PSMA8
geneOn this page
Also known as MGC26605PSMA7L
Summary
PSMA8 (proteasome 20S subunit alpha 8, HGNC:22985) is a protein-coding gene on chromosome 18q11.2, encoding Proteasome subunit alpha-type 8 (Q8TAA3). Component of the spermatoproteasome, a proteasome specifically found in testis that promotes acetylation-dependent degradation of histones, thereby participating actively to the exchange of histones during spermatogenesis.
Predicted to be involved in meiotic cell cycle and proteasome-mediated ubiquitin-dependent protein catabolic process. Located in extracellular exosome and nucleus.
Source: NCBI Gene 143471 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 40 total
- Druggable target: yes — 5 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001025096
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:22985 |
| Approved symbol | PSMA8 |
| Name | proteasome 20S subunit alpha 8 |
| Location | 18q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MGC26605, PSMA7L |
| Ensembl gene | ENSG00000154611 |
| Ensembl biotype | protein_coding |
| OMIM | 617841 |
| Entrez | 143471 |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 4 protein_coding, 1 nonsense_mediated_decay
ENST00000308268, ENST00000343848, ENST00000415576, ENST00000538664, ENST00000612461
RefSeq mRNA: 4 — MANE Select: NM_001025096
NM_001025096, NM_001025097, NM_001308188, NM_144662
CCDS: CCDS32808, CCDS45842, CCDS45843, CCDS77169
Canonical transcript exons
ENST00000415576 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003463506 | 26144559 | 26144685 |
| ENSE00003478661 | 26158122 | 26158244 |
| ENSE00003502593 | 26192319 | 26193355 |
| ENSE00003553955 | 26179068 | 26179130 |
| ENSE00003646732 | 26178830 | 26178949 |
| ENSE00003658826 | 26151858 | 26151982 |
| ENSE00003906978 | 26133869 | 26134067 |
Expression profiles
Bgee: expression breadth broad, 46 present calls, max score 82.47.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2820 / max 65.6462, expressed in 81 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 169764 | 0.2602 | 80 |
| 169765 | 0.0218 | 7 |
Top tissues by expression
210 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right testis | UBERON:0004534 | 82.47 | gold quality |
| sperm | CL:0000019 | 82.23 | gold quality |
| left testis | UBERON:0004533 | 81.87 | gold quality |
| testis | UBERON:0000473 | 81.45 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 78.98 | gold quality |
| buccal mucosa cell | CL:0002336 | 70.29 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 68.20 | gold quality |
| adult organism | UBERON:0007023 | 67.31 | gold quality |
| secondary oocyte | CL:0000655 | 62.53 | gold quality |
| lymph node | UBERON:0000029 | 59.42 | gold quality |
| pancreatic ductal cell | CL:0002079 | 57.77 | silver quality |
| granulocyte | CL:0000094 | 57.58 | gold quality |
| vermiform appendix | UBERON:0001154 | 54.97 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 54.45 | silver quality |
| epithelial cell of pancreas | CL:0000083 | 54.38 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 54.34 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 54.23 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 53.98 | gold quality |
| kidney epithelium | UBERON:0004819 | 53.93 | gold quality |
| upper arm skin | UBERON:0004263 | 53.52 | gold quality |
| deltoid | UBERON:0001476 | 52.35 | gold quality |
| caecum | UBERON:0001153 | 51.68 | gold quality |
| ileal mucosa | UBERON:0000331 | 51.38 | silver quality |
| myocardium | UBERON:0002349 | 50.97 | gold quality |
| quadriceps femoris | UBERON:0001377 | 49.49 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 48.74 | gold quality |
| oocyte | CL:0000023 | 48.60 | gold quality |
| vastus lateralis | UBERON:0001379 | 48.35 | gold quality |
| tonsil | UBERON:0002372 | 47.23 | gold quality |
