PSMB5
gene geneOn this page
Also known as MB1
Summary
PSMB5 (proteasome 20S subunit beta 5, HGNC:9542) is a protein-coding gene on chromosome 14q11.2, encoding Proteasome subunit beta type-5 (P28074). Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. It is a common-essential gene (DepMap: required in 95.0% of cancer cell lines).
The proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure. The core structure is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a member of the proteasome B-type family, also known as the T1B family, that is a 20S core beta subunit in the proteasome. This catalytic subunit is not present in the immunoproteasome and is replaced by catalytic subunit 3i (proteasome beta 8 subunit). Multiple transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 5693 — RefSeq curated summary.
At a glance
- GWAS associations: 19
- Clinical variants (ClinVar): 35 total
- Druggable target: yes — 15 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 95.0% of screened cell lines (common-essential)
- MANE Select transcript:
NM_002797
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:9542 |
| Approved symbol | PSMB5 |
| Name | proteasome 20S subunit beta 5 |
| Location | 14q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MB1 |
| Ensembl gene | ENSG00000100804 |
| Ensembl biotype | protein_coding |
| OMIM | 600306 |
| Entrez | 5693 |
Gene structure
Transcript identifiers
Ensembl transcripts: 12 — 11 protein_coding, 1 nonsense_mediated_decay
ENST00000334454, ENST00000361611, ENST00000425762, ENST00000460922, ENST00000493471, ENST00000555895, ENST00000896864, ENST00000896865, ENST00000896866, ENST00000926152, ENST00000926153, ENST00000926154
RefSeq mRNA: 3 — MANE Select: NM_002797
NM_001130725, NM_001144932, NM_002797
CCDS: CCDS45083, CCDS45084, CCDS9584
Canonical transcript exons
ENST00000361611 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000889197 | 23025856 | 23026375 |
| ENSE00001149729 | 23034684 | 23034900 |
| ENSE00003535354 | 23033368 | 23033674 |
Expression profiles
Bgee: expression breadth ubiquitous, 294 present calls, max score 98.84.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 169.8429 / max 793.4199, expressed in 1824 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 142293 | 167.3078 | 1824 |
| 142294 | 1.8065 | 1116 |
| 142295 | 0.7286 | 496 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| gastrocnemius | UBERON:0001388 | 98.84 | gold quality |
| islet of Langerhans | UBERON:0000006 | 98.67 | gold quality |
| muscle of leg | UBERON:0001383 | 98.64 | gold quality |
| stromal cell of endometrium | CL:0002255 | 98.51 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 98.35 | gold quality |
| cortical plate | UBERON:0005343 | 98.30 | gold quality |
| muscle organ | UBERON:0001630 | 98.27 | gold quality |
| right adrenal gland | UBERON:0001233 | 98.26 | gold quality |
| ganglionic eminence | UBERON:0004023 | 98.18 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 98.13 | gold quality |
| left adrenal gland | UBERON:0001234 | 98.01 | gold quality |
| deltoid | UBERON:0001476 | 97.92 | gold quality |
| embryo | UBERON:0000922 | 97.88 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 97.86 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 97.83 | gold quality |
| adrenal tissue | UBERON:0018303 | 97.79 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 97.78 | gold quality |
| prefrontal cortex | UBERON:0000451 | 97.77 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 97.73 | gold quality |
| apex of heart | UBERON:0002098 | 97.72 | gold quality |
| ventricular zone | UBERON:0003053 | 97.69 | gold quality |
| tibialis anterior | UBERON:0001385 | 97.64 | gold quality |
| right atrium auricular region | UBERON:0006631 | 97.64 | gold quality |
| heart left ventricle | UBERON:0002084 | 97.58 | gold quality |
| adrenal cortex | UBERON:0001235 | 97.53 | gold quality |
| cardiac ventricle | UBERON:0002082 | 97.48 | gold quality |
| adrenal gland | UBERON:0002369 | 97.47 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 97.46 | gold quality |
| lower esophagus | UBERON:0013473 | 97.46 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 97.45 | gold quality |
Single-cell (SCXA)
Detected in 5 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-112 | yes | 9.80 |
| E-MTAB-10042 | yes | 8.41 |
| E-CURD-53 | no | 254.26 |
| E-GEOD-125970 | no | 3.24 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ETS1, GABPA, NFE2L2, SP1, STAT3
miRNA regulators (miRDB)
20 targeting PSMB5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-4534 | 99.99 | 66.58 | 1907 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-7-1-3P | 99.91 | 71.53 | 4384 |
| HSA-MIR-7-2-3P | 99.91 | 71.40 | 4394 |
| HSA-MIR-142-3P | 99.62 | 71.30 | 974 |
| HSA-MIR-6073 | 99.60 | 70.36 | 793 |
| HSA-MIR-2392 | 99.43 | 67.50 | 708 |
| HSA-MIR-1843 | 98.97 | 66.07 | 838 |
| HSA-MIR-4802-5P | 98.97 | 66.26 | 833 |
| HSA-MIR-455-5P | 98.74 | 67.31 | 795 |
| HSA-MIR-4669 | 97.94 | 62.71 | 224 |
| HSA-MIR-4660 | 97.79 | 67.44 | 1328 |
| HSA-MIR-1278 | 97.75 | 67.55 | 628 |
| HSA-MIR-27B-5P | 97.34 | 66.55 | 549 |
| HSA-MIR-6802-3P | 97.29 | 65.42 | 613 |
| HSA-MIR-6869-5P | 97.17 | 67.06 | 634 |
| HSA-MIR-921 | 97.09 | 66.45 | 562 |
| HSA-MIR-3174 | 94.63 | 63.64 | 577 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 95.0% of screened cell lines, common-essential.
