PRR11-AS1

Summary

PRR11-AS1 (PRR11 antisense RNA 1, HGNC:56242) is a long non-coding RNA gene on chromosome 17q22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56242
Approved symbol	PRR11-AS1
Name	PRR11 antisense RNA 1
Location	17q22
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC099850.3, AC099850.4, lnc-SKA2-1, CTD-2510F5.4
Ensembl gene	ENSG00000265415
Ensembl biotype	lncRNA
Entrez	125775237
RNAcentral	URS000049F51A — lncRNA, 321 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000577678

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000577678 — 2 exons

Exon	Start	End
ENSE00002700904	59203733	59203829
ENSE00002722740	59202677	59202900

Expression profiles

Bgee: expression breadth ubiquitous, 107 present calls, max score 83.75.

Top tissues by expression

107 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.75	gold quality
colonic epithelium	UBERON:0000397	78.85	gold quality
ganglionic eminence	UBERON:0004023	78.83	gold quality
skeletal muscle tissue	UBERON:0001134	75.89	gold quality
ventricular zone	UBERON:0003053	75.47	gold quality
cortical plate	UBERON:0005343	75.03	gold quality
stromal cell of endometrium	CL:0002255	74.25	gold quality
placenta	UBERON:0001987	71.54	gold quality
duodenum	UBERON:0002114	68.28	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.98	gold quality
urinary bladder	UBERON:0001255	65.23	gold quality
leukocyte	CL:0000738	63.92	gold quality
endometrium	UBERON:0001295	60.97	gold quality
prefrontal cortex	UBERON:0000451	60.91	gold quality
cortex of kidney	UBERON:0001225	60.45	gold quality
liver	UBERON:0002107	59.51	gold quality
monocyte	CL:0000576	59.28	gold quality
frontal cortex	UBERON:0001870	59.21	gold quality
blood	UBERON:0000178	58.92	gold quality
islet of Langerhans	UBERON:0000006	57.98	gold quality
right lobe of thyroid gland	UBERON:0001119	57.42	gold quality
superior frontal gyrus	UBERON:0002661	57.15	gold quality
right lobe of liver	UBERON:0001114	56.65	gold quality
kidney	UBERON:0002113	55.80	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.50	gold quality
pancreas	UBERON:0001264	54.21	gold quality
muscle of leg	UBERON:0001383	53.97	gold quality
brain	UBERON:0000955	52.69	gold quality
adult mammalian kidney	UBERON:0000082	52.66	gold quality
adrenal tissue	UBERON:0018303	52.64	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.