| oviduct epithelium | UBERON:0004804 | 45.66 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 2.58 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
62 targeting PSMA8, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-4692 | 100.00 | 67.32 | 2066 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4514 | 99.99 | 67.10 | 1870 |
| HSA-MIR-499A-5P | 99.98 | 70.79 | 1323 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-1468-3P | 99.96 | 72.74 | 3797 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-380-3P | 99.89 | 70.18 | 1978 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-3941 | 99.86 | 70.54 | 2735 |
| HSA-MIR-548AZ-5P | 99.83 | 69.94 | 3230 |
| HSA-MIR-548T-5P | 99.83 | 69.91 | 3220 |
| HSA-MIR-448 | 99.79 | 72.37 | 2103 |
| HSA-MIR-548AG | 99.77 | 69.25 | 1492 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-4699-3P | 99.71 | 70.15 | 3142 |
| HSA-MIR-548M | 99.70 | 68.87 | 1749 |
| HSA-MIR-3059-5P | 99.70 | 69.93 | 2491 |
| HSA-MIR-548AI | 99.69 | 69.24 | 1494 |
| HSA-MIR-548BA | 99.69 | 69.14 | 1514 |
| HSA-MIR-570-5P | 99.69 | 69.24 | 1494 |
| HSA-MIR-379-3P | 99.69 | 69.60 | 1524 |
| HSA-MIR-411-3P | 99.69 | 69.63 | 1524 |
| HSA-MIR-4666B | 99.64 | 68.69 | 1282 |
| HSA-MIR-891B | 99.59 | 69.81 | 1083 |
| HSA-MIR-190A-5P | 99.54 | 71.45 | 933 |
| HSA-MIR-190B-5P | 99.54 | 71.40 | 925 |
Literature-anchored findings (GeneRIF, showing 1)
- This article provides an overview of some of the components in the human 20 S proteasome. (PMID:12376572)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | psma8 | ENSDARG00000010965 |
| mus_musculus | Psma8 | ENSMUSG00000036743 |
| rattus_norvegicus | Psma8 | ENSRNOG00000030363 |
| drosophila_melanogaster | Prosbeta1 | FBGN0010590 |
| caenorhabditis_elegans | WBGENE00003947 |
Paralogs (18): PSMB1 (ENSG00000008018), PSMA4 (ENSG00000041357), PSMA3 (ENSG00000100567), PSMB5 (ENSG00000100804), PSMA6 (ENSG00000100902), PSMA7 (ENSG00000101182), PSMA2 (ENSG00000106588), PSMB2 (ENSG00000126067), PSMA1 (ENSG00000129084), PSMB7 (ENSG00000136930), PSMB6 (ENSG00000142507), PSMA5 (ENSG00000143106), PSMB4 (ENSG00000159377), PSMB8 (ENSG00000204264), PSMB10 (ENSG00000205220), PSMB11 (ENSG00000222028), PSMB9 (ENSG00000240065), PSMB3 (ENSG00000277791)
Protein
Protein identifiers
Proteasome subunit alpha-type 8 — Q8TAA3 (reviewed: Q8TAA3)
Alternative names: Proteasome alpha 4 subunit, Proteasome subunit alpha-type 7-like
All UniProt accessions (3): Q8TAA3, A0A087WYS6, F5GY34
UniProt curated annotations — full annotation on UniProt →
Function. Component of the spermatoproteasome, a proteasome specifically found in testis that promotes acetylation-dependent degradation of histones, thereby participating actively to the exchange of histones during spermatogenesis. The proteasome is a protein complex that degrades unneeded or damaged proteins by proteolysis, a chemical reaction that breaks peptide bonds. Required for 20S core proteasome assembly, essential for the degradation of meiotic proteins RAD51 and RPA1 at late prophase I and the progression of meiosis I during spermatogenesis. Localizes to the synaptonemal complex, a ‘zipper’-like structure that holds homologous chromosome pairs in synapsis during meiotic prophase I.
Subunit / interactions. Component of the outer alpha-ring of the 20S proteasome core which is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The catalytic chamber with the active sites is on the inside of the barrel. Interacts with canonical subunits of the spermatoproteasome, including proteasome activators PSME4 (also called PA200) and PSME3 (also called PA28-gamma). Interacts with proteasome-interacting proteins chaperones, ubiquitin ligases and ubiquitin specific proteases. Interacts with meiotic proteins cyclin dependent kinase CDK1 and the ATPase TRIP13 as well as proteins of the synaptonemal complex SIX6OS1 and SYCE3.
Subcellular location. Nucleus.
