PSMB4
gene geneOn this page
Also known as HN3PROS26
Summary
PSMB4 (proteasome 20S subunit beta 4, HGNC:9541) is a protein-coding gene on chromosome 1q21.3, encoding Proteasome subunit beta type-4 (P28070). Non-catalytic component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. It is a common-essential gene (DepMap: required in 100.0% of cancer cell lines).
The proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure. The core structure is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a member of the proteasome B-type family, also known as the T1B family, that is a 20S core beta subunit.
Source: NCBI Gene 5692 — RefSeq curated summary.
At a glance
- Gene–disease (curated): proteasome-associated autoinflammatory syndrome 3 (Limited, GenCC)
- GWAS associations: 2
- Clinical variants (ClinVar): 300 total — 2 pathogenic
- GTEx eGene: eQTL in 9 tissues, sQTL in 1 (q < 0.05)
- Phenotypes (HPO): 26
- ChEMBL bioactivity: 5 clinical-phase molecules tested; no curated mechanism-of-action drug
- Cancer dependency (DepMap): dependent in 100.0% of screened cell lines (common-essential)
- Constraint (gnomAD): pLI 0.13 (intermediate), LOEUF 0.66 (unconstrained)
- MANE Select transcript:
NM_002796 - Interaction hub: 2,564 STRING partners (top 4% of genes corpus-wide)
- Notable: 300 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:9541 |
| Approved symbol | PSMB4 |
| Name | proteasome 20S subunit beta 4 |
| Location | 1q21.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HN3, PROS26 |
| Ensembl gene | ENSG00000159377 |
| Ensembl biotype | protein_coding |
| OMIM | 602177 |
| Entrez | 5692 |
Gene structure
Transcript identifiers
Ensembl transcripts: 18 — 6 protein_coding, 6 retained_intron, 6 nonsense_mediated_decay
MANE Select: ENST00000290541
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1, TSL 2: 4, TSL 5: 2
ENST00000290541, ENST00000466425, ENST00000474100, ENST00000476467, ENST00000493673, ENST00000495288, ENST00000495805, ENST00000933662, ENST00000933663, ENST00000933664, ENST00001007911, ENST00001007912, ENST00001025308, ENST00001084506, ENST00001084509, ENST00001084511, ENST00001084512, ENST00001143707
RefSeq mRNA: 1 — MANE Select: NM_002796
NM_002796
CCDS: CCDS996
Canonical transcript exons
ENST00000290541 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001045218 | 151401239 | 151401355 |
| ENSE00001850075 | 151401817 | 151401937 |
| ENSE00001942667 | 151399573 | 151399727 |
| ENSE00003517020 | 151399981 | 151400187 |
| ENSE00003522405 | 151401542 | 151401630 |
| ENSE00003527118 | 151400764 | 151400845 |
| ENSE00003560860 | 151400442 | 151400588 |
Expression profiles
Bgee: expression breadth ubiquitous, 300 present calls, max score 99.51.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 142.2616 / max 1567.9015, expressed in 1824 samples.
Highest expression (Bgee): epithelium of nasopharynx, endometrium epithelium, nasopharynx, adrenal gland, adenohypophysis.
Genetic regulation across tissues (GTEx eQTL / sQTL)
PSMB4 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 9 tissues and its splicing (sQTL) in 1 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
10 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Cells Cultured fibroblasts | eqtl | 9.3e-09 | +0.10 | 1:151469775:T:G |
| Adipose Subcutaneous | eqtl | 8.4e-06 | -0.12 | 1:151410845:C:T |
| Esophagus Mucosa | eqtl | 3.5e-05 | +0.11 | 1:151469775:T:G |
| Nerve Tibial | eqtl | 1.9e-04 | +0.08 | 1:151485717:C:T |
| Adipose Visceral Omentum | eqtl | 9.8e-03 | +0.08 | 1:151413383:C:T |
| Spleen | sqtl | 2.2e-02 | -0.66 | 1:151866247:G:A |
| Skin Sun Exposed Lower leg | eqtl | 2.3e-02 | -0.09 | 1:151457142:T:C |
| Spleen | eqtl | 2.7e-02 | -0.11 | 1:151371674:C:A |
| Brain Nucleus accumbens basal ganglia | eqtl | 4.6e-02 | +0.38 | 1:151108467:C:G |
| Whole Blood | eqtl | 4.8e-02 | +0.05 | 1:151423306:T:C |
FANTOM5 promoters
1 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 5226 | 142.2616 | 1824 |
Top tissues by expression
showing 100 of 301 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| epithelium of nasopharynx | UBERON:0001951 | 99.51 | gold quality |
| endometrium epithelium | UBERON:0004811 | 99.51 | gold quality |
| nasopharynx | UBERON:0001728 | 99.49 | gold quality |
| right adrenal gland | UBERON:0001233 | 99.21 | gold quality |
| adenohypophysis | UBERON:0002196 | 99.21 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 99.20 | gold quality |
| mucosa of stomach | UBERON:0001199 | 99.19 | gold quality |
| body of uterus | UBERON:0009853 | 99.19 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 99.18 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 99.17 | gold quality |
| left adrenal gland | UBERON:0001234 | 99.17 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 99.17 | gold quality |
| eye | UBERON:0000970 | 99.15 | gold quality |
| pituitary gland | UBERON:0000007 | 99.11 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 99.11 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 99.11 | gold quality |
| endocervix | UBERON:0000458 | 99.10 | gold quality |
| left uterine tube | UBERON:0001303 | 99.10 | gold quality |
| skin of leg | UBERON:0001511 | 99.10 | gold quality |
| lower esophagus | UBERON:0013473 | 99.10 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 99.10 | gold quality |
| granulocyte | CL:0000094 | 99.07 | gold quality |
| islet of Langerhans | UBERON:0000006 | 99.07 | gold quality |
| adrenal cortex | UBERON:0001235 | 99.07 | gold quality |
| right ovary | UBERON:0002118 | 99.07 | gold quality |
| metanephros cortex | UBERON:0010533 | 99.06 | gold quality |
| skin of abdomen | UBERON:0001416 | 99.05 | gold quality |
| gingival epithelium | UBERON:0001949 | 99.05 | gold quality |
| adult organism | UBERON:0007023 | 99.04 | gold quality |
| zone of skin | UBERON:0000014 | 99.03 | gold quality |
| left coronary artery | UBERON:0001626 | 99.03 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 99.03 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 99.02 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 99.01 | gold quality |
| thoracic aorta | UBERON:0001515 | 99.01 | gold quality |
| tibial artery | UBERON:0007610 | 99.01 | gold quality |
| aorta | UBERON:0000947 | 99.00 | gold quality |
| retina | UBERON:0000966 | 99.00 | gold quality |
| sigmoid colon | UBERON:0001159 | 99.00 | gold quality |
| ascending aorta | UBERON:0001496 | 99.00 | gold quality |
| popliteal artery | UBERON:0002250 | 99.00 | gold quality |
| left ovary | UBERON:0002119 | 98.99 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 98.99 | gold quality |
| prostate gland | UBERON:0002367 | 98.99 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 98.99 | gold quality |
| endothelial cell | CL:0000115 | 98.98 | gold quality |
| right lung | UBERON:0002167 | 98.98 | gold quality |
| adrenal gland | UBERON:0002369 | 98.98 | gold quality |
| type B pancreatic cell | CL:0000169 | 98.97 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 98.97 | gold quality |
| right coronary artery | UBERON:0001625 | 98.97 | gold quality |
| cerebellar cortex | UBERON:0002129 | 98.97 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 98.97 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 98.96 | gold quality |
| ovary | UBERON:0000992 | 98.95 | gold quality |
| coronary artery | UBERON:0001621 | 98.94 | gold quality |
| spleen | UBERON:0002106 | 98.94 | gold quality |
| parietal pleura | UBERON:0002400 | 98.94 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 98.94 | gold quality |
| metanephros | UBERON:0000081 | 98.93 | gold quality |
| gall bladder | UBERON:0002110 | 98.93 | gold quality |
| ectocervix | UBERON:0012249 | 98.93 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 98.92 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 98.92 | gold quality |
| body of stomach | UBERON:0001161 | 98.91 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 98.91 | gold quality |
| seminal vesicle | UBERON:0000998 | 98.90 | gold quality |
| right uterine tube | UBERON:0001302 | 98.90 | gold quality |
| cortical plate | UBERON:0005343 | 98.90 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 98.88 | gold quality |
| thyroid gland | UBERON:0002046 | 98.87 | gold quality |
| adrenal tissue | UBERON:0018303 | 98.87 | gold quality |
| rectum | UBERON:0001052 | 98.86 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 98.86 | gold quality |
| vagina | UBERON:0000996 | 98.85 | gold quality |
| lymph node | UBERON:0000029 | 98.84 | gold quality |
| adipose tissue | UBERON:0001013 | 98.84 | gold quality |
| transverse colon | UBERON:0001157 | 98.84 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 98.84 | gold quality |
| right frontal lobe | UBERON:0002810 | 98.84 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 98.84 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 98.84 | gold quality |
| pleura | UBERON:0000977 | 98.83 | gold quality |
| peritoneum | UBERON:0002358 | 98.83 | gold quality |
| periodontal ligament | UBERON:0008266 | 98.83 | gold quality |
