PSMD6-AS2

Summary

PSMD6-AS2 (PSMD6 antisense RNA 2, HGNC:44125) is a long non-coding RNA gene on chromosome 3p14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44125
Approved symbol	PSMD6-AS2
Name	PSMD6 antisense RNA 2
Location	3p14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000239653
Ensembl biotype	lncRNA
Entrez	100507062
RNAcentral	URS000075EC82 — lncRNA, 2555 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000472046

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000472046 — 3 exons

Exon	Start	End
ENSE00001835806	64009697	64009753
ENSE00001930731	64004022	64006068
ENSE00001947237	64011797	64012148

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 91.35.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	91.35	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.26	gold quality
bone marrow cell	CL:0002092	77.19	gold quality
bone marrow	UBERON:0002371	75.94	gold quality
calcaneal tendon	UBERON:0003701	75.90	gold quality
sural nerve	UBERON:0015488	74.90	gold quality
body of pancreas	UBERON:0001150	74.30	gold quality
monocyte	CL:0000576	73.35	gold quality
leukocyte	CL:0000738	72.67	gold quality
colonic epithelium	UBERON:0000397	72.18	gold quality
granulocyte	CL:0000094	69.65	gold quality
blood	UBERON:0000178	69.60	gold quality
stromal cell of endometrium	CL:0002255	68.97	gold quality
gastrocnemius	UBERON:0001388	68.96	gold quality
pancreas	UBERON:0001264	68.91	gold quality
skeletal muscle tissue	UBERON:0001134	68.77	gold quality
muscle of leg	UBERON:0001383	68.35	gold quality
tonsil	UBERON:0002372	68.21	gold quality
adrenal tissue	UBERON:0018303	67.30	gold quality
mucosa of stomach	UBERON:0001199	66.77	gold quality
descending thoracic aorta	UBERON:0002345	66.61	gold quality
endometrium	UBERON:0001295	65.76	gold quality
lower esophagus muscularis layer	UBERON:0035833	65.72	gold quality
lower esophagus	UBERON:0013473	65.69	gold quality
tibial artery	UBERON:0007610	65.27	gold quality
popliteal artery	UBERON:0002250	65.24	gold quality
right lung	UBERON:0002167	64.91	gold quality
muscle layer of sigmoid colon	UBERON:0035805	64.82	gold quality
vermiform appendix	UBERON:0001154	64.77	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	64.71	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.