Similarity. Belongs to the peptidase T1A family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8TAA3-1 | 1 | yes |
| Q8TAA3-2 | 2 | |
| Q8TAA3-5 | 3 |
RefSeq proteins (4): NP_001020267, NP_001020268, NP_001295117, NP_653263 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000426 | Proteasome_asu_N | Domain |
| IPR001353 | Proteasome_sua/b | Family |
| IPR023332 | Proteasome_alpha-type | Family |
| IPR029055 | Ntn_hydrolases_N | Homologous_superfamily |
| IPR050115 | Proteasome_alpha | Family |
Pfam: PF00227, PF10584
UniProt features (4 total): splice variant 2, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8TAA3-F1 | 84.04 | 0.33 |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-9907900 | Proteasome assembly |
MSigDB gene sets: 125 (showing top):
WHITEHURST_PACLITAXEL_SENSITIVITY, GOBP_REGULATION_OF_NUCLEAR_DIVISION, KEGG_PROTEASOME, GOBP_REGULATION_OF_MEIOTIC_NUCLEAR_DIVISION, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, GOBP_MALE_GAMETE_GENERATION, GOBP_REGULATION_OF_MEIOTIC_CELL_CYCLE, INAMURA_LUNG_CANCER_SCC_UP, GOBP_ORGANELLE_FISSION, GOBP_CILIUM_MOVEMENT, GOBP_REGULATION_OF_CELL_CYCLE, GOBP_CILIUM_OR_FLAGELLUM_DEPENDENT_CELL_MOTILITY, GOBP_REGULATION_OF_REPRODUCTIVE_PROCESS, AFP1_Q6, AACTTT_UNKNOWN
GO Biological Process (8): spermatogenesis (GO:0007283), proteasomal protein catabolic process (GO:0010498), cell differentiation (GO:0030154), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), meiotic cell cycle (GO:0051321), regulation of meiosis I (GO:0060631), ubiquitin-dependent protein catabolic process (GO:0006511), obsolete proteolysis involved in protein catabolic process (GO:0051603)
GO Molecular Function (0):
GO Cellular Component (7): nucleus (GO:0005634), cytosol (GO:0005829), proteasome core complex, alpha-subunit complex (GO:0019773), extracellular exosome (GO:0070062), spermatoproteasome complex (GO:1990111), proteasome complex (GO:0000502), proteasome core complex (GO:0005839)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Post-translational protein modification | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| intracellular protein-containing complex | 3 |
| proteasome complex | 2 |
| developmental process involved in reproduction | 1 |
| male gamete generation | 1 |
| protein catabolic process | 1 |
| cellular developmental process | 1 |
| ubiquitin-dependent protein catabolic process | 1 |
| proteasomal protein catabolic process | 1 |
| cell cycle | 1 |
| sexual reproduction | 1 |
| reproductive process | 1 |
| meiotic nuclear division | 1 |
| meiosis I | 1 |
| regulation of meiotic nuclear division | 1 |
| protein ubiquitination | 1 |
| modification-dependent protein catabolic process | 1 |
| intracellular membrane-bounded organelle | 1 |
| cytoplasm | 1 |
| cellular anatomical structure | 1 |
| proteasome core complex | 1 |
| extracellular vesicle | 1 |
| endopeptidase complex | 1 |
| catalytic complex | 1 |
Protein interactions and networks
STRING
1708 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PSMA8 | PSMB10 | P40306 | 801 |
| PSMA8 | PSMB9 | P28065 | 747 |
| PSMA8 | PSMB8 | P28062 | 728 |
| PSMA8 | PSME4 | Q14997 | 688 |
| PSMA8 | PSMB11 | A5LHX3 | 654 |
| PSMA8 | PSMB2 | P31145 | 604 |
| PSMA8 | PSMA1 | P25786 | 541 |
| PSMA8 | SYCP3 | Q8IZU3 | 539 |
| PSMA8 | PSME3 | P61289 | 516 |
| PSMA8 | PSMC3 | P17980 | 489 |
| PSMA8 | PSMC2 | P35998 | 474 |
| PSMA8 | MEIKIN | A0A087WXM9 | 473 |
| PSMA8 | PSMD14 | O00487 | 470 |
| PSMA8 | PSMC4 | P43686 | 468 |
| PSMA8 | PSMD12 | O00232 | 455 |
| PSMA8 | NFKB2 | Q00653 | 455 |
IntAct
33 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PSMA1 | PSMA7 | psi-mi:“MI:0914”(association) | 0.950 |
| PSMA2 | PSMA7 | psi-mi:“MI:0914”(association) | 0.850 |
| PSMA5 | PSMA7 | psi-mi:“MI:0914”(association) | 0.800 |