| omental fat pad | UBERON:0010414 | 98.83 | gold quality |
| prefrontal cortex | UBERON:0000451 | 98.82 | gold quality |
| minor salivary gland | UBERON:0001830 | 98.82 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 98.81 | gold quality |
| esophagus | UBERON:0001043 | 98.80 | gold quality |
| placenta | UBERON:0001987 | 98.80 | gold quality |
| vermiform appendix | UBERON:0001154 | 98.79 | gold quality |
| connective tissue | UBERON:0002384 | 98.79 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 98.79 | gold quality |
| stromal cell of endometrium | CL:0002255 | 98.78 | gold quality |
| bronchial epithelial cell | CL:0002328 | 98.77 | gold quality |
| apex of heart | UBERON:0002098 | 98.77 | gold quality |
| right atrium auricular region | UBERON:0006631 | 98.77 | gold quality |
| upper lobe of lung | UBERON:0008948 | 98.77 | gold quality |
| body of pancreas | UBERON:0001150 | 98.76 | gold quality |
Single-cell (SCXA)
Detected in 5 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-111727 | yes | 1462.91 |
| E-MTAB-7008 | yes | 1306.66 |
| E-MTAB-8559 | yes | 556.85 |
| E-MTAB-6379 | no | 1679.10 |
| E-ANND-3 | no | 0.00 |
HPA expression
RNA tissue specificity: Low tissue specificity
showing 60 of 80 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Liver | tissue | 247.3 | medium |
| Heart muscle | tissue | 226.5 | medium |
| Tongue | tissue | 221.1 | |
| Tonsil | tissue | 220.4 | low |
| Thymus | tissue | 217.5 | |
| Epididymis | tissue | 212.8 | medium |
| Parathyroid gland | tissue | 205.3 | not detected |
| Ovary | tissue | 203.4 | low |
| Lymph node | tissue | 200.1 | low |
| Urinary bladder | tissue | 183.7 | medium |
| Seminal vesicle | tissue | 179.6 | |
| Smooth muscle | tissue | 179.0 | not detected |
| Skeletal muscle | tissue | 178.0 | not detected |
| Placenta | tissue | 175.8 | medium |
| Kidney | tissue | 173.9 | medium |
| Pituitary gland | tissue | 170.6 | |
| Fallopian tube | tissue | 167.7 | medium |
| Bone marrow | tissue | 163.1 | low |
| Breast | tissue | 160.6 | low |
| Salivary gland | tissue | 159.8 | not detected |
| Rectum | tissue | 156.2 | low |
| Adrenal gland | tissue | 154.2 | medium |
| Skin 1 | tissue | 153.8 | low |
| Vagina | tissue | 152.6 | not detected |
| Appendix | tissue | 147.8 | medium |
| Colon | tissue | 147.7 | low |
| Thyroid gland | tissue | 146.1 | low |
| Cervix | tissue | 143.3 | not detected |
| Frontal cortex | tissue | 142.7 | |
| Adipose tissue | tissue | 141.8 | low |
| Duodenum | tissue | 141.1 | medium |
| Esophagus | tissue | 139.7 | low |
| Prostate | tissue | 139.0 | medium |
| Pancreas | tissue | 135.5 | medium |
| Small intestine | tissue | 133.7 | medium |
| Gallbladder | tissue | 130.4 | not detected |
| Caudate putamen | tissue | 130.3 | |
| Spleen | tissue | 129.7 | low |
| Spinal cord | tissue | 125.5 | |
| Endometrium 1 | tissue | 124.7 | medium |
| Superior colliculi | tissue | 122.6 | |
| Pons | tissue | 121.6 | |
| Lung | tissue | 118.6 | high |
| Thalamus | tissue | 118.3 | |
| Locus coeruleus | tissue | 117.8 | |
| Medulla oblongata | tissue | 113.7 | |
| Midbrain | tissue | 112.2 | |
| Stomach 1 | tissue | 105.3 | high |
| Substantia nigra | tissue | 105.2 | |
| Hippocampal formation | tissue | 100.3 | |
| Hypothalamus | tissue | 98.9 | |
| Choroid plexus | tissue | 97.8 | |
| Corpus callosum | tissue | 94.3 | |
| Nucleus accumbens | tissue | 89.8 | |
| Septum | tissue | 89.0 | |
| Cerebral cortex | tissue | 87.5 | medium |
| Retina | tissue | 87.5 | |
| Somatosensory cortex | tissue | 87.5 | |
| Putamen | tissue | 85.8 | |
| Periaqueductal gray | tissue | 84.9 |
Brain sub-regions (HPA Brain Atlas): detected in 192; highest nTPM — Blood vessel (225.3), Lateral funiculus (white matter) (132.8), Ventral spinal cord (125.5), Anterior funiculus (white matter) (124.2), Lateral hypothalamic area (121.7).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting PSMB4 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
13 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-548AT-5P | 99.96 | 70.83 | 2666 |
| HSA-MIR-4699-3P | 99.71 | 70.15 | 3142 |
| HSA-MIR-4480 | 99.42 | 66.02 | 735 |
| HSA-MIR-10522-5P | 99.26 | 68.50 | 2087 |
| HSA-MIR-3973 | 99.20 | 69.19 | 1990 |
| HSA-MIR-520G-3P | 98.91 | 67.38 | 1914 |
| HSA-MIR-520H | 98.91 | 67.38 | 1914 |
| HSA-MIR-4782-5P | 98.35 | 69.33 | 1474 |
| HSA-MIR-5706 | 98.35 | 69.33 | 1463 |
| HSA-MIR-4277 | 98.34 | 67.17 | 1323 |
| HSA-MIR-5007-5P | 97.95 | 64.71 | 614 |
Functional genomics
gnomAD constraint: pLI 0.128, LOEUF 0.659, missense Z 0.796 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000290541 — one region, missense o/e 0.95.
DepMap (CRISPR cell-line fitness): dependent in 100.0% of screened cell lines, common-essential.
Most-dependent cell lines (DepMap gene-effect, lower = stronger; ≤ −0.5 shown): Panc 08.13 (-3.884), HCC1937 (-3.522), Panc 10.05 (-3.454), SW837 (-3.33), OUMS-23 (-3.313), OE33 (-3.295), OCI-LY-19 (-3.258), S-117 (-3.2), HT-144 (-3.195), AsPC-1 (-3.191), RPMI-7951 (-3.177), CAL-120 (-3.149), HUP-T3 (-3.14), NCI-H520 (-3.133), NCI-H1650 (-3.099).
Literature-anchored findings (GeneRIF, showing 10)
- While 26 proteasome dysfunction is observed in Parkinson’s disease (PD), diverse mutations in the parkin gene are linked to early-onset autosomal-recessive forms of familial PD. (PMID:20810900)
- proteasome subunit beta type 4 (PSMB4), the beta7 subunit of the 20S core complex, was identified as a direct binding partner of CRBN. (PMID:23026050)
- Data indicate that recruitment of proteasomes into mutant huntingtin (mHTT) protein initiated inclusion bodies (IBs) was observed when the PSMB4-GFP was co-expressed with mHTT. (PMID:24291262)
- Taken together, our results demonstrated that PSMB4 regulated MM cell growth in part by activating NF-kappaB-miR-21 signaling, which may represent promising targets for novel specific therapies. (PMID:25656574)
- Our findings implied that PSMB4 is involved in the progression of EOC (epithelial ovarian cancer) and could serve as potential therapeutical target of EOC. These data suggested that PSMB4 may promote cell proliferation via the NF-kappaB-target gene in EOC (epithelial ovarian cancer) (PMID:26439929)
- We further identified miR-148b as a negative regulator of proteasome beta-4 subunit. Enforced expression of miR-148b resulted in vitro growth inhibition of melanoma cells, whereas this inhibition was further abolished by enforced expression of proteasome beta-4 subunit (PMID:28656878)
- PSMB4 knockdown decreased the expression levels of MMP2, MMP9 and cathepsin B and decreased proliferation, migration and invasion abilities in human GBM cells. (PMID:29414809)
- High PSMB4 expression is associated with breast cancer. (PMID:30066880)
- FoxM1 transcriptionally activates the PSMB4 expression level in cervical cancer cells. (PMID:31699366)
- Bassoon inhibits proteasome activity via interaction with PSMB4. (PMID:32651614)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | psmb4 | ENSDARG00000054696 |
| mus_musculus | Psmb4 | ENSMUSG00000005779 |
| rattus_norvegicus | Psmb4 | ENSRNOG00000020979 |
| drosophila_melanogaster | Prosbeta7 | FBGN0250746 |
| caenorhabditis_elegans | pbs-7 | WBGENE00003953 |
Paralogs (18): PSMB1 (ENSG00000008018), PSMA4 (ENSG00000041357), PSMA3 (ENSG00000100567), PSMB5 (ENSG00000100804), PSMA6 (ENSG00000100902), PSMA7 (ENSG00000101182), PSMA2 (ENSG00000106588), PSMB2 (ENSG00000126067), PSMA1 (ENSG00000129084), PSMB7 (ENSG00000136930), PSMB6 (ENSG00000142507), PSMA5 (ENSG00000143106), PSMA8 (ENSG00000154611), PSMB8 (ENSG00000204264), PSMB10 (ENSG00000205220), PSMB11 (ENSG00000222028), PSMB9 (ENSG00000240065), PSMB3 (ENSG00000277791)
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Bos taurus | Q3T108 | 95.1% | Diamond |
| Sus scrofa | Q29384 | 93.5% | Diamond |
| Xenopus laevis | P28024 | 74.2% | Diamond |
| Dictyostelium discoideum | Q556Q0 | 48.8% | Diamond |
| Arabidopsis thaliana | Q7DLR9 | 48.8% | Diamond |
| Schizosaccharomyces pombe 972h- | Q9USQ9 | 47.3% | Diamond |
| Saccharomyces cerevisiae S288C | P30657 | 46.9% | Diamond |
| Encephalitozoon cuniculi GB-M1 | Q8SS01 | 37.8% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| POGZ | protein-coding | 23126 |
| CGN | protein-coding | 57530 |
| MIR554 | ncRNA | 693139 |
| TUFT1 | protein-coding | 7286 |
| SELENBP1 | protein-coding | 8991 |
| ZNF687-AS1 | ncRNA | 100507670 |
| PI4KB | protein-coding | 5298 |
| ZNF687 | protein-coding | 57592 |
| RFX5 | protein-coding | 5993 |
| RFX5-AS1 | ncRNA | 101927886 |
Protein
Protein identifiers
Proteasome subunit beta type-4 — P28070 (reviewed: P28070)
Alternative names: 26 kDa prosomal protein, Macropain beta chain, Multicatalytic endopeptidase complex beta chain, Proteasome beta chain, Proteasome chain 3, Proteasome subunit beta-7
All UniProt accessions (2): P28070, A0A140VK46
UniProt curated annotations — full annotation on UniProt →
Function. Non-catalytic component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). SMAD1/OAZ1/PSMB4 complex mediates the degradation of the CREBBP/EP300 repressor SNIP1.
