000000e-07
GCST007692_56Chronic obstructive pulmonary disease1.000000e-09
GCST010002_49Refractive error6.000000e-38
GCST90011898_138Alanine aminotransferase levels2.000000e-11
GCST90011899_19Aspartate aminotransferase levels4.000000e-10

EFO canonical traits (3, from GWAS)

EFO IDTrait name
EFO:0003892pulmonary function measurement
EFO:0004713FEV/FVC ratio
EFO:0004736aspartate aminotransferase measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

137 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Risperidonedecreases reaction, increases secretion, affects reaction, increases expression, affects cotreatment30
Bromocriptinedecreases reaction, increases secretion, increases expression, decreases expression, decreases secretion18
Haloperidolaffects expression, increases expression, increases secretion14
Estradioldecreases reaction, increases reaction, affects reaction, decreases abundance, increases abundance (+3 more)12
Progesteroneincreases secretion, increases expression, increases reaction, affects reaction, decreases abundance (+2 more)12
Olanzapineaffects cotreatment, increases expression, increases secretion11
Medroxyprogesterone Acetateincreases secretion, affects reaction, affects cotreatment, increases expression, increases reaction (+1 more)11
Metoclopramidedecreases reaction, increases secretion, affects expression, increases expression10
Sulpiridedecreases reaction, increases abundance, increases expression, increases secretion9
8-Bromo Cyclic Adenosine Monophosphateincreases reaction, decreases reaction, increases expression, affects cotreatment, decreases expression (+2 more)9
Cocaineaffects reaction, increases expression, affects secretion, decreases reaction, decreases expression (+2 more)8
Testosteronedecreases reaction, increases abundance, affects abundance, decreases abundance, increases secretion (+2 more)8
Aripiprazoledecreases reaction, increases expression, increases secretion, decreases expression6
Amisulprideincreases secretion, increases expression5
Cyclic AMPincreases reaction, decreases reaction, increases secretion, affects cotreatment, increases expression5
bisphenol Aaffects cotreatment, decreases methylation, decreases expression, increases expression, increases secretion4
Clomipraminedecreases reaction, affects secretion, increases expression, increases secretion4
Fenfluramineaffects reaction, increases expression4
Verapamildecreases reaction, increases secretion, increases reaction, increases expression4
Cabergolinedecreases expression, decreases secretion3
Clozapineaffects cotreatment, increases secretion, increases expression3
Contraceptives, Oralincreases expression3
Copperaffects binding, increases reaction, decreases expression, affects cotreatment, decreases reaction (+1 more)3
Dexamethasoneaffects cotreatment, increases expression3
Bucladesineaffects cotreatment, increases reaction, increases secretion, increases expression, decreases reaction3
Fluoxetineincreases expression, affects cotreatment3
Methadoneaffects secretion, increases expression, increases secretion3
Raloxifene Hydrochlorideaffects cotreatment, decreases expression, decreases reaction, increases reaction, increases secretion (+1 more)3
dironyldecreases expression2
1-(3-chlorophenyl)piperazineincreases expression, decreases reaction2

Cellosaurus cell lines

2 cell lines: 2 transformed cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_WS56CHO-p658-hPRLTransformed cell lineFemale
CVCL_WS57CHO-pEDdc-hPRLTransformed cell lineFemale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

  • Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): bone Paget disease