| PSMB7 | PSMA7 | psi-mi:“MI:0914”(association) | 0.790 |
| PSMB2 | PSMA7 | psi-mi:“MI:0914”(association) | 0.790 |
| PSMB3 | PSMA7 | psi-mi:“MI:0914”(association) | 0.770 |
| PSMB4 | PSMA7 | psi-mi:“MI:0914”(association) | 0.730 |
| POLR3GL | POLR3A | psi-mi:“MI:0914”(association) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| PSMB3 | PSMD11 | psi-mi:“MI:0914”(association) | 0.640 |
| PSMB1 | PSMA7 | psi-mi:“MI:0914”(association) | 0.640 |
| CFTR | HAX1 | psi-mi:“MI:0914”(association) | 0.610 |
| PSMB9 | PSMD11 | psi-mi:“MI:0914”(association) | 0.530 |
| PSMA7 | PSMG1 | psi-mi:“MI:0914”(association) | 0.530 |
| PSMA2 | PSMD11 | psi-mi:“MI:0914”(association) | 0.530 |
| PSMG2 | PSMA7 | psi-mi:“MI:0914”(association) | 0.530 |
| PSMB7 | PSMD12 | psi-mi:“MI:0914”(association) | 0.530 |
| PSMA8 | H2BC9 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SHC2 | VWA8 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (125): PSMA8 (Affinity Capture-MS), PSMA8 (Affinity Capture-MS), PSMA8 (Affinity Capture-MS), PSMA1 (Co-fractionation), PSMA2 (Co-fractionation), PSMA3 (Co-fractionation), PSMA4 (Co-fractionation), PSMA5 (Co-fractionation), PSMA8 (Co-fractionation), PSMA8 (Co-fractionation), PSMA8 (Co-fractionation), PSMB2 (Co-fractionation), PSMB3 (Co-fractionation), PSMB4 (Co-fractionation), PSMB5 (Co-fractionation)
ESM2 similar proteins: A2YXU2, A2Z3I9, O13268, O14818, O16811, O17586, O23715, O24030, O24362, O24616, O48551, O70435, O81146, O94517, P18422, P21243, P22769, P25788, P30186, P34120, P40303, P48004, P52428, P60900, P60901, P90513, Q0J006, Q10329, Q24178, Q27563, Q2YDE4, Q3ZBG0, Q4R7D9, Q58DU5, Q5RDH8, Q6YT00, Q8TAA3, Q95005, Q9CWH6, Q9LSU0
Diamond homologs: A2Y9X7, A2YVR7, A2YXU2, A2Z3I9, A3CW55, A4FZT6, A4YCU9, A5UJS2, A6VIP0, A7I9C7, B0R2T2, B6YSH9, B8GEZ3, C3MQ43, C3MVG1, C3N5R0, C3NEC6, C3NHC6, C4KHD9, C5A2C2, C6A459, O13268, O14818, O23708, O24030, O24616, O24733, O26782, O29760, O48551, O59219, O73672, O81148, O81149, O94579, P0DKK3, P0DKK4, P17220, P23638, P23639
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 24 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Antigen processing: Ub, ATP-independent proteasomal degradation | 10 | 285.5× | 1e-22 |
| Regulation of activated PAK-2p34 by proteasome mediated degradation | 11 | 153.2× | 2e-21 |
| Cross-presentation of soluble exogenous antigens (endosomes) | 12 | 152.3× | 3e-23 |
| Regulation of ornithine decarboxylase (ODC) | 11 | 149.6× | 2e-21 |
| Vpu mediated degradation of CD4 | 11 | 146.1× | 2e-21 |
| Autodegradation of the E3 ubiquitin ligase COP1 | 11 | 146.1× | 2e-21 |
| Ubiquitin-dependent degradation of Cyclin D | 11 | 146.1× | 2e-21 |
| Proteasome assembly | 14 | 142.8× | 5e-27 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| proteasome-mediated ubiquitin-dependent protein catabolic process | 12 | 27.2× | 1e-13 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
40 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 37 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1415 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 18:26134073:G:GT | donor_gain | 1.0000 |
| 18:26158120:A:AG | acceptor_gain | 1.0000 |
| 18:26158121:G:GG | acceptor_gain | 1.0000 |
| 18:26158121:GAA:G | acceptor_gain | 1.0000 |
| 18:26158121:GAAAT:G | acceptor_gain | 1.0000 |
| 18:26158240:GGAAG:G | donor_gain | 1.0000 |
| 18:26158241:GAAG:G | donor_gain | 1.0000 |
| 18:26158241:GAAGG:G | donor_gain | 1.0000 |
| 18:26158246:T:A | donor_loss | 1.0000 |
| 18:26178827:A:AG | acceptor_gain | 1.0000 |
| 18:26178827:AAG:A | acceptor_gain | 1.0000 |
| 18:26178828:A:AG | acceptor_gain | 1.0000 |
| 18:26178828:AG:A | acceptor_gain | 1.0000 |
| 18:26178828:AGG:A | acceptor_loss | 1.0000 |
| 18:26178829:G:GG | acceptor_gain | 1.0000 |