Subunit / interactions. The 26S proteasome consists of a 20S proteasome core and two 19S regulatory subunits. The 20S proteasome core is a barrel-shaped complex made of 28 subunits that are arranged in four stacked rings. The two outer rings are each formed by seven alpha subunits, and the two inner rings are formed by seven beta subunits. The proteolytic activity is exerted by three beta-subunits PSMB5, PSMB6 and PSMB7. Forms a ternary complex with SMAD1 and OAZ1 before PSMB4 is incorporated into the 20S proteasome. Interacts with PRPF19. (Microbial infection) Interacts with HTLV-1 Tax protein. (Microbial infection) Interacts with HIV-1 Nef and Tat proteins.
Subcellular location. Cytoplasm. Nucleus.
Disease relevance. Proteasome-associated autoinflammatory syndrome 3 (PRAAS3) [MIM:617591] An autoinflammatory disorder characterized by onset in early infancy and recurrent fever, nodular dermatitis, myositis, panniculitis-induced lipodystrophy, lymphadenopathy, and immune dysregulation. Variable accompanying features may include joint contractures, hepatosplenomegaly, anemia, thrombocytopenia, recurrent infections, autoantibodies, and hypergammaglobulinemia. Some patients may have intracranial calcifications. PRAAS3 inheritance is autosomal recessive or digenic. The disease is caused by variants affecting distinct genetic loci, including the gene represented in this entry.
Induction. Up-regulated in fibrolamellar carcinomas.
Similarity. Belongs to the peptidase T1B family.
RefSeq proteins (1): NP_002787* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001353 | Proteasome_sua/b | Family |
| IPR016050 | Proteasome_bsu_CS | Conserved_site |
| IPR016295 | Proteasome_beta4 | Family |
| IPR023333 | Proteasome_suB-type | Family |
| IPR029055 | Ntn_hydrolases_N | Homologous_superfamily |
Pfam: PF00227
UniProt features (34 total): strand 17, helix 7, sequence variant 4, modified residue 3, propeptide 1, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
showing 30 of 150 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 5LE5 | Native human 20S proteasome at 1.8 Angstrom | X-RAY DIFFRACTION | 1.8 |
| 5LEY | Human 20S proteasome complex with Oprozomib at 1.9 Angstrom | X-RAY DIFFRACTION | 1.9 |
| 5LF4 | Human 20S proteasome complex with Delanzomib at 2.0 Angstrom | X-RAY DIFFRACTION | 1.99 |
| 5LF1 | Human 20S proteasome complex with Dihydroeponemycin at 2.0 Angstrom | X-RAY DIFFRACTION | 2 |
| 5LF7 | Human 20S proteasome complex with Ixazomib at 2.0 Angstrom | X-RAY DIFFRACTION | 2 |
| 8UD9 | Structure of human constitutive 20S proteasome complexed with the inhibitor TDI-8304 | ELECTRON MICROSCOPY | 2.04 |
| 5LF6 | Human 20S proteasome complex with Z-LLY-ketoaldehyde at 2.1 Angstrom | X-RAY DIFFRACTION | 2.07 |
| 5LF3 | Human 20S proteasome complex with Bortezomib at 2.1 Angstrom | X-RAY DIFFRACTION | 2.1 |
| 8BZL | Human 20S Proteasome in complex with peptide activator peptide BLM42 | X-RAY DIFFRACTION | 2.14 |
| 5LEZ | Human 20S proteasome complex with Oprozomib in Mg-Acetate at 2.2 Angstrom | X-RAY DIFFRACTION | 2.19 |
| 5LEX | Native human 20S proteasome in Mg-Acetate at 2.2 Angstrom | X-RAY DIFFRACTION | 2.2 |
| 7AWE | HUMAN IMMUNOPROTEASOME 20S PARTICLE IN COMPLEX WITH … | X-RAY DIFFRACTION | 2.29 |
| 5LF0 | Human 20S proteasome complex with Epoxomicin at 2.4 Angstrom | X-RAY DIFFRACTION | 2.41 |
| 7B12 | HUMAN IMMUNOPROTEASOME 20S PARTICLE IN COMPLEX WITH … | X-RAY DIFFRACTION | 2.43 |
| 9K53 | Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED2.1 | ELECTRON MICROSCOPY | 2.5 |
| 9HMN | CryoEM structure of human 20S proteasome in complex with proteasome inhibitor … | ELECTRON MICROSCOPY | 2.55 |
| 4R3O | Human Constitutive 20S Proteasome | X-RAY DIFFRACTION | 2.6 |
| 6RGQ | Human 20S Proteasome | ELECTRON MICROSCOPY | 2.6 |
| 9YUZ | Structure of the human 20S proteasome in complex with a beta5-selective covalent … | ELECTRON MICROSCOPY | 2.6 |
| 8CVR | Human 20S proteasome with MG-132 | ELECTRON MICROSCOPY | 2.7 |
| 6KWY | human PA200-20S complex | ELECTRON MICROSCOPY | 2.72 |
| 9MBP | Substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral … | ELECTRON MICROSCOPY | 2.75 |
| 6E5B | Human Immunoproteasome 20S particle in complex with compound 1 | X-RAY DIFFRACTION | 2.77 |
| 7NAN | Human 20S proteasome core particle | ELECTRON MICROSCOPY | 2.8 |
| 8TM6 | Human premature 20S proteasome assembly intermediate | ELECTRON MICROSCOPY | 2.8 |
| 9NKG | Structure of substrate engaged MIDN-bound human 26S proteasome, EB-MIDN (Composite map) | ELECTRON MICROSCOPY | 2.8 |
| 8QYO | Human proteasome 20S core particle | ELECTRON MICROSCOPY | 2.84 |
| 8QYN | Human 20S proteasome assembly intermediate structure 5 | ELECTRON MICROSCOPY | 2.88 |
| 4R67 | Human constitutive 20S proteasome in complex with carfilzomib | X-RAY DIFFRACTION | 2.89 |
| 7NAO | Human PA28-20S proteasome complex | ELECTRON MICROSCOPY | 2.9 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P28070-F1 | 87.70 | 0.81 |
Human Protein Atlas
Protein class: Enzymes, Peptidases, Threonine-type peptidases, Predicted intracellular proteins, Plasma proteins, Disease related genes, Potential drug targets, Human disease related genes, Essential proteins
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): nucleoplasm; mitochondria
Antibody reliability (HPA): IH approved · IF supported
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (3)
| Type | Positions |
|---|---|
| N-acetylmethionine | 1 |
| Phosphoserine | 26 |
| Phosphotyrosine | 102 |
Function
Pathways and Gene Ontology
Reactome pathways
57 curated (TAS) of 172; 13 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
showing 60 of 172 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-5678895 | Defective CFTR causes cystic fibrosis ⚕ | curated |
| R-HSA-5362768 | Hh mutants are degraded by ERAD ⚕ | curated |
| R-HSA-180585 | Vif-mediated degradation of APOBEC3G ⚕ | curated |
| R-HSA-180534 | Vpu mediated degradation of CD4 ⚕ | curated |
| R-HSA-382556 | ABC-family protein mediated transport | curated |
| R-HSA-9931269 | AMPK-induced ERAD and lysosome mediated degradation of PD-L1(CD274) | curated |
| R-HSA-174154 | APC/C:Cdc20 mediated degradation of Securin | curated |
| R-HSA-174178 | APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 | curated |
| R-HSA-450408 | AUF1 (hnRNP D0) binds and destabilizes mRNA | curated |
| R-HSA-1169091 | Activation of NF-kappaB in B cells | curated |
| R-HSA-9912633 | Antigen processing: Ub, ATP-independent proteasomal degradation | curated |
| R-HSA-983168 | Antigen processing: Ubiquitination & Proteasome degradation | curated |
| R-HSA-68867 | Assembly of the pre-replicative complex | curated |
| R-HSA-4608870 | Asymmetric localization of PCP proteins | curated |
| R-HSA-174084 | Autodegradation of Cdh1 by Cdh1:APC/C | curated |
| R-HSA-349425 | Autodegradation of the E3 ubiquitin ligase COP1 | curated |
| R-HSA-69017 | CDK-mediated phosphorylation and removal of Cdc6 | curated |
| R-HSA-5607764 | CLEC7A (Dectin-1) signaling | curated |
| R-HSA-174184 | Cdc20:Phospho-APC/C mediated degradation of Cyclin A | curated |
| R-HSA-5607761 | Dectin-1 mediated noncanonical NF-kB signaling | curated |
| R-HSA-4641257 | Degradation of AXIN | curated |
| R-HSA-9766229 | Degradation of CDH1 | curated |
| R-HSA-4641258 | Degradation of DVL | curated |
| R-HSA-5610780 | Degradation of GLI1 by the proteasome | curated |
| R-HSA-195253 | Degradation of beta-catenin by the destruction complex | curated |
| R-HSA-202424 | Downstream TCR signaling | curated |
| R-HSA-8854050 | FBXL7 down-regulates AURKA during mitotic entry and in early mitosis | curated |
| R-HSA-2871837 | FCERI mediated NF-kB activation | curated |
| R-HSA-69481 | G2/M Checkpoints | curated |
| R-HSA-5610785 | GLI3 is processed to GLI3R by the proteasome | curated |
| R-HSA-9762114 | GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2 | curated |
| R-HSA-9929356 | GSK3B-mediated proteasomal degradation of PD-L1(CD274) | curated |
| R-HSA-5632684 | Hedgehog ‘on’ state | curated |
| R-HSA-5358346 | Hedgehog ligand biogenesis | curated |
| R-HSA-9020702 | Interleukin-1 signaling | curated |
| R-HSA-9755511 | KEAP1-NFE2L2 pathway | curated |
| R-HSA-5687128 | MAPK6/MAPK4 signaling | curated |
| R-HSA-5676590 | NIK–>noncanonical NF-kB signaling | curated |
| R-HSA-8951664 | Neddylation | curated |
| R-HSA-9974237 | Negative Regulation of DNA Double Strand Break Response | curated |
| R-HSA-68949 | Orc1 removal from chromatin | curated |
| R-HSA-1234176 | Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha | curated |
| R-HSA-8939236 | RUNX1 regulates transcription of genes involved in differentiation of HSCs | curated |
| R-HSA-8948751 | Regulation of PTEN stability and activity | curated |
| R-HSA-5658442 | Regulation of RAS by GAPs | curated |
| R-HSA-8941858 | Regulation of RUNX3 expression and activity | curated |
| R-HSA-350562 | Regulation of ornithine decarboxylase (ODC) | curated |
| R-HSA-187577 | SCF(Skp2)-mediated degradation of p27/p21 | curated |
| R-HSA-174113 | SCF-beta-TrCP mediated degradation of Emi1 | curated |
| R-HSA-9929491 | SPOP-mediated proteasomal degradation of PD-L1(CD274) | curated |
| R-HSA-2467813 | Separation of Sister Chromatids | curated |
| R-HSA-5668541 | TNFR2 non-canonical NF-kB pathway | curated |
| R-HSA-8852276 | The role of GTSE1 in G2/M progression after G2 checkpoint | curated |
| R-HSA-5689603 | UCH proteinases | curated |
| R-HSA-5689880 | Ub-specific processing proteases | curated |
| R-HSA-69601 | Ubiquitin-Mediated Degradation of Phosphorylated Cdc25A | curated |