Literature-anchored findings (GeneRIF, showing 26)
- interaction of TAP1 and TAP2 and P-glycoprotein with proteasome subunits beta-5 and beta-5i suggest direct targeting of antigenic peptides to the ER via a TAP-proteasome association and a possible role for P-glycoprotein (PMID:15488952)
- Proteasome activity can be genetically “upregulated” in lens cells by overexpression of beta5 catalytic subunit. Resulting increase in proteasome activity leads to decrease in oxidized proteins and enhanced cell survival following oxidative stress. (PMID:17262013)
- G322A mutation of the PSMB5 gene is a novel mechanism for bortezomib resistance. (PMID:18502982)
- nonsynonymous coding single nucleotide polymorphismsin the proteasome beta 5 subunit gene did not show significant effects on proteasome activity, but SNPs did influence transcription (PMID:18519783)
- Overexpression of PSMB5 is an important mechanism for bortezomib resistance in Jurkat cell lines. (PMID:18562081)
- a novel mechanism of bortezomib resistance associated with the selective overexpression of a mutant PSMB5 protein (PMID:18565852)
- Nuclear MB1 expression was an independent predictor of worse survival in ovarian cancer. (PMID:19243813)
- Mutations of the PSMB5 gene resulting in substitutions of Ala49 and Ala50 of PSMB5 protein can confer varying bortezomib resistance (PMID:19426847)
- Expression of mutated PSMB5 was associated with the prevention of the accumulation of unfolded proteins (PMID:20555361)
- CDK5 regulation of proteasome subunit PSMB5 was identified as a probable route to antineoplastic drug sensitization. (PMID:21289309)
- No mutations or differences in PSMB5 mRNA expression were seen before bortezomib treatment in 3 multiple myeloma patients, but after treatment, 1 patient showed PSMB5 upregulation associated with bortezomib resistance. (PMID:21920470)
- PSMB5 overexpression is associated with Bortezomib resistance in myeloma. (PMID:21978467)
- Letter/Case Reports: proteasome subunit beta5t is expressed in cervical ectopic thymoma. (PMID:22523338)
- The expression of proteasome beta5 decreases markedly in human atherosclerotic plaques. (PMID:22781773)
- Data indicate that treatment-emergent resistance to single-agent bortezomib was independent of variants in the proteasome genes PSMB1, PSMB5, PSMB6, PSMB8, PSMB9, and PSMB10. (PMID:23018640)
- critical role of PSMB5 in 20S proteasome-mediated protection against replicative senescence, pointing to a possible strategy for maintaining the integrity of culture-expanded bone marrow stromal cells by manipulating the expression of PSMB5 (PMID:24393841)
- Data indicate that proteasomal subunit X PSMB5 is a target of signal transducer and activator of transcription 3 (STAT3). (PMID:24627483)
- Results identified PSMB5 Q62P mutation to underlie bortezomib resistance in Down-syndrome-associated acute myeloid leukemia cells. (PMID:28143565)
- We also discovered and replicated three genome-wide significant variants in previously unreported loci for RDW (SLC12A2 rs17764730, PSMB5 rs941718), and hematocrit (PROX1 rs3754140) and an upstream anti-sense long-noncoding RNA, LINC01184, as the likely causal variant (PMID:28453575)
- Our results suggest a potential role for PSMB5 as a biomarker and therapeutic target for Triple-negative breast cancer (PMID:28623645)
- PSMB5 knockdown could increase the expression of pro-apoptosis gene Bax and cleaved caspase-3 (PMID:29365400)
- PSMB5 mutations are associated with multiple myeloma. (PMID:30026573)
- Transcriptional downregulation of miR-127-3p by CTCF promotes prostate cancer bone metastasis by targeting PSMB5. (PMID:31562641)
- Identification of PSMB5 as a genetic modifier of fragile X-associated tremor/ataxia syndrome. (PMID:35617426)
- PSMB5 overexpression is correlated with tumor proliferation and poor prognosis in hepatocellular carcinoma. (PMID:36062301)
- MiR-383 sensitizes osteosarcoma cells to bortezomib treatment via down-regulating PSMB5. (PMID:38252234)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | psmb5 | ENSDARG00000075445 |
| mus_musculus | Psmb5 | ENSMUSG00000022193 |
| rattus_norvegicus | Psmb5 | ENSRNOG00000013386 |
| drosophila_melanogaster | Prosbeta1 | FBGN0010590 |
| caenorhabditis_elegans | WBGENE00003947 |
Paralogs (18): PSMB1 (ENSG00000008018), PSMA4 (ENSG00000041357), PSMA3 (ENSG00000100567), PSMA6 (ENSG00000100902), PSMA7 (ENSG00000101182), PSMA2 (ENSG00000106588), PSMB2 (ENSG00000126067), PSMA1 (ENSG00000129084), PSMB7 (ENSG00000136930), PSMB6 (ENSG00000142507), PSMA5 (ENSG00000143106), PSMA8 (ENSG00000154611), PSMB4 (ENSG00000159377), PSMB8 (ENSG00000204264), PSMB10 (ENSG00000205220), PSMB11 (ENSG00000222028), PSMB9 (ENSG00000240065), PSMB3 (ENSG00000277791)
Protein
Protein identifiers
Proteasome subunit beta type-5 — P28074 (reviewed: P28074)
Alternative names: Macropain epsilon chain, Multicatalytic endopeptidase complex epsilon chain, Proteasome chain 6, Proteasome epsilon chain, Proteasome subunit MB1, Proteasome subunit X, Proteasome subunit beta-5
All UniProt accessions (5): P28074, A0A140VJS7, G3V3K3, G8JLC2, H0YJM8
UniProt curated annotations — full annotation on UniProt →
Function. Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). Within the 20S core complex, PSMB5 displays a chymotrypsin-like activity.
Subunit / interactions. The 26S proteasome consists of a 20S proteasome core and two 19S regulatory subunits. The 20S proteasome core is a barrel-shaped complex made of 28 subunits that are arranged in four stacked rings. The two outer rings are each formed by seven alpha subunits, and the two inner rings are formed by seven beta subunits. The proteolytic activity is exerted by three beta-subunits PSMB5, PSMB6 and PSMB7. Directly interacts with POMP. Interacts with ABCB1 and TAP1. (Microbial infection) Interacts with HIV-1 TAT protein.
Subcellular location. Cytoplasm. Nucleus.
Induction. Down-regulated by IFNG/IFN-gamma (at protein level). Induced in breast cancer tissue. Up-regulated by sulforaphane in breast cancer cells.
Similarity. Belongs to the peptidase T1B family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P28074-1 | 1 | yes |
| P28074-2 | 2 | |
| P28074-3 | 3 |
RefSeq proteins (3): NP_001124197, NP_001138404, NP_002788* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000243 | Pept_T1A_subB | Family |
| IPR001353 | Proteasome_sua/b | Family |
| IPR016050 | Proteasome_bsu_CS | Conserved_site |
| IPR023333 | Proteasome_suB-type | Family |
| IPR029055 | Ntn_hydrolases_N | Homologous_superfamily |
Pfam: PF00227