| 18:26178829:GG:G | acceptor_gain | 1.0000 |
| 18:26178829:GGC:G | acceptor_gain | 1.0000 |
| 18:26178829:GGCA:G | acceptor_gain | 1.0000 |
| 18:26178829:GGCAA:G | acceptor_gain | 1.0000 |
| 18:26178945:TAGAA:T | donor_gain | 1.0000 |
| 18:26178946:AGAA:A | donor_gain | 1.0000 |
| 18:26178946:AGAAG:A | donor_loss | 1.0000 |
| 18:26178947:GAA:G | donor_gain | 1.0000 |
| 18:26178947:GAAG:G | donor_gain | 1.0000 |
| 18:26178949:AG:A | donor_loss | 1.0000 |
| 18:26178950:G:GG | donor_gain | 1.0000 |
| 18:26178951:TAA:T | donor_loss | 1.0000 |
| 18:26179063:ATTAG:A | acceptor_gain | 1.0000 |
| 18:26179064:T:G | acceptor_gain | 1.0000 |
| 18:26179066:A:AG | acceptor_gain | 1.0000 |
AlphaMissense
1628 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 18:26133999:T:C | F12L | 1.000 |
| 18:26134001:C:A | F12L | 1.000 |
| 18:26134001:C:G | F12L | 1.000 |
| 18:26134012:G:A | G16E | 0.999 |
| 18:26158147:G:C | R133T | 0.999 |
| 18:26134000:T:G | F12C | 0.998 |
| 18:26134012:G:T | G16V | 0.998 |
| 18:26151907:C:G | C99W | 0.998 |
| 18:26151921:T:C | L104P | 0.998 |
| 18:26151968:G:C | A120P | 0.998 |
| 18:26158148:A:C | R133S | 0.998 |
| 18:26158148:A:T | R133S | 0.998 |
| 18:26158150:C:A | P134H | 0.998 |
| 18:26158225:G:A | G159D | 0.998 |
| 18:26158225:G:T | G159V | 0.998 |
| 18:26158239:T:A | W164R | 0.998 |
| 18:26158239:T:C | W164R | 0.998 |
| 18:26178843:G:A | G170D | 0.998 |
| 18:26133999:T:G | F12V | 0.997 |
| 18:26134000:T:C | F12S | 0.997 |
| 18:26134011:G:A | G16R | 0.997 |
| 18:26134011:G:C | G16R | 0.997 |
| 18:26134018:T:A | L18H | 0.997 |
| 18:26134025:A:C | Q20H | 0.997 |
| 18:26134025:A:T | Q20H | 0.997 |
| 18:26134036:C:A | A24D | 0.997 |
| 18:26144560:T:A | V35D | 0.997 |
| 18:26151897:G:C | R96P | 0.997 |
| 18:26151969:C:A | A120E | 0.997 |
| 18:26158152:T:C | F135L | 0.997 |
dbSNP variants (sampled 300 via entrez): RS1000028220 (18:26157445 C>T), RS1000190128 (18:26185992 A>C), RS1000275566 (18:26164734 G>T), RS1000305229 (18:26137937 G>A), RS1000389151 (18:26150981 A>G), RS1000459935 (18:26164544 G>C), RS1000499058 (18:26157548 T>C), RS1000550617 (18:26162599 C>T), RS1000570759 (18:26137583 T>C), RS1000603017 (18:26162895 A>G), RS1000724765 (18:26179231 T>C), RS1000791256 (18:26138341 G>C), RS1000827971 (18:26192568 T>A,G), RS1000843394 (18:26138747 TG>T), RS1000863004 (18:26192847 A>G)
Disease associations
OMIM: gene MIM:617841 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001966_3 | Rhegmatogenous retinal detachment | 2.000000e-06 |
| GCST002127_20 | Periodontitis (Mean PAL) | 5.000000e-06 |
| GCST002127_35 | Periodontitis (Mean PAL) | 4.000000e-06 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2364701 (PROTEIN COMPLEX), CHEMBL3831201 (PROTEIN COMPLEX GROUP)
Molecules with ChEMBL bioactivity
5 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 41,720 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL325041 | BORTEZOMIB | 4 | 13,120 |
| CHEMBL451887 | CARFILZOMIB | 4 | 12,508 |
| CHEMBL2141296 | IXAZOMIB | 3 | 6,022 |
| CHEMBL371405 | MARIZOMIB | 3 | 7,332 |
| CHEMBL2103884 | OPROZOMIB | 2 | 2,738 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
312 potent at pChembl≥5 of 336 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.22 | IC50 | 0.6 | nM | CINNABARAMIDE G |
| 9.22 | Ki | 0.6 | nM | CHEMBL5624541 |
| 9.22 | Ki | 0.6 | nM | BORTEZOMIB |
| 9.04 | IC50 | 0.92 | nM | CHEMBL4102324 |
| 9.00 | IC50 | 1 | nM | CINNABARAMIDE A |
| 8.89 | IC50 | 1.3 | nM | MARIZOMIB |
| 8.82 | IC50 | 1.5 | nM | CHEMBL4460323 |
| 8.70 | IC50 | 2 | nM | CHEMBL307387 |
| 8.66 | IC50 | 2.2 | nM | CHEMBL5419917 |
| 8.62 | IC50 | 2.4 | nM | CHEMBL4517600 |
| 8.62 | IC50 | 2.4 | nM | BORTEZOMIB |
| 8.62 | IC50 | 2.4 | nM | CHEMBL5413513 |
| 8.60 | IC50 | 2.5 | nM | CHEMBL4587036 |