| R-HSA-75815 | Ubiquitin-dependent degradation of Cyclin D | curated |
| R-HSA-5619084 | ABC transporter disorders ⚕ | — |
| R-HSA-1643685 | Disease ⚕ | — |
| R-HSA-5663202 | Diseases of signal transduction by growth factor receptors and second messengers ⚕ | — |
MSigDB gene sets: 542 (showing top):
GSE45365_NK_CELL_VS_CD8A_DC_MCMV_INFECTION_DN, MORF_MTA1, GOBP_REGULATION_OF_CELL_ACTIVATION, REACTOME_DNA_REPLICATION, REACTOME_SIGNALING_BY_NOTCH, REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1, GOBP_NEGATIVE_REGULATION_OF_CELL_DEVELOPMENT, JI_RESPONSE_TO_FSH_UP, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_REGULATION_OF_INFLAMMATORY_RESPONSE_TO_ANTIGENIC_STIMULUS, MORF_MBD4, MORF_RAB5A, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_INFLAMMATORY_RESPONSE
GO Biological Process (25): immune system process (GO:0002376), negative regulation of inflammatory response to antigenic stimulus (GO:0002862), DNA repair (GO:0006281), apoptotic process (GO:0006915), DNA damage response (GO:0006974), response to oxidative stress (GO:0006979), spermatogenesis (GO:0007283), proteasomal protein catabolic process (GO:0010498), proteasomal ubiquitin-independent protein catabolic process (GO:0010499), flagellated sperm motility (GO:0030317), positive regulation of type II interferon production (GO:0032729), positive regulation of interleukin-2 production (GO:0032743), positive regulation of tumor necrosis factor production (GO:0032760), response to type II interferon (GO:0034341), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), CD8-positive, alpha-beta T cell differentiation (GO:0043374), thymic T cell selection (GO:0045061), T-helper 1 cell differentiation (GO:0045063), negative regulation of regulatory T cell differentiation (GO:0045590), meiotic cell cycle (GO:0051321), regulation of proteasomal protein catabolic process (GO:0061136), cellular response to type I interferon (GO:0071357), T-helper 17 cell differentiation (GO:0072539), CD8-positive, alpha-beta T cell homeostasis (GO:0160165), regulation of G1/S transition of mitotic cell cycle (GO:2000045)
GO Molecular Function (2): lipopolysaccharide binding (GO:0001530), protein binding (GO:0005515)
GO Cellular Component (11): proteasome complex (GO:0000502), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), cytosol (GO:0005829), proteasome core complex (GO:0005839), synaptic vesicle (GO:0008021), proteasome core complex, beta-subunit complex (GO:0019774), proteasome storage granule (GO:0034515), ciliary basal body (GO:0036064), extracellular exosome (GO:0070062)
Reactome top-level categories
18 top-level categories:
| Category | Pathways |
|---|---|
| Antigen processing-Cross presentation | 2 |
| APC/C-mediated degradation of cell cycle proteins | 2 |
| Host Interactions of HIV factors | 2 |
| Downstream signaling events of B Cell Receptor (BCR) | 1 |
| Cellular response to hypoxia | 1 |
| Regulation of APC/C activators between G1/S and early anaphase | 1 |
| APC/C:Cdc20 mediated degradation of mitotic proteins | 1 |
| APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint | 1 |
| Cyclin E associated events during G1/S transition | 1 |
| Cyclin A:Cdk2-associated events at S phase entry | 1 |
| Signaling by WNT | 1 |
| TCR signaling | 1 |
| Regulation of Apoptosis | 1 |
| Mitotic Anaphase | 1 |
| Fc epsilon receptor (FCERI) signaling | 1 |
| Stabilization of p53 | 1 |
| Metabolism of polyamines | 1 |
| Transport of small molecules | 1 |
GO top-level categories
showing 60 of 65 GO namespaces:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| proteasomal protein catabolic process | 2 |
| positive regulation of cytokine production | 2 |
| intracellular protein-containing complex | 2 |
| intracellular anatomical structure | 2 |
| cytoplasm | 2 |
| biological_process | 1 |
| inflammatory response to antigenic stimulus | 1 |
| regulation of inflammatory response to antigenic stimulus | 1 |
| negative regulation of inflammatory response | 1 |
| negative regulation of immune response | 1 |
| DNA metabolic process | 1 |
| DNA damage response | 1 |
| programmed cell death | 1 |
| apoptotic signaling pathway | 1 |
| execution phase of apoptosis | 1 |
| cellular response to stress | 1 |
| response to stress | 1 |
| developmental process involved in reproduction | 1 |
| male gamete generation | 1 |
| protein catabolic process | 1 |
| cilium-dependent cell motility | 1 |
| cilium movement involved in cell motility | 1 |
| sperm motility | 1 |
| type II interferon production | 1 |
| regulation of type II interferon production | 1 |
| interleukin-2 production | 1 |
| regulation of interleukin-2 production | 1 |
| tumor necrosis factor production | 1 |
| regulation of tumor necrosis factor production | 1 |
| positive regulation of tumor necrosis factor superfamily cytokine production | 1 |
| response to cytokine | 1 |
| innate immune response | 1 |
| ubiquitin-dependent protein catabolic process | 1 |
| CD8-positive, alpha-beta T cell activation | 1 |
| alpha-beta T cell differentiation | 1 |
| T cell differentiation in thymus | 1 |
| T cell selection | 1 |
| alpha-beta T cell activation involved in immune response | 1 |
| T cell differentiation involved in immune response | 1 |
| T-helper 1 type immune response | 1 |
| T-helper cell differentiation | 1 |
| regulatory T cell differentiation | 1 |
| negative regulation of T cell differentiation | 1 |
| regulation of regulatory T cell differentiation | 1 |
| cell cycle | 1 |
| sexual reproduction | 1 |
| reproductive process | 1 |
| meiotic nuclear division | 1 |
| lipid binding | 1 |
| carbohydrate derivative binding | 1 |
| binding | 1 |
| endopeptidase complex | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| proteasome complex | 1 |
| catalytic complex | 1 |
| exocytic vesicle | 1 |
| presynapse | 1 |
| proteasome core complex | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 11 of 39 annotations. The rest are phylogenetic / computational / electronic (IEA).
11 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| proteasomal protein catabolic process | BP | direct assay |
| proteasome-mediated ubiquitin-dependent protein catabolic process | BP | direct assay |
| regulation of proteasomal protein catabolic process | BP | direct assay |
| response to oxidative stress | BP | direct assay |
| ciliary basal body | CC | direct assay |
| cytoplasm | CC | direct assay |
| extracellular exosome | CC | high-throughput assay |
| nucleoplasm | CC | direct assay |
| nucleus | CC | direct assay |
| proteasome complex | CC | direct assay |
| proteasome core complex | CC | direct assay |
Protein interactions and networks
STRING
showing 15 of 2,564 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PSMB4 | PSMB2 | P31145 | 977 |
| PSMB4 | PSMB3 | P31147 | 957 |
| PSMB4 | PSMB5 | P28074 | 913 |
| PSMB4 | PSMB9 | P28065 | 887 |
| PSMB4 | PSMA3 | P25788 | 812 |
| PSMB4 | PSMB1 | P20618 | 762 |
| PSMB4 | PSMA1 | P25786 | 728 |
| PSMB4 | PSMA6 | P34062 | 712 |
| PSMB4 | PSMA5 | P28066 | 711 |
| PSMB4 | PSMB6 | P28072 | 706 |
| PSMB4 | PSMC2 | P35998 | 702 |
| PSMB4 | PSMA4 | P25789 | 697 |
| PSMB4 | POMP | Q9Y244 | 686 |
| PSMB4 | PSMB7 | Q99436 | 682 |
| PSMB4 | LTAP1 | Q9BWL3 | 674 |
IntAct
Human interaction partners of PSMB4 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
showing 30 of 48 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| PSMB1 | physical association | 0.800 | 5 |
| PSMB7 | physical association | 0.800 | 2 |
| POMP | physical association | 0.750 | 1 |
| PSMA7 | association | 0.730 | 2 |
| SMAD1 | physical association | 0.670 | 4 |
| PSMA3 | physical association | 0.670 | 3 |
| PSMB5 | physical association | 0.660 | 1 |
| ATXN1 | physical association | 0.560 | 6 |
| TLE5 | physical association | 0.560 | 5 |
| AIRIM | physical association | 0.560 | 3 |
| BCL6 | physical association | 0.560 | 3 |
| CCDC57 | physical association | 0.560 | 3 |
| CNOT2 | physical association | 0.560 | 3 |
| DTX2 | physical association | 0.560 | 3 |
| FSD2 | physical association | 0.560 | 3 |
| GABARAPL1 | physical association | 0.560 | 3 |
| GCA | physical association | 0.560 | 3 |
| HEMK1 | physical association | 0.560 | 3 |
| HGS | physical association | 0.560 | 3 |
| KANK2 | physical association | 0.560 | 3 |
| KRTAP19-5 | physical association | 0.560 | 3 |
| MYOZ3 | physical association | 0.560 | 3 |
| P4HA3 | physical association | 0.560 | 3 |
| PFDN5 | physical association | 0.560 | 3 |
| PITX2 | physical association | 0.560 | 3 |
| PKN1 | physical association | 0.560 | 3 |
| PRKN | physical association | 0.560 | 3 |
| PROP1 | physical association | 0.560 | 3 |
| RNF11 | physical association | 0.560 | 3 |
| SOHLH1 | physical association | 0.560 | 3 |
BioGRID (519 interactions; top human partners by supporting records): PSMB7 (Affinity Capture-MS; 20 records), PSMA2 (Affinity Capture-MS; 14 records), PSMB1 (Affinity Capture-MS; 12 records), PSMA4 (Affinity Capture-MS; 11 records), PSMA1 (Affinity Capture-MS; 10 records), PSMA3 (Two-hybrid; 10 records), PSMA5 (Affinity Capture-MS; 10 records), PSMB5 (Affinity Capture-MS; 10 records), PSMA6 (Affinity Capture-MS; 9 records), PSMA7 (Affinity Capture-MS; 9 records), PSMB2 (Affinity Capture-MS; 9 records), PSMB3 (Affinity Capture-MS; 9 records), PSMB6 (Affinity Capture-MS; 9 records), PSMD14 (Co-fractionation; 8 records), FBXO7 (Affinity Capture-MS; 6 records)
SIGNOR signaling
1 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| PSMB4 | “form complex” | “26S Proteasome” | binding |
Protein complexes (CORUM) (5)
Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).