UniProt features (41 total): strand 17, helix 6, sequence conflict 5, turn 3, mutagenesis site 3, splice variant 2, propeptide 1, chain 1, active site 1, binding site 1, sequence variant 1
Structure
Experimental structures (PDB)
152 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5LE5 | X-RAY DIFFRACTION | 1.8 |
| 5LEY | X-RAY DIFFRACTION | 1.9 |
| 5LF4 | X-RAY DIFFRACTION | 1.99 |
| 5LF1 | X-RAY DIFFRACTION | 2 |
| 5LF7 | X-RAY DIFFRACTION | 2 |
| 8UD9 | ELECTRON MICROSCOPY | 2.04 |
| 5LF6 | X-RAY DIFFRACTION | 2.07 |
| 5LF3 | X-RAY DIFFRACTION | 2.1 |
| 8BZL | X-RAY DIFFRACTION | 2.14 |
| 5LEZ | X-RAY DIFFRACTION | 2.19 |
| 5LEX | X-RAY DIFFRACTION | 2.2 |
| 5LF0 | X-RAY DIFFRACTION | 2.41 |
| 9K53 | ELECTRON MICROSCOPY | 2.5 |
| 9HMN | ELECTRON MICROSCOPY | 2.55 |
| 4R3O | X-RAY DIFFRACTION | 2.6 |
| 6RGQ | ELECTRON MICROSCOPY | 2.6 |
| 9YUZ | ELECTRON MICROSCOPY | 2.6 |
| 5L5Y | X-RAY DIFFRACTION | 2.7 |
| 5L5Z | X-RAY DIFFRACTION | 2.7 |
| 5L60 | X-RAY DIFFRACTION | 2.7 |
| 5L63 | X-RAY DIFFRACTION | 2.7 |
| 5L64 | X-RAY DIFFRACTION | 2.7 |
| 8CVR | ELECTRON MICROSCOPY | 2.7 |
| 6KWY | ELECTRON MICROSCOPY | 2.72 |
| 9MBP | ELECTRON MICROSCOPY | 2.75 |
| 5L5W | X-RAY DIFFRACTION | 2.8 |
| 5L61 | X-RAY DIFFRACTION | 2.8 |
| 5L62 | X-RAY DIFFRACTION | 2.8 |
| 7NAN | ELECTRON MICROSCOPY | 2.8 |
| 8TM6 | ELECTRON MICROSCOPY | 2.8 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P28074-F1 | 83.34 | 0.76 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 60 (nucleophile)
Ligand- & substrate-binding residues (1): 108
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 108 | displays resistance to the bortezomib, a proteasome inhibitor of the chymotrypsin-like activity. displays high resistanc |
| 108 | displays high resistance to the bortezomib, a proteasome inhibitor of the chymotrypsin-like activity. |
| 109 | displays high resistance to the bortezomib, a proteasome inhibitor of the chymotrypsin-like activity; when associated wi |
Function
Pathways and Gene Ontology
Reactome pathways
68 pathways
| ID | Pathway |
|---|---|
| R-HSA-1169091 | Activation of NF-kappaB in B cells |
| R-HSA-1234176 | Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha |
| R-HSA-1236974 | ER-Phagosome pathway |
| R-HSA-1236978 | Cross-presentation of soluble exogenous antigens (endosomes) |
| R-HSA-174084 | Autodegradation of Cdh1 by Cdh1:APC/C |
| R-HSA-174113 | SCF-beta-TrCP mediated degradation of Emi1 |
| R-HSA-174154 | APC/C:Cdc20 mediated degradation of Securin |
| R-HSA-174178 | APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 |
| R-HSA-174184 | Cdc20:Phospho-APC/C mediated degradation of Cyclin A |
| R-HSA-180534 | Vpu mediated degradation of CD4 |
| R-HSA-180585 | Vif-mediated degradation of APOBEC3G |
| R-HSA-187577 | SCF(Skp2)-mediated degradation of p27/p21 |
| R-HSA-195253 | Degradation of beta-catenin by the destruction complex |
| R-HSA-202424 | Downstream TCR signaling |
| R-HSA-211733 | Regulation of activated PAK-2p34 by proteasome mediated degradation |
| R-HSA-2467813 | Separation of Sister Chromatids |
| R-HSA-2871837 | FCERI mediated NF-kB activation |
| R-HSA-349425 | Autodegradation of the E3 ubiquitin ligase COP1 |
| R-HSA-350562 | Regulation of ornithine decarboxylase (ODC) |
| R-HSA-382556 | ABC-family protein mediated transport |
| R-HSA-450408 | AUF1 (hnRNP D0) binds and destabilizes mRNA |
| R-HSA-4608870 | Asymmetric localization of PCP proteins |
| R-HSA-4641257 | Degradation of AXIN |
| R-HSA-4641258 | Degradation of DVL |
| R-HSA-5358346 | Hedgehog ligand biogenesis |
| R-HSA-5362768 | Hh mutants are degraded by ERAD |
| R-HSA-5607761 | Dectin-1 mediated noncanonical NF-kB signaling |
| R-HSA-5607764 | CLEC7A (Dectin-1) signaling |
| R-HSA-5610780 | Degradation of GLI1 by the proteasome |
| R-HSA-5610783 | Degradation of GLI2 by the proteasome |
MSigDB gene sets: 412 (showing top):
GSE18804_SPLEEN_MACROPHAGE_VS_BRAIN_TUMORAL_MACROPHAGE_UP, REACTOME_DNA_REPLICATION, TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_MONOCYTE_UP, REACTOME_SIGNALING_BY_NOTCH, REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1, REACTOME_INNATE_IMMUNE_SYSTEM, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, KAAB_FAILED_HEART_ATRIUM_DN, BASSO_B_LYMPHOCYTE_NETWORK, GOBP_RESPONSE_TO_PEPTIDE, REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION, KEGG_PROTEASOME, PAL_PRMT5_TARGETS_UP, REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION
GO Biological Process (6): proteolysis (GO:0006508), response to oxidative stress (GO:0006979), proteasomal ubiquitin-independent protein catabolic process (GO:0010499), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), proteasome assembly (GO:0043248), obsolete proteolysis involved in protein catabolic process (GO:0051603)
GO Molecular Function (5): endopeptidase activity (GO:0004175), threonine-type endopeptidase activity (GO:0004298), peptidase activity (GO:0008233), protein binding (GO:0005515), hydrolase activity (GO:0016787)
GO Cellular Component (11): proteasome complex (GO:0000502), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), centrosome (GO:0005813), cytosol (GO:0005829), proteasome core complex (GO:0005839), proteasome core complex, beta-subunit complex (GO:0019774), extracellular exosome (GO:0070062), sperm midpiece (GO:0097225), sperm principal piece (GO:0097228)
Reactome top-level categories
Rollup of top-18 pathways:
| Category | Pathways |
|---|---|
| Antigen processing-Cross presentation | 2 |
| APC/C-mediated degradation of cell cycle proteins | 2 |
| Host Interactions of HIV factors | 2 |
| Downstream signaling events of B Cell Receptor (BCR) | 1 |
| Cellular response to hypoxia | 1 |
| Regulation of APC/C activators between G1/S and early anaphase | 1 |
| APC/C:Cdc20 mediated degradation of mitotic proteins | 1 |
| APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint | 1 |
| Cyclin E associated events during G1/S transition | 1 |
| Cyclin A:Cdk2-associated events at S phase entry | 1 |
| Signaling by WNT | 1 |
| TCR signaling | 1 |
| Regulation of Apoptosis | 1 |
| Mitotic Anaphase | 1 |
| Fc epsilon receptor (FCERI) signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| proteasomal protein catabolic process | 2 |
| intracellular protein-containing complex | 2 |
| intracellular anatomical structure | 2 |
| sperm flagellum | 2 |
| protein metabolic process | 1 |
| response to stress | 1 |
| ubiquitin-dependent protein catabolic process | 1 |
| protein-containing complex assembly | 1 |
| peptidase activity | 1 |
| endopeptidase activity | 1 |
| threonine-type peptidase activity | 1 |