| 8.59 | IC50 | 2.56 | nM | BORTEZOMIB |
| 8.57 | IC50 | 2.7 | nM | CHEMBL3237863 |
| 8.57 | IC50 | 2.7 | nM | CHEMBL5394365 |
| 8.52 | IC50 | 3 | nM | BORTEZOMIB |
| 8.47 | IC50 | 3.4 | nM | CHEMBL4444107 |
| 8.47 | IC50 | 3.4 | nM | CHEMBL6143686 |
| 8.46 | IC50 | 3.43 | nM | CHEMBL5197285 |
| 8.44 | IC50 | 3.6 | nM | CHEMBL4541038 |
| 8.41 | IC50 | 3.9 | nM | CHEMBL3237862 |
| 8.41 | IC50 | 3.9 | nM | CHEMBL4547405 |
| 8.40 | IC50 | 4 | nM | CHEMBL5406440 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237864 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237867 |
| 8.39 | IC50 | 4.03 | nM | CHEMBL5171225 |
| 8.37 | IC50 | 4.28 | nM | CHEMBL4581126 |
| 8.34 | IC50 | 4.6 | nM | CHEMBL4542373 |
| 8.34 | IC50 | 4.6 | nM | CHEMBL4558648 |
| 8.32 | IC50 | 4.8 | nM | CHEMBL3237873 |
| 8.32 | IC50 | 4.8 | nM | CHEMBL4467618 |
| 8.30 | IC50 | 5 | nM | CHEMBL5398681 |
| 8.29 | IC50 | 5.1 | nM | CHEMBL3237865 |
| 8.29 | IC50 | 5.15 | nM | CHEMBL5186240 |
| 8.28 | IC50 | 5.2 | nM | CHEMBL5429323 |
| 8.28 | IC50 | 5.2 | nM | CHEMBL5431451 |
| 8.25 | IC50 | 5.6 | nM | CHEMBL5423645 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237866 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237860 |
| 8.23 | IC50 | 5.9 | nM | CHEMBL3237868 |
| 8.22 | IC50 | 6 | nM | CINNABARAMIDE F |
| 8.22 | IC50 | 6 | nM | CHEMBL5412037 |
| 8.22 | IC50 | 6 | nM | CHEMBL74336 |
| 8.20 | IC50 | 6.3 | nM | CHEMBL5440712 |
| 8.19 | IC50 | 6.4 | nM | CHEMBL4447701 |
| 8.19 | IC50 | 6.4 | nM | CHEMBL4435814 |
| 8.19 | IC50 | 6.5 | nM | CHEMBL4436430 |
| 8.19 | IC50 | 6.5 | nM | IXAZOMIB |
| 8.16 | IC50 | 6.91 | nM | BORTEZOMIB |
PubChem BioAssay actives
280 with measured affinity, of 810 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| methyl (2R)-2-acetamido-3-[(2R,3S,4R)-2-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbonyl]sulfanylpropanoate | 277357: Inhibition of human 20S proteasome | ic50 | 0.0006 | uM |
| [(1R)-1-[[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-(pyrazine-2-carbonyl)amino]-3-methylbutyl]boronic acid | 2131634: Binding affinity to 20s proteosome (unknown origin) assessed as inhibition constant | ki | 0.0006 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0009 | uM |
| (1R,4R,5S)-1-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-5-methyl-6-oxa-2-azabicyclo[3.2.0]heptane-3,7-dione | 277357: Inhibition of human 20S proteasome | ic50 | 0.0010 | uM |
| (1R,4R,5S)-4-(2-chloroethyl)-1-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-5-methyl-6-oxa-2-azabicyclo[3.2.0]heptane-3,7-dione | 1853759: Inhibition of 20S proteasome (unknown origin) by fluorescence based assay | ic50 | 0.0013 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0015 | uM |
| N-[5-[[amino(nitramido)methylidene]amino]-1-[(4-methyl-1-oxopentan-2-yl)amino]-1-oxopentan-2-yl]-2-cyclopentyl-10-(1,3-dioxoisoindol-2-yl)decanamide | 3028: Compound was evaluated for inhibitory activity against 20S proteasome from human liver and brain | ic50 | 0.0020 | uM |
| 4-[(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-3-cyclopropylpropanoyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0022 | uM |
| 4-N-(4-benzoylphenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0024 | uM |
| 4-[(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopentylacetyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0024 | uM |
| Bortezomib | 1985684: Inhibition of 26S proteasome (unknown origin) | ic50 | 0.0024 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]acetyl]amino]-5-carbamimidamidopentanoyl]amino]-6-aminohexanoyl]amino]-6-aminohexanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-N-[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[2-[[2-[[2-[[(2S)-4-methyl-1-[[(2S)-4-methyl-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]pentanediamide | 1559513: Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate measured every 5 mins for 120 mins by fluorescence based assay | ic50 | 0.0025 | uM |
