PSD2-AS1

Summary

PSD2-AS1 (PSD2 antisense RNA 1, HGNC:52765) is a long non-coding RNA gene on chromosome 5q31.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52765
Approved symbol	PSD2-AS1
Name	PSD2 antisense RNA 1
Location	5q31.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249131
Ensembl biotype	lncRNA
Entrez	101929696
RNAcentral	URS0000759BCE — lncRNA, 701 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 19 — 19 lncRNA

ENST00000515306, ENST00000657032, ENST00000663789, ENST00000666513, ENST00000838966, ENST00000838967, ENST00000838968, ENST00000838969, ENST00000838970, ENST00000838971, ENST00000838972, ENST00000838973, ENST00000838974, ENST00000838975, ENST00000838976, ENST00000838977, ENST00000838978, ENST00000838979, ENST00000838980

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000515306 — 3 exons

Exon	Start	End
ENSE00002061794	139745170	139745259
ENSE00004260727	139746194	139746266
ENSE00004260736	139740951	139741640

Expression profiles

Bgee: expression breadth broad, 88 present calls, max score 91.40.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0828 / max 29.3205, expressed in 24 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
63772	0.0422	7
63773	0.0406	16

Top tissues by expression

92 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skeletal muscle tissue	UBERON:0001134	91.40	silver quality
thymus	UBERON:0002370	85.55	gold quality
left testis	UBERON:0004533	84.19	gold quality
testis	UBERON:0000473	83.25	gold quality
right testis	UBERON:0004534	82.63	gold quality
sural nerve	UBERON:0015488	70.03	gold quality
quadriceps femoris	UBERON:0001377	64.14	gold quality
cerebellar vermis	UBERON:0004720	63.05	gold quality
lung	UBERON:0002048	56.82	silver quality
hindlimb stylopod muscle	UBERON:0004252	55.14	gold quality
subcutaneous adipose tissue	UBERON:0002190	53.54	gold quality
myometrium	UBERON:0001296	53.30	gold quality
cortex of kidney	UBERON:0001225	53.19	gold quality
prefrontal cortex	UBERON:0000451	52.18	gold quality
blood	UBERON:0000178	50.95	gold quality
monocyte	CL:0000576	50.85	silver quality
superior frontal gyrus	UBERON:0002661	50.76	gold quality
multicellular organism	UBERON:0000468	50.32	gold quality
liver	UBERON:0002107	49.94	silver quality
prostate gland	UBERON:0002367	49.64	gold quality
skin of leg	UBERON:0001511	48.31	gold quality
cerebellum	UBERON:0002037	48.27	silver quality
cerebellar cortex	UBERON:0002129	48.22	silver quality
right hemisphere of cerebellum	UBERON:0014890	48.19	silver quality
cerebellar hemisphere	UBERON:0002245	48.04	silver quality
urinary bladder	UBERON:0001255	48.00	gold quality
muscle of leg	UBERON:0001383	47.99	gold quality
kidney	UBERON:0002113	47.94	silver quality
frontal cortex	UBERON:0001870	47.79	gold quality
vermiform appendix	UBERON:0001154	47.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.