| hydrolase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| binding | 1 |
| catalytic activity | 1 |
| endopeptidase complex | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| centriole | 1 |
| microtubule organizing center | 1 |
| cytoplasm | 1 |
| proteasome complex | 1 |
| catalytic complex | 1 |
| proteasome core complex | 1 |
| protein-containing complex | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
2981 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PSMB5 | PSMB7 | Q99436 | 979 |
| PSMB5 | PSMB6 | P28072 | 973 |
| PSMB5 | PSMB2 | P31145 | 972 |
| PSMB5 | PSMB4 | P28070 | 957 |
| PSMB5 | PSMB1 | P20618 | 891 |
| PSMB5 | PSME1 | Q06323 | 855 |
| PSMB5 | PSME2 | Q9UL46 | 843 |
| PSMB5 | CTRL | P40313 | 832 |
| PSMB5 | PSMA6 | P34062 | 803 |
| PSMB5 | PSMA1 | P25786 | 803 |
| PSMB5 | PSMA5 | P28066 | 796 |
| PSMB5 | PSMC3 | P17980 | 788 |
| PSMB5 | PSMA4 | P25789 | 781 |
| PSMB5 | PSMA3 | P25788 | 781 |
| PSMB5 | PSMD1 | Q99460 | 776 |
IntAct
246 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PSMA1 | PSMA7 | psi-mi:“MI:0915”(physical association) | 0.950 |
| PSMA1 | PSMA7 | psi-mi:“MI:0914”(association) | 0.950 |
| PSMB7 | PSMB1 | psi-mi:“MI:0914”(association) | 0.900 |
| PSMA2 | PSMA7 | psi-mi:“MI:0914”(association) | 0.850 |
| UCHL5 | PSMD11 | psi-mi:“MI:0914”(association) | 0.840 |
| PSMA5 | PSMA7 | psi-mi:“MI:0914”(association) | 0.800 |
| PSMB7 | PSMA7 | psi-mi:“MI:0914”(association) | 0.790 |
| PSMB2 | PSMA7 | psi-mi:“MI:0914”(association) | 0.790 |
| PSMA2 | PSMB1 | psi-mi:“MI:0914”(association) | 0.790 |
| PSMB3 | PSMA7 | psi-mi:“MI:0914”(association) | 0.770 |
BioGRID (522): PSMB5 (Affinity Capture-RNA), PSMB5 (Affinity Capture-RNA), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-Western), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-MS), PSMB5 (Affinity Capture-MS), ACTN2 (Co-fractionation), ACTN4 (Co-fractionation), ASNA1 (Co-fractionation)
ESM2 similar proteins: A1XQU1, A2YXU2, A2Z3I9, A7KE01, A7KII6, O23710, O23712, O24030, O24361, O24362, O35955, O42265, O43063, O55234, P25043, P28062, P28063, P28064, P28074, P28075, P30655, P30656, P38624, P40306, P70195, P93395, Q09841, Q0J006, Q10329, Q2TBP0, Q3MHN0, Q3T0T1, Q3T112, Q4KM35, Q54BC8, Q54QR2, Q55GJ6, Q5R8S2, Q5RDH8, Q5W416
Diamond homologs: A0B5B1, A0JWY6, A0LU50, A0PQT3, A0QFB5, A0QZ47, A1KKF3, A1R6Q7, A1SK13, A1TAP4, A1UHS7, A2SS78, A3CUS9, A3Q193, A4FBY1, A4FYA5, A4TB64, A4X3P0, A4X744, A5U4D6, A5WP84, A6USJ3, A6VK02, A6W970, A7I841, A8LH54, A8M2A3, A9A788, A9WSI1, B0R4C8, B1L6S7, B1MAI2, B1W306, B2HFV6, B6YSW2, B8H8L6, B8ZRF3, B9LTS6, C0ZZU7, C1AQ26
SIGNOR signaling
5 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ixazomib | down-regulates | PSMB5 | “chemical inhibition” |
| “ixazomib citrate” | down-regulates | PSMB5 | “chemical inhibition” |
| carfilzomib | “down-regulates activity” | PSMB5 | “chemical inhibition” |
| bortezomib | “down-regulates activity” | PSMB5 | “chemical inhibition” |
| PSMB5 | “form complex” | “26S Proteasome” | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 137 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Antigen processing: Ub, ATP-independent proteasomal degradation | 11 | 69.8× | 6e-18 |
| Cross-presentation of soluble exogenous antigens (endosomes) | 18 | 50.8× | 4e-25 |
| Regulation of activated PAK-2p34 by proteasome mediated degradation | 16 | 49.5× | 1e-22 |
| Hh mutants are degraded by ERAD | 18 | 48.6× | 9e-25 |
| Regulation of ornithine decarboxylase (ODC) | 16 | 48.3× | 2e-22 |
| NIK–>noncanonical NF-kB signaling | 19 | 48.2× | 1e-25 |
| Proteasome assembly | 21 | 47.6× | 3e-28 |
| Vpu mediated degradation of CD4 | 16 | 47.2× | 2e-22 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| proteasome-mediated ubiquitin-dependent protein catabolic process | 26 | 11.2× | 3e-17 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
35 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 30 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
736 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 14:23026376:C:CC | acceptor_gain | 1.0000 |
| 14:23033362:A:C | donor_gain | 1.0000 |
| 14:23033481:T:TA | donor_gain | 1.0000 |
| 14:23026373:GGC:G | acceptor_gain | 0.9900 |
| 14:23026375:CCTG:C | acceptor_loss | 0.9900 |
| 14:23026377:T:C | acceptor_loss | 0.9900 |
| 14:23033363:CTC:C | donor_loss | 0.9900 |
| 14:23033364:TCAC:T | donor_loss | 0.9900 |
| 14:23033365:CA:C | donor_loss | 0.9900 |
| 14:23033367:C:CA | donor_loss | 0.9900 |
| 14:23033420:G:A | donor_gain | 0.9900 |
| 14:23033428:A:AC | donor_gain | 0.9900 |
| 14:23033429:C:CC | donor_gain | 0.9900 |
| 14:23033430:TGA:T | donor_gain | 0.9900 |
| 14:23033430:TGATA:T | donor_gain | 0.9900 |
| 14:23033670:CGGAA:C | acceptor_gain | 0.9900 |
| 14:23033671:GGAA:G | acceptor_gain | 0.9900 |
| 14:23033672:GAA:G | acceptor_gain | 0.9900 |
| 14:23033673:AA:A | acceptor_gain | 0.9900 |
| 14:23033673:AACT:A | acceptor_loss | 0.9900 |
| 14:23033674:AC:A | acceptor_loss | 0.9900 |
| 14:23033675:C:CA | acceptor_loss | 0.9900 |
| 14:23033675:C:CC | acceptor_gain | 0.9900 |
| 14:23033676:T:C | acceptor_loss | 0.9900 |
| 14:23033685:C:CT | acceptor_gain | 0.9900 |
| 14:23033686:A:T | acceptor_gain | 0.9900 |
| 14:23033360:TAAC:T | donor_loss | 0.9800 |
| 14:23033381:ATC:A | donor_gain | 0.9800 |
| 14:23033382:T:C | donor_gain | 0.9800 |
| 14:23033431:GATAC:G | donor_gain | 0.9800 |
AlphaMissense
1680 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 14:23026192:C:T | G230E | 1.000 |
| 14:23026312:C:T | G190D | 1.000 |
| 14:23026351:C:T | G177E | 1.000 |
| 14:23026352:C:A | G177W | 1.000 |
| 14:23026352:C:G | G177R | 1.000 |
| 14:23026352:C:T | G177R | 1.000 |
| 14:23033451:A:G | L141P | 1.000 |
| 14:23033457:G:A | S139F | 1.000 |
| 14:23033457:G:T | S139Y | 1.000 |
| 14:23033460:G:T | A138D | 1.000 |
| 14:23033493:A:G | L127P | 1.000 |
| 14:23033507:A:C | C122W | 1.000 |
| 14:23033533:A:G | W114R | 1.000 |
| 14:23033533:A:T | W114R | 1.000 |
| 14:23033540:G:C | C111W | 1.000 |
| 14:23033541:C:T | C111Y | 1.000 |
| 14:23033556:C:T | G106E | 1.000 |
| 14:23026154:A:G | W243R | 0.999 |
| 14:23026154:A:T | W243R | 0.999 |
| 14:23026192:C:A | G230V | 0.999 |
| 14:23026203:A:C | D226E | 0.999 |
| 14:23026203:A:T | D226E | 0.999 |
| 14:23026204:T:A | D226V | 0.999 |
| 14:23026204:T:G | D226A | 0.999 |
| 14:23026205:C:G | D226H | 0.999 |
| 14:23026217:C:G | A222P | 0.999 |
| 14:23026229:C:G | A218P | 0.999 |
| 14:23026237:G:T | A215D | 0.999 |
| 14:23026300:G:T | A194E | 0.999 |