| 4-[(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopropylacetyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0027 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0027 | uM |
| 4-N-(4-fluorophenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0034 | uM |
| 1-N-[(2S)-4-(2,2-dimethylpropylamino)-1,4-dioxo-1-[[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]amino]butan-2-yl]-4-N-methyl-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0034 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0036 | uM |
| 4-N-(1,3-benzothiazol-2-yl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0039 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0039 | uM |
| [(1R)-1-[[2-[(2,5-dibromobenzoyl)amino]acetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0040 | uM |
| 1-N-[(2S)-4-(2,2-dimethylpropylamino)-1,4-dioxo-1-[[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]amino]butan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0040 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]acetyl]amino]-5-carbamimidamidopentanoyl]amino]-6-aminohexanoyl]amino]-6-aminohexanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-N-[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[2-[[2-[[2-[[(2S)-3-(4-hydroxyphenyl)-1-[[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopropan-2-yl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]pentanediamide | 1559513: Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate measured every 5 mins for 120 mins by fluorescence based assay | ic50 | 0.0043 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-(1,3,4-thiadiazol-2-yl)piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0046 | uM |
| 4-N-(4-chlorophenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0046 | uM |
| 4-N-(4-methoxyphenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0048 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-(4-phenylmethoxybutyl)butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0048 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-3-cyclopropylpropanoyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0050 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0051 | uM |
| (2S)-N’-(2,2-dimethylpropyl)-2-[[4-[methyl(pyridine-3-carbonyl)amino]piperidine-1-carbonyl]amino]-N-[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]butanediamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0052 | uM |
| 4-[(1R)-1-[[2-[(2,5-dichlorobenzoyl)amino]acetyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0052 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]acetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0052 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopropylacetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0056 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| benzyl N-[(2S)-1-[[(2R)-1-[(1R,2S)-2-[[(2R,3S)-3-[(2S)-butan-2-yl]-4-oxooxetane-2-carbonyl]amino]cyclopropyl]-4-phenylbutan-2-yl]amino]-1-oxopropan-2-yl]carbamate | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| (2S)-2-[(2,5-dichlorobenzoyl)amino]-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0059 | uM |
| (2R)-2-acetamido-3-[(2R,3S,4R)-2-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbonyl]sulfanylpropanoic acid | 277357: Inhibition of human 20S proteasome | ic50 | 0.0060 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopentylacetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0060 | uM |
| N-[5-[[amino(nitramido)methylidene]amino]-1-[(4-methyl-1-oxopentan-2-yl)amino]-1-oxopentan-2-yl]-10-cyano-2-cyclopentyldecanamide | 3028: Compound was evaluated for inhibitory activity against 20S proteasome from human liver and brain | ic50 | 0.0060 | uM |