5 complexes by size:
| Complex | Subunits | Members |
|---|---|---|
| ★ PA700-20S-PA28 complex | 36 | PSMA5, PSMD4, PSMD6, PSMD9, PSME1, PSME2, PSMD11, PSMB1, PSMB4, PSMC1, PSMA3, PSMB5, PSMD10, PSMA7, PSMC5, PSMD14, PSMD7, PSMA6, PSMB6, PSMD12, PSMD3, PSMD1, PSMA4, PSMB7, PSMC3, PSMC4, PSMC6, PSMD8, PSMB3, PSMC2, PSMD13, PSMA1, PSMA2, PSMB2, PSMD2, PSMD5 |
| ★ 26S proteasome | 22 | PSMA2, PSMA7, PSMB3, PSMA5, PSMA6, PSMB4, PSMB7, PSMC1, PSMC2, PSMC5, PSMC6, PSMA3, PSMB2, PSMB5, PSMC3, PSMC4, PSMD13, PSMD4, PSMA1, PSMA4, PSMB1, PSMB6 |
| ★ PA28-20S proteasome | 16 | PSMA6, PSMB5, PSMA2, PSMA7, PSMB2, PSMB4, PSME1, PSMA3, PSMB1, PSMB3, PSMB6, PSME2, PSMA1, PSMA5, PSMB7, PSMA4 |
| ★ PA28gamma-20S proteasome | 15 | PSMB5, PSMA5, PSMB1, PSMB4, PSME3, PSMA1, PSMA4, PSMA7, PSMB2, PSMA2, PSMA3, PSMB6, PSMB7, PSMA6, PSMB3 |
| ★ 20S proteasome | 14 | PSMA5, PSMA6, PSMB1, PSMB6, PSMA2, PSMA7, PSMB2, PSMB3, PSMB4, PSMB5, PSMB7, PSMA1, PSMA3, PSMA4 |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 48 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Antigen processing: Ub, ATP-independent proteasomal degradation | 5 | 92.1× | 8e-09 |
| Regulation of activated PAK-2p34 by proteasome mediated degradation | 7 | 62.9× | 5e-10 |
| Regulation of ornithine decarboxylase (ODC) | 7 | 61.4× | 5e-10 |
| Vpu mediated degradation of CD4 | 7 | 60.0× | 5e-10 |
| Autodegradation of the E3 ubiquitin ligase COP1 | 7 | 60.0× | 5e-10 |
| Ubiquitin-dependent degradation of Cyclin D | 7 | 60.0× | 5e-10 |
| Cross-presentation of soluble exogenous antigens (endosomes) | 7 | 57.3× | 5e-10 |
| Vif-mediated degradation of APOBEC3G | 7 | 57.3× | 5e-10 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| proteasome-mediated ubiquitin-dependent protein catabolic process | 8 | 9.5× | 7e-04 |
Disease & clinical
Genetic variants
Variant evidence for PSMB4: 300 ClinVar records (2 pathogenic / likely pathogenic); 2 GWAS associations. Per-variant detail is on Sugi Variant.
ClinVar
300 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 2 |
| Likely pathogenic | 0 |
| Uncertain significance | 157 |
| Likely benign | 105 |
| Benign | 8 |
Top pathogenic / likely-pathogenic (2)
Showing all 2 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 548955 | NM_002796.3(PSMB4):c.636_644del (p.Asp212_Val214del) | Pathogenic | no assertion criteria provided | 1 |
| 548958 | NM_002796.3(PSMB4):c.666C>A (p.Tyr222Ter) | Pathogenic | no assertion criteria provided | 1 |
Per-variant reference — Sugi Variant
Explore PSMB4’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 23 predictions of 339):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 1:151399980 | acceptor_loss | 1.0000 | |
| 1:151400188–151400189 | donor_loss | 1.0000 | 5 |
| 1:151400232 | donor_gain | 1.0000 | |
| 1:151401631–151401632 | donor_loss | 1.0000 | 4 |
| 1:151399728–151399729 | donor_loss | 0.9900 | 6 |
| 1:151399973 | acceptor_gain | 0.9900 | |
| 1:151399979 | acceptor_loss | 0.9900 | 2 |
| 1:151400168 | donor_gain | 0.9900 | |
| 1:151400189 | donor_loss | 0.9900 | |
| 1:151400209 | donor_gain | 0.9900 |
AlphaMissense
778 missense substitutions predicted likely pathogenic (of 1,700 scored), across 188 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D70 | 8 | 0.995 | 0.999 |
| D104 | 8 | 0.995 | 0.998 |
| D225 | 8 | 0.994 | 0.997 |
| D101 | 8 | 0.986 | 0.997 |
| D171 | 8 | 0.945 | 0.995 |
| D124 | 8 | 0.922 | 0.963 |
| N153 | 8 | 0.901 | 0.996 |
| W254 | 7 | 0.995 | 0.999 |
| F81 | 7 | 0.992 | 0.998 |
| W152 | 7 | 0.978 | 0.996 |
| F166 | 7 | 0.974 | 0.997 |
| W136 | 7 | 0.972 | 0.995 |
| F61 | 7 | 0.971 | 0.998 |
| F105 | 7 | 0.966 | 0.990 |
| F263 | 7 | 0.933 | 0.989 |
| H134 | 7 | 0.920 | 0.993 |
| Q106 | 7 | 0.907 | 0.987 |
| R139 | 7 | 0.897 | 0.953 |
| N91 | 7 | 0.850 | 0.992 |
| F232 | 7 | 0.838 | 0.982 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
4 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Breast Invasive Carcinoma (validation) | favorable | 6.5e-06 |
| Kidney Renal Clear Cell Carcinoma (validation) | unfavorable | 1.59e-05 |
| Liver Hepatocellular Carcinoma (TCGA) | unfavorable | 0.000422 |
| Kidney Renal Papillary Cell Carcinoma (TCGA) | unfavorable | 0.000514 |
Disease associations
OMIM: gene MIM:602177 | disease phenotypes: MIM:617591, MIM:256040
GenCC curated gene-disease
1 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| proteasome-associated autoinflammatory syndrome 3 | Limited | Autosomal recessive | 2 |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (5 panels, 3 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
5 panels:
| Panel | Rating |
|---|---|
| Autoinflammatory disorders | green |
| Childhood interstitial lung disease | green |
| Severe insulin resistance and lipodystrophy syndromes | green |
| COVID-19 research | amber |
| Primary immunodeficiency or monogenic inflammatory bowel disease | amber |
Mondo (2): proteasome-associated autoinflammatory syndrome 3 (MONDO:0054699), proteasome-associated autoinflammatory syndrome 1 (MONDO:0054698)
Orphanet (4): Nakajo-Nishimura syndrome (Orphanet:2615), Proteasome-associated autoinflammatory syndrome (Orphanet:324977), JMP syndrome (Orphanet:324999), CANDLE syndrome (Orphanet:325004)
HPO phenotypes
26 phenotypes (HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000246 | Sinusitis |
| HP:0000509 | Conjunctivitis |
| HP:0000956 | Acanthosis nigricans |
| HP:0000988 | Skin rash |
| HP:0001369 | Arthritis |
| HP:0001371 | Flexion contracture |
| HP:0001508 | Failure to thrive |
| HP:0001744 | Splenomegaly |
| HP:0001873 | Thrombocytopenia |
| HP:0001888 | Decreased total lymphocyte count |
| HP:0001903 | Anemia |
| HP:0001954 | Recurrent fever |
| HP:0002155 | Hypertriglyceridemia |
| HP:0002240 | Hepatomegaly |
| HP:0002716 | Lymphadenopathy |
| HP:0002719 | Recurrent infections |
| HP:0002829 | Arthralgia |
| HP:0002910 | Elevated circulating hepatic transaminase concentration |
| HP:0003565 | Elevated erythrocyte sedimentation rate |
| HP:0009125 | Lipodystrophy |
| HP:0010702 | Increased circulating immunoglobulin concentration |
| HP:0012490 | Panniculitis |
| HP:0025131 | Finger swelling |
| HP:0100539 | Periorbital edema |
| HP:0100614 | Myositis |
GWAS associations
2 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST002041_2 | Blood trace element (Cu levels) | 3e-20 |
| GCST005951_48 | Body mass index | 4e-9 |
EFO canonical traits (from GWAS)
2 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0005267 | serum copper measurement |
| EFO:0004340 | body mass index |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (3): CHEMBL2364701 (PROTEIN COMPLEX), CHEMBL3831201 (PROTEIN COMPLEX GROUP), CHEMBL4879435 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 43,320 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
5 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL325041 | BORTEZOMIB | 4 | 13,415 |
| CHEMBL451887 | CARFILZOMIB | 4 | 13,156 |
| CHEMBL2141296 | IXAZOMIB | 3 | 6,376 |
| CHEMBL371405 | MARIZOMIB | 3 | 7,520 |
| CHEMBL2103884 | OPROZOMIB | 2 | 2,853 |
PharmGKB: 1 entry (CPIC guideline: no)
PharmGKB variant annotations
Per-publication pharmacogenomic findings for this gene (significant associations).