| 14:23026310:A:G | S191P | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000241514 (14:23034200 G>A), RS1000394877 (14:23026598 C>G,T), RS1000456302 (14:23034468 C>G,T), RS1000494257 (14:23031031 G>A), RS1000626744 (14:23036299 A>G,T), RS1000698209 (14:23034509 C>A,G), RS1000718527 (14:23026547 T>A), RS1000728302 (14:23029039 C>T), RS1000778986 (14:23029396 C>T), RS1000977534 (14:23035967 G>A,C), RS1001176894 (14:23025631 ATC>A), RS1002408953 (14:23030613 A>C), RS1002742888 (14:23032167 G>A,T), RS1002795609 (14:23032486 A>G), RS1003044590 (14:23026622 G>T)
Disease associations
OMIM: gene MIM:600306 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
19 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004602_175 | Mean corpuscular volume | 3.000000e-15 |
| GCST004611_195 | High light scatter reticulocyte count | 1.000000e-23 |
| GCST004612_129 | High light scatter reticulocyte percentage of red cells | 3.000000e-26 |
| GCST004619_43 | Reticulocyte fraction of red cells | 4.000000e-39 |
| GCST004621_64 | Red cell distribution width | 2.000000e-96 |
| GCST004622_126 | Reticulocyte count | 4.000000e-34 |
| GCST004630_197 | Mean corpuscular hemoglobin | 1.000000e-15 |
| GCST006804_17 | Red cell distribution width | 2.000000e-85 |
| GCST90002385_19 | High light scatter reticulocyte count | 2.000000e-70 |
| GCST90002386_162 | High light scatter reticulocyte percentage of red cells | 1.000000e-76 |
| GCST90002387_137 | Immature fraction of reticulocytes | 2.000000e-22 |
| GCST90002390_200 | Mean corpuscular hemoglobin | 2.000000e-45 |
| GCST90002391_254 | Mean corpuscular hemoglobin concentration | 3.000000e-12 |
| GCST90002392_420 | Mean corpuscular volume | 2.000000e-38 |
| GCST90002397_70 | Mean spheric corpuscular volume | 3.000000e-11 |
| GCST90002404_386 | Red cell distribution width | 3.000000e-243 |
| GCST90002404_387 | Red cell distribution width | 1.000000e-14 |
| GCST90002405_362 | Reticulocyte count | 2.000000e-72 |
| GCST90002406_415 | Reticulocyte fraction of red cells | 2.000000e-84 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007986 | reticulocyte count |
| EFO:0009188 | Red cell distribution width |
| EFO:0004527 | mean corpuscular hemoglobin |
| EFO:0004528 | mean corpuscular hemoglobin concentration |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (4): CHEMBL2364701 (PROTEIN COMPLEX), CHEMBL3831201 (PROTEIN COMPLEX GROUP), CHEMBL3885625 (PROTEIN FAMILY), CHEMBL4662 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
15 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 743,741 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL325041 | BORTEZOMIB | 4 | 13,120 |
| CHEMBL451887 | CARFILZOMIB | 4 | 12,508 |
| CHEMBL159 | VINBLASTINE | 4 | 412,636 |
| CHEMBL3545432 | IXAZOMIB CITRATE | 4 | 2,453 |
| CHEMBL2141296 | IXAZOMIB | 3 | 6,022 |
| CHEMBL371405 | MARIZOMIB | 3 | 7,332 |
| CHEMBL140 | CURCUMIN | 3 | 93,882 |
| CHEMBL297453 | EPIGALOCATECHIN GALLATE | 3 | 22,804 |
| CHEMBL50 | QUERCETIN | 3 | 74,559 |
| CHEMBL2103884 | OPROZOMIB | 2 | 2,738 |
| CHEMBL151 | LUTEOLIN | 2 | 23,523 |
| CHEMBL270515 | DELANZOMIB | 2 | 1,883 |
| CHEMBL4297468 | ZETOMIPZOMIB | 2 | 129 |
| CHEMBL44 | GENISTEIN | 2 | 44,212 |
| CHEMBL150 | KAEMPFEROL | 1 | 25,940 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — T1: Proteasome
Most potent curated ligand interactions (9 total), top 9:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| ixazomib | Inhibition | 9.03 | pKi |
| NIC-0102 | Inhibition | 8.43 | pIC50 |
| MG-132 | Inhibition | 8.43 | pKi |
| compound 3b [PMID: 24946214] | Inhibition | 8.29 | pKi |
| carfilzomib | Inhibition | 8.24 | pIC50 |
| oprozomib | Inhibition | 8.0 | pIC50 |
| bortezomib | Inhibition | 7.7 | pIC50 |
| zetomipzomib | Inhibition | 6.16 | pIC50 |
| WLL-vs | Inhibition | 6.0 | pIC50 |
Binding affinities (BindingDB)
100 measured of 147 human assays (147 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| CHEMBL1169560 | IC50 | 4.3 nM | |
| CHEMBL1169561 | IC50 | 7.6 nM | |
| CARFILZOMIB | IC50 | 8.6 nM | |
| [(1R)-1-[[2-[(3,5-dichloro-2-pyridinyl)oxy]acetyl]amino]-2-phenylethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-1-[(2-phenoxyacetyl)amino]-2-phenylethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(4-methylphenyl)-1-(3-phenoxypropanoylamino)ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-1-[3-(4-methoxyphenoxy)propanoylamino]-2-(4-methylphenyl)ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[(2-phenylacetyl)amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[(2-pyridin-3-ylacetyl)amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(4-cyanophenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(4-methoxyphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[(2-pyridin-3-yloxyacetyl)amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(6-methoxy-2-pyridinyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(5-ethoxy-2-pyridinyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(3-methoxyphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[(2-pyrazin-2-ylacetyl)amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[(2-pyrimidin-2-ylacetyl)amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(3,4,5-trifluorophenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-1-[[2-(4-acetamidophenyl)acetyl]amino]-2-(1-benzofuran-3-yl)ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(2-methoxyphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(4-ethoxyphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[3-(3-hydroxypropoxy)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-1-[[2-(3-acetamidophenyl)acetyl]amino]-2-(1-benzofuran-3-yl)ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[4-(2-hydroxyethoxy)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[4-(3-hydroxypropoxy)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[3-(2-hydroxyethoxy)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[3-(methoxymethyl)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(3,4,5-trimethoxyphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[2-(oxan-4-yloxy)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(2,5-dimethoxyphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[(2R)-3-hydroxy-2-phenylpropanoyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(2,3,4-trimethoxyphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[4-(2-oxopyrrolidin-1-yl)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[4-(2-hydroxypropan-2-yl)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(7-methoxy-1-benzofuran-3-yl)-1-[(2-phenylacetyl)amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(7-fluoro-1-benzofuran-3-yl)-1-[(2-phenylacetyl)amino]ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-[(3S)-2,3-dihydro-1-benzofuran-3-yl]-1-(3-phenoxypropanoylamino)ethyl]boronic acid | IC50 | 275 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| CHEMBL4563143 | IC50 | 638 nM | |