| 4-[(1R)-1-[[2-[(2,5-dichlorobenzoyl)amino]acetyl]amino]-3-methylbutyl]-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0063 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-(1,2-oxazol-3-yl)piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0064 | uM |
| (2S)-2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]-4-methyl-N-[(2S)-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]pentanamide | 1559513: Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate measured every 5 mins for 120 mins by fluorescence based assay | ic50 | 0.0064 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-pyrazin-2-ylpiperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0065 | uM |
| Ixazomib | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0065 | uM |
| 4-N-(4-chlorophenyl)-1-N-[(2S)-4-(2,2-dimethylpropylamino)-1,4-dioxo-1-[[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]amino]butan-2-yl]-4-N-methylpiperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0069 | uM |
| (2S)-N-[(2S,3R,4R)-3-hydroxy-5-[[(2S)-1-[(2-hydroxy-4-methoxyphenyl)methylamino]-3-methyl-1-oxobutan-2-yl]amino]-5-oxo-1-phenyl-4-[(3,4,5-trimethoxyphenyl)methylamino]pentan-2-yl]-3,3-dimethyl-2-[(2-naphthalen-1-ylacetyl)amino]butanamide | 3027: Tested in vitro for inhibition of chymotrypsin like activity of purified human 20S proteasome | ic50 | 0.0070 | uM |
| Carfilzomib | 1770085: Inhibition of human 20S proteasome chymotrypsin-like activity in human RPMI-8226 cells using Suc-LLVY-AMC as fluorogenic substrate incubated for 3 hrs by fluorescence assay | ic50 | 0.0070 | uM |
| (2S)-2-[[(2S)-3-(4-hydroxyphenyl)-2-[(2-naphthalen-1-ylacetyl)amino]propanoyl]amino]-N-[1-(4-hydroxyphenyl)-3-oxopropan-2-yl]-3-methylbutanamide | 248827: Inhibitory concentration to inhibit chymotrypsin-like activity of 20S proteasome prepared from human leukemia HL-60 cells was determined | ic50 | 0.0070 | uM |
| (2S)-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]-2-(pyrazine-2-carbonylamino)butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0071 | uM |
CTD chemical–gene interactions
8 total (human), top 8 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases methylation | 1 |
| quercitrin | decreases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| bisphenol S | decreases methylation | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Methapyrilene | increases methylation | 1 |
| Phthalic Acids | decreases methylation | 1 |
| Rotenone | decreases expression | 1 |
ChEMBL screening assays
168 unique, capped per target: 159 binding, 6 admet, 3 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3222879 | Binding | Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition measured after 90 mins by fluorescence assay | Oxathiazole-2-one derivative of bortezomib: Synthesis, stability and proteasome inhibition activity — Medchemcomm |
| CHEMBL4736581 | ADMET | Inhibition of human 20S proteasome stably expressed in HEK293 cells at 5 to 50 uM using succinyl-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition and measured at 3 mins interval for 30 mins by fluorescence assay | A covalent p97/VCP ATPase inhibitor can overcome resistance to CB-5083 and NMS-873 in colorectal cancer cells. — Eur J Med Chem |
| CHEMBL834792 | Functional | Inhibitory concentration to inhibit trypsin-like activity of 20S proteasome from human leukemia HL-60 cells was determined | Structure-based design of derivatives of tyropeptin A as the potent and selective inhibitors of mammalian 20S proteasome. — Bioorg Med Chem Lett |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): periodontitis, rhegmatogenous retinal detachment