1 published findings:
| Variant | Drug(s) | Category | Finding | PMID |
|---|---|---|---|---|
| rs2296840 | Other | Allele T is associated with increased risk of Depressive Disorder, Major. | PMID:18504423 |
Binding affinities (BindingDB)
151 measured of 196 human assays (196 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| Cinnabaramide G | IC50 | 0.6 nM |
| CHEMBL4102324 | IC50 | 0.92 nM |
| CINNABARAMIDE A | IC50 | 1 nM |
| MARIZOMIB | IC50 | 1.3 nM |
| CHEMBL4460323 | IC50 | 1.5 nM |
| Alpha-ketocarbonyl derivative | IC50 | 2 nM |
| (R)-3-methyl-1-((S)-3-phenyl-2-(pyrazine-6-carboxamido)propanamido)butylboronic acid | IC50 | 2.4 nM |
| CHEMBL4517600 | IC50 | 2.4 nM |
| CHEMBL4587036 | IC50 | 2.5 nM |
| CHEMBL4444107 | IC50 | 3.4 nM |
| CHEMBL5197285 | IC50 | 3.4 nM |
| CHEMBL4541038 | IC50 | 3.6 nM |
| CHEMBL4877708 | IC50 | 3.8 nM |
| CHEMBL4547405 | IC50 | 3.9 nM |
| CHEMBL5171225 | IC50 | 4 nM |
| CHEMBL4581126 | IC50 | 4.3 nM |
| CHEMBL4542373 | IC50 | 4.6 nM |
| CHEMBL4558648 | IC50 | 4.6 nM |
| CHEMBL4467618 | IC50 | 4.8 nM |
| CHEMBL5186240 | IC50 | 5.2 nM |
| Alpha-ketocarbonyl derivative | IC50 | 6 nM |
| Cinnabaramide F | IC50 | 6 nM |
| CHEMBL4447701 | IC50 | 6.4 nM |
| CHEMBL4435814 | IC50 | 6.4 nM |
| CHEMBL4436430 | IC50 | 6.5 nM |
| CHEMBL432281 | IC50 | 7 nM |
| CHEMBL5202627 | IC50 | 7 nM |
| CHEMBL5208573 | IC50 | 7.2 nM |
| CHEMBL4559271 | IC50 | 7.7 nM |
| CHEMBL5172645 | IC50 | 8.1 nM |
| CHEMBL5179570 | IC50 | 8.4 nM |
| CHEMBL5209077 | IC50 | 8.6 nM |
| CHEMBL5173459 | IC50 | 8.9 nM |
| CHEMBL5188065 | IC50 | 9.3 nM |
| CHEMBL5196378 | IC50 | 9.3 nM |
| CHEMBL4572638 | IC50 | 9.4 nM |
| CHEMBL5201055 | IC50 | 9.4 nM |
| CHEMBL4441018 | IC50 | 9.5 nM |
| Cinnabaramide C | IC50 | 12 nM |
| TP-103 | IC50 | 14 nM |
| CHEMBL4578081 | IC50 | 14 nM |
| MLN2238 | IC50 | 15 nM |
| CHEMBL4443333 | IC50 | 15 nM |
| CHEMBL4864661 | IC50 | 16 nM |
| CHEMBL4875208 | IC50 | 16 nM |
| CHEMBL4557130 | IC50 | 17 nM |
| CHEMBL27225 | IC50 | 18 nM |
| TP-108 | IC50 | 18 nM |
| CHEMBL2114122 | IC50 | 20 nM |
| TP-109 | IC50 | 20 nM |
ChEMBL bioactivities
313 potent at pChembl≥5 of 339 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.22 | IC50 | 0.6 | nM | CINNABARAMIDE G |
| 9.22 | Ki | 0.6 | nM | CHEMBL5624541 |
| 9.22 | Ki | 0.6 | nM | BORTEZOMIB |
| 9.04 | IC50 | 0.92 | nM | CHEMBL4102324 |
| 9.00 | IC50 | 1 | nM | CINNABARAMIDE A |
| 8.89 | IC50 | 1.3 | nM | MARIZOMIB |
| 8.82 | IC50 | 1.5 | nM | CHEMBL4460323 |
| 8.70 | IC50 | 2 | nM | CHEMBL307387 |
| 8.66 | IC50 | 2.2 | nM | CHEMBL5419917 |
| 8.62 | IC50 | 2.4 | nM | CHEMBL4517600 |
| 8.62 | IC50 | 2.4 | nM | BORTEZOMIB |
| 8.62 | IC50 | 2.4 | nM | CHEMBL5413513 |
| 8.60 | IC50 | 2.5 | nM | CHEMBL4587036 |
| 8.59 | IC50 | 2.56 | nM | BORTEZOMIB |
| 8.57 | IC50 | 2.7 | nM | CHEMBL3237863 |
| 8.57 | IC50 | 2.7 | nM | CHEMBL5394365 |
| 8.52 | IC50 | 3 | nM | BORTEZOMIB |
| 8.47 | IC50 | 3.4 | nM | CHEMBL4444107 |
| 8.47 | IC50 | 3.4 | nM | CHEMBL6143686 |
| 8.46 | IC50 | 3.43 | nM | CHEMBL5197285 |
| 8.44 | IC50 | 3.6 | nM | CHEMBL4541038 |
| 8.41 | IC50 | 3.9 | nM | CHEMBL3237862 |
| 8.41 | IC50 | 3.9 | nM | CHEMBL4547405 |
| 8.40 | IC50 | 4 | nM | CHEMBL5406440 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237864 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237867 |
| 8.39 | IC50 | 4.03 | nM | CHEMBL5171225 |
| 8.37 | IC50 | 4.28 | nM | CHEMBL4581126 |
| 8.34 | IC50 | 4.6 | nM | CHEMBL4542373 |
| 8.34 | IC50 | 4.6 | nM | CHEMBL4558648 |
| 8.32 | IC50 | 4.8 | nM | CHEMBL3237873 |
| 8.32 | IC50 | 4.8 | nM | CHEMBL4467618 |
| 8.30 | IC50 | 5 | nM | CHEMBL5398681 |
| 8.29 | IC50 | 5.1 | nM | CHEMBL3237865 |
| 8.29 | IC50 | 5.15 | nM | CHEMBL5186240 |
| 8.28 | IC50 | 5.2 | nM | CHEMBL5429323 |
| 8.28 | IC50 | 5.2 | nM | CHEMBL5431451 |
| 8.25 | IC50 | 5.6 | nM | CHEMBL5423645 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237866 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237860 |
| 8.23 | IC50 | 5.9 | nM | CHEMBL3237868 |
| 8.22 | IC50 | 6 | nM | CINNABARAMIDE F |
| 8.22 | IC50 | 6 | nM | CHEMBL5412037 |
| 8.22 | IC50 | 6 | nM | CHEMBL74336 |
| 8.20 | IC50 | 6.3 | nM | CHEMBL5440712 |
| 8.19 | IC50 | 6.4 | nM | CHEMBL4447701 |
| 8.19 | IC50 | 6.4 | nM | CHEMBL4435814 |
| 8.19 | IC50 | 6.5 | nM | CHEMBL4436430 |
| 8.19 | IC50 | 6.5 | nM | IXAZOMIB |
| 8.16 | IC50 | 6.91 | nM | BORTEZOMIB |
PubChem BioAssay actives
313 with measured affinity, of 1003 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| methyl (2R)-2-acetamido-3-[(2R,3S,4R)-2-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbonyl]sulfanylpropanoate | 277357: Inhibition of human 20S proteasome | ic50 | 0.0006 | uM |
| [(1R)-1-[[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-(pyrazine-2-carbonyl)amino]-3-methylbutyl]boronic acid | 2131634: Binding affinity to 20s proteosome (unknown origin) assessed as inhibition constant | ki | 0.0006 | uM |
| Bortezomib | 2205591: Inhibition of 20S proteasome (unknown origin) | ki | 0.0006 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0009 | uM |
| (1R,4R,5S)-1-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-5-methyl-6-oxa-2-azabicyclo[3.2.0]heptane-3,7-dione | 277357: Inhibition of human 20S proteasome | ic50 | 0.0010 | uM |
| (1R,4R,5S)-4-(2-chloroethyl)-1-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-5-methyl-6-oxa-2-azabicyclo[3.2.0]heptane-3,7-dione | 1853759: Inhibition of 20S proteasome (unknown origin) by fluorescence based assay | ic50 | 0.0013 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0015 | uM |
| N-[5-[[amino(nitramido)methylidene]amino]-1-[(4-methyl-1-oxopentan-2-yl)amino]-1-oxopentan-2-yl]-2-cyclopentyl-10-(1,3-dioxoisoindol-2-yl)decanamide | 3028: Compound was evaluated for inhibitory activity against 20S proteasome from human liver and brain | ic50 | 0.0020 | uM |
| 4-[(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-3-cyclopropylpropanoyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0022 | uM |
| 4-N-(4-benzoylphenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0024 | uM |
| 4-[(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopentylacetyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0024 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]acetyl]amino]-5-carbamimidamidopentanoyl]amino]-6-aminohexanoyl]amino]-6-aminohexanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-N-[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[2-[[2-[[2-[[(2S)-4-methyl-1-[[(2S)-4-methyl-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]pentanediamide | 1559513: Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate measured every 5 mins for 120 mins by fluorescence based assay | ic50 | 0.0025 | uM |
| 4-[(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopropylacetyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0027 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0027 | uM |
| 4-N-(4-fluorophenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0034 | uM |
| 1-N-[(2S)-4-(2,2-dimethylpropylamino)-1,4-dioxo-1-[[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]amino]butan-2-yl]-4-N-methyl-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0034 | uM |
| 4-methyl-N-[(2R)-1-[[(2R)-4-methyl-1-[(2S)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]-2-[[(2S)-2-[(2-morpholin-4-ylacetyl)amino]-4-phenylbutanoyl]amino]pentanamide | 2236585: Activation of 26s proteosome (unknown origin) | ic50 | 0.0034 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0036 | uM |
| 4-N-(1,3-benzothiazol-2-yl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0039 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0039 | uM |
| [(1R)-1-[[2-[(2,5-dibromobenzoyl)amino]acetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0040 | uM |
| 1-N-[(2S)-4-(2,2-dimethylpropylamino)-1,4-dioxo-1-[[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]amino]butan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0040 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]acetyl]amino]-5-carbamimidamidopentanoyl]amino]-6-aminohexanoyl]amino]-6-aminohexanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-N-[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[(2S)-5-carbamimidamido-1-[[2-[[2-[[2-[[(2S)-3-(4-hydroxyphenyl)-1-[[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopropan-2-yl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]pentanediamide | 1559513: Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate measured every 5 mins for 120 mins by fluorescence based assay | ic50 | 0.0043 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-(1,3,4-thiadiazol-2-yl)piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0046 | uM |