| CHEMBL4544082 | IC50 | 853 nM | |
| [(1R)-2-phenyl-1-[(2-pyridin-2-yloxyacetyl)amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(4-methylphenyl)-1-[(2-phenylacetyl)amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-1-[[(2R)-2-hydroxy-2-phenylacetyl]amino]-2-(4-methylphenyl)ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[(2-pyridin-4-ylacetyl)amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[(2,2-difluoro-2-phenylacetyl)amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[2-(trifluoromethyl)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-(2,6-dichlorophenyl)acetyl]amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[2-[2-(trifluoromethoxy)phenyl]acetyl]amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[(2S)-2-methoxy-2-phenylacetyl]amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(1-benzofuran-3-yl)-1-[[(2R)-2-methoxy-2-phenylacetyl]amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
| [(1R)-2-(2,4-dimethylphenyl)-1-[[2-(2,6-dimethylphenyl)acetyl]amino]ethyl]boronic acid | IC50 | 2750 nM | US-10294246: Substituted boronic acids and boronate esters as immunoproteasome inhibitors |
ChEMBL bioactivities
1663 potent at pChembl≥5 of 1872 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.10 | IC50 | 0.08 | nM | CHEMBL3347481 |
| 9.89 | Ki | 0.13 | nM | CHEMBL4749207 |
| 9.85 | Ki | 0.14 | nM | CHEMBL3629678 |
| 9.66 | IC50 | 0.22 | nM | CHEMBL3347627 |
| 9.52 | IC50 | 0.3 | nM | CHEMBL4070336 |
| 9.47 | IC50 | 0.34 | nM | CHEMBL3347641 |
| 9.42 | IC50 | 0.38 | nM | CHEMBL3347480 |
| 9.41 | IC50 | 0.39 | nM | CHEMBL3347642 |
| 9.40 | IC50 | 0.4 | nM | CHEMBL3347625 |
| 9.38 | IC50 | 0.42 | nM | CHEMBL3347640 |
| 9.30 | Ki | 0.5 | nM | CHEMBL207598 |
| 9.30 | IC50 | 0.5 | nM | BORTEZOMIB |
| 9.29 | Ki | 0.51 | nM | CHEMBL205757 |
| 9.26 | Ki | 0.55 | nM | BORTEZOMIB |
| 9.26 | IC50 | 0.55 | nM | CHEMBL3347626 |
| 9.22 | Ki | 0.6 | nM | BORTEZOMIB |
| 9.22 | IC50 | 0.6 | nM | CHEMBL4061262 |
| 9.22 | IC50 | 0.6 | nM | CINNABARAMIDE G |
| 9.22 | Ki | 0.6 | nM | CHEMBL5624541 |
| 9.19 | Ki | 0.65 | nM | CHEMBL206413 |
| 9.15 | IC50 | 0.7 | nM | CHEMBL4104744 |
| 9.15 | IC50 | 0.7079 | nM | CHEMBL5206237 |
| 9.14 | Ki | 0.72 | nM | CHEMBL377532 |
| 9.14 | Ki | 0.72 | nM | CHEMBL383674 |
| 9.12 | IC50 | 0.76 | nM | CHEMBL3793848 |
| 9.10 | IC50 | 0.8 | nM | CHEMBL4747480 |
| 9.05 | IC50 | 0.9 | nM | CHEMBL4102324 |
| 9.05 | IC50 | 0.9 | nM | CHEMBL4794118 |
| 9.04 | IC50 | 0.92 | nM | CHEMBL4102324 |
| 9.03 | Ki | 0.93 | nM | IXAZOMIB CITRATE |
| 9.00 | IC50 | 1 | nM | CHEMBL4064404 |
| 9.00 | IC50 | 1 | nM | CHEMBL4078056 |
| 9.00 | IC50 | 1 | nM | CINNABARAMIDE A |
| 9.00 | IC50 | 1 | nM | CHEMBL5208208 |
| 9.00 | Ki | 1.01 | nM | CHEMBL5569360 |
| 9.00 | IC50 | 1 | nM | CHEMBL578478 |
| 8.99 | IC50 | 1.02 | nM | CHEMBL3786398 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL204992 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL4072652 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL3218837 |
| 8.95 | IC50 | 1.12 | nM | CHEMBL3794168 |
| 8.95 | IC50 | 1.122 | nM | CHEMBL5183504 |
| 8.94 | IC50 | 1.16 | nM | CHEMBL3793238 |
| 8.94 | IC50 | 1.15 | nM | CHEMBL3793581 |
| 8.94 | IC50 | 1.16 | nM | CHEMBL3794310 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL3218837 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL499361 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL4078693 |
| 8.92 | IC50 | 1.2 | nM | MG-132 |
| 8.92 | IC50 | 1.202 | nM | CHEMBL5196305 |
PubChem BioAssay actives
1462 with measured affinity, of 3363 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [(1R)-1-[[(2S)-2-(3,4-dihydro-1H-isoquinoline-2-carbonylamino)-3-phenylpropanoyl]amino]-3-methylbutyl]boronic acid | 1459637: Inhibition of chymotrypsin-like activity of 20S proteasome in human HL60 cells using Suc-LLVYaminoluciferin as substrate after 2 hrs by fluorescence analysis | ic50 | <0.0001 | uM |
| [(1R)-1-[[(2S)-2-[[2-(4-hydroxyphenyl)acetyl]amino]-3-phenylpropanoyl]amino]-3-methylbutyl]boronic acid | 1687111: Binding affinity to human 20S constitutive proteasome beta 5 subunit assessed as equilibrium constant using fluorogenic peptide Ac-WLA-AMC as substrate in presence of PA28alpha by fluorescence based microplate reader assay | ki | 0.0001 | uM |
| N-[(2S)-1-[[(3E,5S,8S,9E)-2,7-dioxo-5-propan-2-yl-1,6-diazacyclododeca-3,9-dien-8-yl]amino]-1-oxo-3-phenylpropan-2-yl]decanamide | 1252350: Inhibition of proteasome beta-5 (unknown origin) | ki | 0.0001 | uM |
| [(1R)-3-methyl-1-[[(2S)-3-phenyl-2-[(3-phenylphenyl)methylcarbamoylamino]propanoyl]amino]butyl]boronic acid | 1459637: Inhibition of chymotrypsin-like activity of 20S proteasome in human HL60 cells using Suc-LLVYaminoluciferin as substrate after 2 hrs by fluorescence analysis | ic50 | 0.0003 | uM |
| (2S)-N-[(2S)-1-[[(2S)-1-[5-[4-(dimethylamino)phenyl]-1,3,4-oxadiazol-2-yl]-4-methyl-1-oxopentan-2-yl]amino]-3-methoxy-1-oxopropan-2-yl]-N’-(2,2-dimethylpropyl)-2-[(4-methylphenyl)sulfonylamino]butanediamide | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ki | 0.0005 | uM |
| (2S)-N-[(2S)-1-[[(2S)-1-[5-[4-(dimethylamino)phenyl]-1,3,4-oxadiazol-2-yl]-4-methyl-1-oxopentan-2-yl]amino]-1-oxopropan-2-yl]-N’-(2,2-dimethylpropyl)-2-[(4-methylphenyl)sulfonylamino]butanediamide | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ki | 0.0005 | uM |
| Bortezomib | 1382147: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-MCA as substrate measured for 1 hr by fluorescence assay | ic50 | 0.0005 | uM |
| (2S)-N’-(2,2-dimethylpropyl)-N-[(2S)-1-[[(2S)-4-methyl-1-oxo-1-(5-phenyl-1,3,4-oxadiazol-2-yl)pentan-2-yl]amino]-1-oxopropan-2-yl]-2-[(3-methylphenyl)sulfonylamino]butanediamide | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ki | 0.0006 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-pyrazin-2-ylpiperidine-1,4-dicarboxamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0006 | uM |
| methyl (2R)-2-acetamido-3-[(2R,3S,4R)-2-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbonyl]sulfanylpropanoate | 277357: Inhibition of human 20S proteasome | ic50 | 0.0006 | uM |
| [(1R)-1-[[(2S)-1-amino-1-oxo-3-phenylpropan-2-yl]-(pyrazine-2-carbonyl)amino]-3-methylbutyl]boronic acid | 2131634: Binding affinity to 20s proteosome (unknown origin) assessed as inhibition constant | ki | 0.0006 | uM |
| (2S)-N’-(2,2-dimethylpropyl)-N-[(2S)-1-[[(2S)-4-methyl-1-oxo-1-(5-phenyl-1,3,4-oxadiazol-2-yl)pentan-2-yl]amino]-1-oxopropan-2-yl]-2-[(4-methylphenyl)sulfonylamino]butanediamide | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ki | 0.0007 | uM |
| (2S,3R)-N-[(2S)-3-(cyclopenten-1-yl)-1-[(2R)-2-methyloxiran-2-yl]-1-oxopropan-2-yl]-3-hydroxy-3-(4-methoxyphenyl)-2-[[(2S)-2-[(2-morpholin-4-ylacetyl)amino]propanoyl]amino]propanamide | 1604186: Inhibition of 20S proteasome beta 5c (unknown origin) after 1 hr by fluorescence based assay | ic50 | 0.0007 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0007 | uM |
| [(1R)-1-[[(2S)-2-[(2,5-dichlorobenzoyl)amino]-3-methylbutanoyl]amino]-3-methylbutyl]boronic acid | 1864383: Inhibition of 20S proteasome beta5 subunit (unknown origin) using Suc-LLVY-AMC as flurogenic substrate measured after 1 hr by fluorescence based analysis | ic50 | 0.0007 | uM |
| (2S)-N’-(2,2-dimethylpropyl)-N-[(2S)-3-methoxy-1-[[(2S)-4-methyl-1-oxo-1-(5-phenyl-1,3,4-oxadiazol-2-yl)pentan-2-yl]amino]-1-oxopropan-2-yl]-2-[(4-methylphenyl)sulfonylamino]butanediamide | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ki | 0.0007 | uM |
| N-[(2S)-1-[[(1R)-3-methyl-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]amino]-1-oxo-3-phenylpropan-2-yl]-5,6,7,8-tetrahydronaphthalene-1-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0008 | uM |
| 1-N-[(2S)-5-(tert-butylamino)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-1,5-dioxopentan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1683221: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition by fluorescence assay | ic50 | 0.0008 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0009 | uM |
| 1-N-[(2S)-5-(tert-butylamino)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-1,5-dioxopentan-2-yl]-4-N-pyrazin-2-ylpiperidine-1,4-dicarboxamide | 1683221: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition by fluorescence assay | ic50 | 0.0009 | uM |
| 2-[4-(carboxymethyl)-2-[(1R)-1-[[2-[(2,5-dichlorobenzoyl)amino]acetyl]amino]-3-methylbutyl]-5-oxo-1,3,2-dioxaborolan-4-yl]acetic acid | 2131635: Binding affinity to 20s proteasome beta5 site (unknown origin) mediated chymotrypsin-like activity assessed as inhibition constant | ki | 0.0009 | uM |
| [(1S)-1-[[3-(3-fluorophenyl)-3-[[(1S)-1,2,3,4-tetrahydronaphthalene-1-carbonyl]amino]propanoyl]amino]-3-methylbutyl]boronic acid | 1291318: Inhibition of chymotrypsin like activity of human erythrocyte-derived 20S proteasome preincubated for 10 mins using Suc-LLVY-AMC as substrate after 60 mins by fluorescence assay | ic50 | 0.0010 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-pyridin-2-ylpiperidine-1,4-dicarboxamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0010 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-(1,3-thiazol-2-ylmethyl)piperidine-1,4-dicarboxamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0010 | uM |
| [(1R)-1-[[(2S)-2-[(2,5-dichlorobenzoyl)amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-methylbutyl]boronic acid | 1864383: Inhibition of 20S proteasome beta5 subunit (unknown origin) using Suc-LLVY-AMC as flurogenic substrate measured after 1 hr by fluorescence based analysis | ic50 | 0.0010 | uM |
| N-[(2S)-1-[[(3E,5S,8S)-5-benzyl-2,7-dioxo-1,6-diazacyclododec-3-en-8-yl]amino]-1-oxo-3-phenylpropan-2-yl]decanamide | 2108291: Inhibition of 20S proteasome beta-5 in human erythrocytes using Suc-LLVY-AMC as substrate by AK-740 assay | ki | 0.0010 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-azido-3-phenylpropanoyl]amino]-3-phenylpropanoyl]amino]-N-[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]-3-phenylpropanamide | 459970: Inhibition of 26S proteasome beta 5 using LLVY as substrate | ic50 | 0.0010 | uM |
| (1R,4R,5S)-1-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-4-hexyl-5-methyl-6-oxa-2-azabicyclo[3.2.0]heptane-3,7-dione | 277357: Inhibition of human 20S proteasome | ic50 | 0.0010 | uM |
| tert-butyl (4S)-5-[[(2S)-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-[[(2S,3S)-3-methyl-2-(phenylmethoxycarbonylamino)pentanoyl]amino]-5-oxopentanoate | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ki | 0.0010 | uM |
| tert-butyl (4S)-4-(benzenesulfonamido)-5-[[(2S)-3-hydroxy-1-[[(E,3S)-5-methyl-1-methylsulfonylhex-1-en-3-yl]amino]-1-oxopropan-2-yl]amino]-5-oxopentanoate | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ic50 | 0.0011 | uM |
| N-[(2S)-4-methyl-1-[[(1R)-3-methyl-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]amino]-1-oxopentan-2-yl]-5,6,7,8-tetrahydronaphthalene-1-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0011 | uM |
| (1S)-N-[(2S)-1-[[(1R)-3-methyl-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]amino]-1-oxo-3-phenylpropan-2-yl]-1,2,3,4-tetrahydronaphthalene-1-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0011 | uM |
| (2S)-N-[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]-N’-(2,2-dimethylpropyl)-2-[[4-(pyrazine-2-carbonylamino)piperidine-1-carbonyl]amino]butanediamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0011 | uM |
| [(1R)-1-[[(2S)-2-[(2,3-difluorobenzoyl)amino]-3-phenylpropanoyl]amino]-3-methylbutyl]boronic acid | 1864383: Inhibition of 20S proteasome beta5 subunit (unknown origin) using Suc-LLVY-AMC as flurogenic substrate measured after 1 hr by fluorescence based analysis | ic50 | 0.0011 | uM |
| (2S)-N-[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-3-pyridin-4-ylpropan-2-yl]-N’-(2,2-dimethylpropyl)-2-[[2-(1H-indol-3-yl)-2-oxoacetyl]amino]butanediamide | 1436355: Inhibition of 20s constitutive proteasome chymotrypsin-like activity in human erythrocyte using Ac-WLA-AMC as substrate in presence of proteasomal activator 28alpha by fluorimetric method | ic50 | 0.0011 | uM |
| N-[(2S)-1-[[(1R)-2-(4-methylphenyl)-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]ethyl]amino]-1-oxo-3-phenylpropan-2-yl]-1,2,3,4-tetrahydronaphthalene-2-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0012 | uM |
| N-[(2S)-1-[[(1R)-3-methyl-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]amino]-3-naphthalen-2-yl-1-oxopropan-2-yl]-5,6,7,8-tetrahydronaphthalene-1-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0012 | uM |
| (2S)-N-[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]-N’-(2,2-dimethylpropyl)-2-[[4-[(4-fluorobenzoyl)amino]piperidine-1-carbonyl]amino]butanediamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0012 | uM |
| [(1R)-1-[[(2S)-2-[(2,3-dichlorobenzoyl)amino]-3-phenylpropanoyl]amino]-3-methylbutyl]boronic acid | 1864383: Inhibition of 20S proteasome beta5 subunit (unknown origin) using Suc-LLVY-AMC as flurogenic substrate measured after 1 hr by fluorescence based analysis | ic50 | 0.0012 | uM |