| 4-N-(4-chlorophenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0046 | uM |
| 4-N-(4-methoxyphenyl)-1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0048 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-(4-phenylmethoxybutyl)butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0048 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-3-cyclopropylpropanoyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0050 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0051 | uM |
| (2S)-N’-(2,2-dimethylpropyl)-2-[[4-[methyl(pyridine-3-carbonyl)amino]piperidine-1-carbonyl]amino]-N-[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]butanediamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0052 | uM |
| 4-[(1R)-1-[[2-[(2,5-dichlorobenzoyl)amino]acetyl]amino]-3-methylbutyl]-2-methyl-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0052 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]acetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0052 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopropylacetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0056 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| benzyl N-[(2S)-1-[[(2R)-1-[(1R,2S)-2-[[(2R,3S)-3-[(2S)-butan-2-yl]-4-oxooxetane-2-carbonyl]amino]cyclopropyl]-4-phenylbutan-2-yl]amino]-1-oxopropan-2-yl]carbamate | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| (2S)-2-[(2,5-dichlorobenzoyl)amino]-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0059 | uM |
| (2R)-2-acetamido-3-[(2R,3S,4R)-2-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbonyl]sulfanylpropanoic acid | 277357: Inhibition of human 20S proteasome | ic50 | 0.0060 | uM |
| [(1R)-1-[[2-[[2,5-bis(trifluoromethyl)benzoyl]amino]-2-cyclopentylacetyl]amino]-3-methylbutyl]boronic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0060 | uM |
| N-[5-[[amino(nitramido)methylidene]amino]-1-[(4-methyl-1-oxopentan-2-yl)amino]-1-oxopentan-2-yl]-10-cyano-2-cyclopentyldecanamide | 3028: Compound was evaluated for inhibitory activity against 20S proteasome from human liver and brain | ic50 | 0.0060 | uM |
| 4-[(1R)-1-[[2-[(2,5-dichlorobenzoyl)amino]acetyl]amino]-3-methylbutyl]-3,5,10-trioxa-4-boratricyclo[5.2.1.02,6]decane-8-carboxylic acid | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0063 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-(1,2-oxazol-3-yl)piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0064 | uM |
| (2S)-2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]-4-methyl-N-[(2S)-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]pentanamide | 1559513: Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate measured every 5 mins for 120 mins by fluorescence based assay | ic50 | 0.0064 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-pyrazin-2-ylpiperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0065 | uM |
| Ixazomib | 2033891: Inhibition of human 20S proteasome chymotrypsin-like activity using Suc-Leu-Leu-Val-Tyr-AMC as fluorogenic peptide pre-incubated for 10 mins with compound followed by substrate addition for 60 mins by spectrofluorimetric analysis | ic50 | 0.0065 | uM |
| 4-N-(4-chlorophenyl)-1-N-[(2S)-4-(2,2-dimethylpropylamino)-1,4-dioxo-1-[[(2S)-1-oxo-4-phenyl-1-[[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]amino]butan-2-yl]amino]butan-2-yl]-4-N-methylpiperidine-1,4-dicarboxamide | 1903224: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition measured by fluorescence assay | ic50 | 0.0069 | uM |
| (2S)-N-[(2S,3R,4R)-3-hydroxy-5-[[(2S)-1-[(2-hydroxy-4-methoxyphenyl)methylamino]-3-methyl-1-oxobutan-2-yl]amino]-5-oxo-1-phenyl-4-[(3,4,5-trimethoxyphenyl)methylamino]pentan-2-yl]-3,3-dimethyl-2-[(2-naphthalen-1-ylacetyl)amino]butanamide | 3027: Tested in vitro for inhibition of chymotrypsin like activity of purified human 20S proteasome | ic50 | 0.0070 | uM |
| Carfilzomib | 1770085: Inhibition of human 20S proteasome chymotrypsin-like activity in human RPMI-8226 cells using Suc-LLVY-AMC as fluorogenic substrate incubated for 3 hrs by fluorescence assay | ic50 | 0.0070 | uM |
| (2S)-2-[[(2S)-3-(4-hydroxyphenyl)-2-[(2-naphthalen-1-ylacetyl)amino]propanoyl]amino]-N-[1-(4-hydroxyphenyl)-3-oxopropan-2-yl]-3-methylbutanamide | 248827: Inhibitory concentration to inhibit chymotrypsin-like activity of 20S proteasome prepared from human leukemia HL-60 cells was determined | ic50 | 0.0070 | uM |
CTD chemical–gene interactions
52 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| arsenite | affects binding, increases reaction, increases methylation | 2 |
| sodium arsenite | affects cotreatment, increases abundance, increases expression | 2 |
| Arsenic Trioxide | increases expression | 2 |
| Arsenic | affects cotreatment, increases expression, decreases expression, increases abundance | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression, increases expression | 2 |
| Particulate Matter | decreases expression, increases abundance, affects expression, increases reaction | 2 |
| aristolochic acid I | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | increases expression | 1 |
| nobiletin | decreases expression, decreases reaction | 1 |
| sodium arsenate | decreases expression, decreases reaction | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, decreases expression | 1 |
| trichostatin A | affects cotreatment, decreases expression | 1 |
| beta-lapachone | increases expression | 1 |
| mono-(2-ethylhexyl)phthalate | increases expression | 1 |
| cobaltous chloride | increases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| arsenic trichloride | decreases expression, increases abundance | 1 |
| microcystin RR | decreases expression | 1 |
| benzyloxycarbonylleucyl-leucyl-leucine aldehyde | increases expression | 1 |
| chloropicrin | decreases expression | 1 |
| poly(propyleneimine) | decreases expression | 1 |
| oxidized-L-alpha-1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphorylcholine | affects expression, increases reaction | 1 |
| erucylphospho-N,N,N-trimethylpropylammonium | decreases expression | 1 |
| stattic | decreases expression | 1 |
| EGFR tyrosine kinase inhibitor 324674 | decreases reaction, increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Decitabine | decreases expression, affects cotreatment | 1 |
| Sunitinib | decreases expression | 1 |
ChEMBL screening assays
171 unique, capped per target: 162 binding, 6 admet, 3 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3222879 | Binding | Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition measured after 90 mins by fluorescence assay | Oxathiazole-2-one derivative of bortezomib: Synthesis, stability and proteasome inhibition activity — *Medchemcomm* |
| CHEMBL4736581 | ADMET | Inhibition of human 20S proteasome stably expressed in HEK293 cells at 5 to 50 uM using succinyl-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition and measured at 3 mins interval for 30 mins by fluorescence assay | A covalent p97/VCP ATPase inhibitor can overcome resistance to CB-5083 and NMS-873 in colorectal cancer cells. — *Eur J Med Chem* |
| CHEMBL834792 | Functional | Inhibitory concentration to inhibit trypsin-like activity of 20S proteasome from human leukemia HL-60 cells was determined | Structure-based design of derivatives of tyropeptin A as the potent and selective inhibitors of mammalian 20S proteasome. — *Bioorg Med Chem Lett* |
Cellosaurus cell lines
1 cell lines: 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_F6JQ | EDITGENE PSMB4(NC_000001.11:g.151399383G>C) Point Mutation in A-549 Cell Line | Cancer cell line | Male |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 223 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT05044819 | Phase 4 | ACTIVE_NOT_RECRUITING | Assessment of Potential for Chronic Liver Injury in Participants Treated With Epidiolex (Cannabidiol) Oral Solution |
| NCT06598449 | Phase 4 | RECRUITING | Assessment of Safety of the Use of Fenfluramine in Children With Dravet Syndrome Under 24 Months of Age |
| NCT06924827 | Phase 4 | NOT_YET_RECRUITING | A Study to Investigate the Transition of Children From ‘Artisanal Cannabidiol (CBD) to Epidiolex |
| NCT07112365 | Phase 4 | RECRUITING | The FINTEPLA as an Anti-SUDEP Therapy in Dravet Syndrome Project |
| NCT01882400 | Phase 4 | COMPLETED | Assessment of Response to Treatment of Osteoporosis With Oral Bisphosphonates in Patients With Muscular Dystrophy |
| NCT00098475 | Phase 3 | ACTIVE_NOT_RECRUITING | Lenalidomide and Dexamethasone With or Without Thalidomide in Treating Patients With Multiple Myeloma |
| NCT00114101 | Phase 3 | ACTIVE_NOT_RECRUITING | Lenalidomide in Treating Patients With Multiple Myeloma Undergoing Autologous Stem Cell Transplant |