| [(1R)-3-methyl-1-[[(2S)-3-phenyl-2-[[(1S)-1,2,3,4-tetrahydronaphthalene-1-carbonyl]amino]propanoyl]amino]butyl]boronic acid | 1291318: Inhibition of chymotrypsin like activity of human erythrocyte-derived 20S proteasome preincubated for 10 mins using Suc-LLVY-AMC as substrate after 60 mins by fluorescence assay | ic50 | 0.0012 | uM |
| benzyl N-[(2S)-4-methyl-1-[[(2S)-4-methyl-1-[[(2S)-4-methyl-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopentan-2-yl]carbamate | 1515537: Inhibition of chymotrypsin like activity of 26S proteasome beta 5 subunit (unknown origin) by fluorescence assay | ic50 | 0.0012 | uM |
| (1R,4R,5S)-4-(2-chloroethyl)-1-[(S)-[(1S)-cyclohex-2-en-1-yl]-hydroxymethyl]-5-methyl-6-oxa-2-azabicyclo[3.2.0]heptane-3,7-dione | 1853759: Inhibition of 20S proteasome (unknown origin) by fluorescence based assay | ic50 | 0.0013 | uM |
| N-[(2S)-1-[[(1R)-3-methyl-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]amino]-3-naphthalen-1-yl-1-oxopropan-2-yl]-5,6,7,8-tetrahydronaphthalene-1-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0013 | uM |
| (1S)-N-[(2S)-1-[[(1R)-2-(4-fluorophenyl)-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]ethyl]amino]-1-oxo-3-phenylpropan-2-yl]-1,2,3,4-tetrahydronaphthalene-1-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0013 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-1-oxo-4-phenylbutan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1325161: Inhibition of chymotrypsin-like activity of human 20S proteasome preincubated for 15 mins followed by addition of Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence analysis | ic50 | 0.0014 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-5-(2,2-dimethylpropylamino)-1,5-dioxopentan-2-yl]-4-N-pyridin-3-ylpiperidine-1,4-dicarboxamide | 1683221: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 15 mins followed by substrate addition by fluorescence assay | ic50 | 0.0014 | uM |
| benzyl N-[(2S,3S)-1-[[(2S)-4-(2,2-dimethylpropylamino)-1-[[(2S)-1-[[(E,3S)-5-methyl-1-methylsulfonylhex-1-en-3-yl]amino]-1-oxopropan-2-yl]amino]-1,4-dioxobutan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]carbamate | 264535: Inhibition of chymotrypsin-like proteasome activity of human 20S proteasome | ic50 | 0.0015 | uM |
| N-[(2S)-1-[[(1R)-3-methyl-1-[(1S,2S,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]amino]-1-oxo-3-phenylpropan-2-yl]-1,2,3,4-tetrahydronaphthalene-2-carboxamide | 1295429: Inhibition of chymotrypsin like activity of human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate preincubated for 10 mins followed by substrate addition measured after 1 hr by spectrofluorimetric analysis | ic50 | 0.0015 | uM |
| 1-N-[(2S)-1-[[(2S)-1-[(2-chlorophenyl)methylamino]-1-oxo-4-phenylbutan-2-yl]amino]-4-(2,2-dimethylpropylamino)-1,4-dioxobutan-2-yl]-4-N-(4-fluorophenyl)piperidine-1,4-dicarboxamide | 1436349: Inhibition of chymotrypsin-like activity of human 20S proteasome pretreated for 15 mins followed by Suc-Leu-Leu-Val-Tyr-AMC substrate addition by fluorescence assay | ic50 | 0.0015 | uM |
| 1-N-[(2S)-4-methyl-1-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopentan-2-yl]-4-N-(1,3-thiazol-2-yl)piperidine-1,4-dicarboxamide | 1624025: Inhibition of human 20S proteasome preincubated for 15 mins followed by substrate addition | ic50 | 0.0015 | uM |
CTD chemical–gene interactions
52 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | increases abundance, decreases reaction, increases reaction, affects expression, affects cotreatment (+3 more) | 5 |
| Resveratrol | affects cotreatment, increases expression, affects reaction, decreases secretion, decreases expression | 3 |
| benzyloxycarbonylleucyl-leucyl-leucine aldehyde | decreases reaction, increases expression, decreases expression, increases reaction, affects cotreatment | 2 |
| Arsenic | decreases expression, increases abundance, affects cotreatment, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| bisphenol F | increases expression | 1 |
| bisphenol A | decreases expression | 1 |
| nobiletin | decreases expression, decreases reaction | 1 |
| sodium arsenate | decreases expression, decreases reaction | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, decreases expression | 1 |
| beta-lapachone | decreases expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| tanshinone | increases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| arsenic trichloride | decreases expression, increases abundance | 1 |
| sibutramine | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CV 6504 | decreases reaction, increases expression | 1 |
| chloropicrin | affects expression | 1 |
| K 7174 | decreases expression | 1 |
| bisphenol B | increases expression | 1 |
| stattic | increases expression, decreases expression, decreases reaction | 1 |
| WP1066 | decreases reaction, increases expression, decreases expression | 1 |
| EGFR tyrosine kinase inhibitor 324674 | decreases reaction, increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Bortezomib | affects binding, decreases response to substance, affects response to substance | 1 |
| Air Pollutants | decreases expression, increases abundance | 1 |
| Atrazine | increases expression | 1 |
| Cannabidiol | affects cotreatment, decreases expression | 1 |
| Clozapine | affects cotreatment, increases expression | 1 |
ChEMBL screening assays
486 unique, capped per target: 466 binding, 15 admet, 5 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3222879 | Binding | Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition measured after 90 mins by fluorescence assay | Oxathiazole-2-one derivative of bortezomib: Synthesis, stability and proteasome inhibition activity — Medchemcomm |
| CHEMBL4736581 | ADMET | Inhibition of human 20S proteasome stably expressed in HEK293 cells at 5 to 50 uM using succinyl-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition and measured at 3 mins interval for 30 mins by fluorescence assay | A covalent p97/VCP ATPase inhibitor can overcome resistance to CB-5083 and NMS-873 in colorectal cancer cells. — Eur J Med Chem |
| CHEMBL834792 | Functional | Inhibitory concentration to inhibit trypsin-like activity of 20S proteasome from human leukemia HL-60 cells was determined | Structure-based design of derivatives of tyropeptin A as the potent and selective inhibitors of mammalian 20S proteasome. — Bioorg Med Chem Lett |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: Bortezomib, Carfilzomib, Ixazomib