| NCT00644228 | Phase 3 | ACTIVE_NOT_RECRUITING | Lenalidomide and Dexamethasone With or Without Bortezomib in Treating Patients With Previously Untreated Multiple Myeloma |
| NCT00869206 | Phase 3 | COMPLETED | Zoledronic Acid in Treating Patients With Metastatic Breast Cancer, Metastatic Prostate Cancer, or Multiple Myeloma With Bone Involvement |
| NCT02091375 | Phase 3 | COMPLETED | Antiepileptic Efficacy Study of GWP42003-P in Children and Young Adults With Dravet Syndrome (GWPCARE1) |
| NCT02174094 | Phase 3 | WITHDRAWN | Clobazam as Adjunctive Therapy in Paediatric Patients Aged ≥1 to ≤16 Years With Dravet Syndrome |
| NCT02187809 | Phase 3 | TERMINATED | Safety and Tolerability of Clobazam as Adjunctive Therapy in Paediatric Patients Aged ≥1 to ≤16 Years With Dravet Syndrome |
| NCT02224573 | Phase 3 | COMPLETED | An Open Label Extension Study of Cannabidiol (GWP42003-P) in Children and Adults With Dravet or Lennox-Gastaut Syndromes |
| NCT02224703 | Phase 3 | COMPLETED | GWPCARE2 A Study to Investigate the Efficacy and Safety of Cannabidiol (GWP42003-P) in Children and Young Adults With Dravet Syndrome |
| NCT02318563 | Phase 3 | WITHDRAWN | Cannabidiol Oral Solution as an Adjunctive Therapy for Treatment of Participants With Inadequately Controlled Dravet Syndrome |
| NCT02682927 | Phase 3 | COMPLETED | A Trial of Two Fixed Doses of ZX008 (Fenfluramine HCl) in Children and Young Adults With Dravet Syndrome |
| NCT02823145 | Phase 3 | COMPLETED | An Open-Label Extension Trial to Assess the Long-Term Safety of ZX008 (Fenfluramine Hydrochloride HCl) Oral Solution in Children and Young Adults With Dravet Syndrome |
| NCT02926898 | Phase 3 | COMPLETED | A 2-Part Study to Investigate the Dose-Ranging Safety and Pharmacokinetics, Followed by the Efficacy and Safety of ZX008 (Fenfluramine Hydrochloride) Oral Solution as an Adjunctive Therapy in Children ≥ 2 Years Old and Young Adults With Dravet Syndrome |
| NCT03299842 | Phase 3 | TERMINATED | A Study to Assess the Usability of the Embrace Seizure Detection Watch in Children and Young Adults With Dravet Syndrome |
| NCT03936777 | Phase 3 | COMPLETED | A Study to Investigate the Long-Term Safety of ZX008 (Fenfluramine Hydrochloride) Oral Solution in Children and Adults With Epileptic Encephalopathy Including Dravet Syndrome and Lennox-Gastaut Syndrome |
| NCT04462770 | Phase 3 | RECRUITING | A Study of EPX-100 (Clemizole Hydrochloride) in Participants With Dravet Syndrome |
| NCT04611438 | Phase 3 | UNKNOWN | Research on Cognitive Effect of Cannabidiol on Dravet Syndrome and Lennox-Gastaut SyndromeGastaut Syndrome |
| NCT04940624 | Phase 3 | COMPLETED | A Study of Soticlestat as an Add-on Therapy in Children and Young Adults With Dravet Syndrome |
| NCT05163314 | Phase 3 | TERMINATED | A Study of Soticlestat as an Add-on Therapy in Children and Adults With Dravet Syndrome or Lennox-Gastaut Syndrome |
| NCT05560282 | Phase 3 | TERMINATED | Fenfluramine for Adult Dravet Patients |
| NCT06118255 | Phase 3 | COMPLETED | A Study to Evaluate Safety, Tolerability, and Pharmacokinetics of Fenfluramine (Hydrochloride) in Infants 1 Year to Less Than 2 Years of Age With Dravet Syndrome |
| NCT06422377 | Phase 3 | TERMINATED | A Study Evaluating Soticlestat in Participants With Dravet Syndrome or Lennox-Gastaut Syndrome Who Have Been Exposed to Fenfluramine |
| NCT06660394 | Phase 3 | ACTIVE_NOT_RECRUITING | A Phase 3, Placebo-Controlled Study to Investigate LP352 in Children and Adults With Dravet Syndrome (DS) |
| NCT06872125 | Phase 3 | RECRUITING | A Double-blind Study Evaluating the Efficacy, Safety, and Tolerability of Zorevunersen in Patients With Dravet Syndrome |
| NCT01254019 | Phase 3 | COMPLETED | A Clinical Study to Assess the Efficacy and Safety of GSK2402968 in Subjects With Duchenne Muscular Dystrophy |
| NCT01480245 | Phase 3 | TERMINATED | Open Label Study of GSK2402968 in Subjects With Duchenne Muscular Dystrophy |
| NCT01803412 | Phase 3 | TERMINATED | A Study of the Safety, Tolerability & Efficacy of Long-term Administration of Drisapersen in US & Canadian Subjects |
| NCT01826487 | Phase 3 | COMPLETED | Phase 3 Study of Ataluren in Participants With Nonsense Mutation Duchenne Muscular Dystrophy (nmDMD) |
| NCT01890798 | Phase 3 | WITHDRAWN | Drisapersen Duchenne Muscular Dystrophy (DMD) Treatment Protocol |
| NCT02090959 | Phase 3 | TERMINATED | An Extension Study of Ataluren (PTC124) in Participants With Nonsense Mutation Dystrophinopathy |
| NCT02432885 | Phase 3 | COMPLETED | Myocardial Fibrosis Progression in Duchenne and Becker Muscular Dystrophy - ACE Inhibitor Therapy Trial |
| NCT03179631 | Phase 3 | COMPLETED | Long-Term Outcomes of Ataluren in Duchenne Muscular Dystrophy |
| NCT05126758 | Phase 3 | ACTIVE_NOT_RECRUITING | A Study of Deramiocel (CAP-1002) in Ambulatory and Non-Ambulatory Patients With Duchenne Muscular Dystrophy |
| NCT07587242 | Phase 3 | RECRUITING | A Phase 3 Study to Evaluate the Safety and Efficacy of AOC 1044 (Also Referred to as Delpacibart Zotadirsen) in Participants With DMD With Gene Mutations Amenable to Exon 44 Skipping |
| NCT07608432 | Phase 3 | RECRUITING | Efficacy, Safety, and Tolerability of Zeleciment Rostudirsen (DYNE-251) Administered Intravenously Every 4 Weeks in Ambulatory Participants With Duchenne Muscular Dystrophy (FORZETTO) |
| NCT00066638 | Phase 2 | COMPLETED | FR901228 in Treating Patients With Relapsed or Refractory Multiple Myeloma |
| NCT00088855 | Phase 2 | COMPLETED | Bortezomib and Pegylated Liposomal Doxorubicin Hydrochloride in Treating Patients With Previously Untreated Symptomatic Multiple Myeloma |
| NCT00445692 | Phase 2 | COMPLETED | Lenalidomide, Dexamethasone, and Clarithromycin in Treating Patients Who Have Undergone Stem Cell Transplant for Multiple Myeloma |
| NCT00839956 | Phase 2 | COMPLETED | Bortezomib and Vorinostat in Treating Patients With Multiple Myeloma Who Have Undergone Autologous Stem Cell Transplant |
| NCT01028716 | Phase 2 | TERMINATED | Donor Peripheral Blood Stem Cell Transplant in Treating Patients With Hematologic Malignancies |
| NCT01251172 | Phase 2 | WITHDRAWN | RO4929097 After Autologous Stem Cell Transplant in Treating Patients With Multiple Myeloma |
| NCT01605032 | Phase 2 | COMPLETED | Busulfan, Melphalan, and Bortezomib Before First-Line Stem Cell Transplant in Treating Patients With Multiple Myeloma |
| NCT01607073 | Phase 2 | COMPLETED | Verapamil as Therapy for Children and Young Adults With Dravet Syndrome |
| NCT02091206 | Phase 2 | COMPLETED | A Dose-ranging Pharmacokinetics and Safety Study of GWP42003-P in Children With Dravet Syndrome (GWPCARE1) |
| NCT03635073 | Phase 2 | TERMINATED | A Study of Soticlestat in Adults and Children With Rare Epilepsies |
| NCT03650452 | Phase 2 | COMPLETED | A Phase 2, Multicenter, Randomized, Double-blind, Placebo-controlled Study to Evaluate the Efficacy, Safety, and Tolerability of TAK-935 (OV935) as an Adjunctive Therapy in Pediatric Participants With Developmental and/or Epileptic Encephalopathies |
| NCT04740476 | Phase 2 | ACTIVE_NOT_RECRUITING | An Open-Label Extension Study of STK-001 for Patients With Dravet Syndrome |
| NCT05626634 | Phase 2 | COMPLETED | Open-label, Long-term Safety Study of LP352 in Subjects With Developmental and Epileptic Encephalopathy |
| NCT06401538 | Phase 2 | RECRUITING | BMB-101 in Absence Epilepsy and DEE |
| NCT01153932 | Phase 2 | COMPLETED | Phase II Doubleblind Exploratory Study of GSK2402968 in Ambulant Subjects With Duchenne Muscular Dystrophy |
| NCT01462292 | Phase 2 | COMPLETED | A Clinical Study to Assess Two Doses of GSK2402968 in Subjects With Duchenne Muscular Dystrophy (DMD) |
| NCT01910649 | Phase 2 | TERMINATED | A Phase I/II, Open Label, Escalating Dose, Pilot Study to Assess Effect, Safety, Tolerability and PK of Multiple SC Doses of Drisapersen in Patients With Duchenne Muscular Dystrophy and to Assess the Potential for IV Dosing as an Alternative Route of Administration |
| NCT03406780 | Phase 2 | COMPLETED | A Study of CAP-1002 in Ambulatory and Non-Ambulatory Patients With Duchenne Muscular Dystrophy |
| NCT05479981 | Phase 2 | COMPLETED | Extension of AOC 1001-CS1 (MARINA) Study in Adult Myotonic Dystrophy Type 1 (DM1) Patients |
| NCT06290713 | Phase 2 | RECRUITING | Vasodilator and Exercise Study for DMD (VASO-REx) |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for PSMB4 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Associated diseases: proteasome-associated autoinflammatory syndrome 3
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): muscular dystrophy, proteasome-associated autoinflammatory syndrome 1, proteasome-associated autoinflammatory syndrome 3