PSMD7
gene geneOn this page
Also known as S12P40MOV34Rpn8
Summary
PSMD7 (proteasome 26S subunit, non-ATPase 7, HGNC:9565) is a protein-coding gene on chromosome 16q23.1, encoding 26S proteasome non-ATPase regulatory subunit 7 (P51665). Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. It is a common-essential gene (DepMap: required in 99.8% of cancer cell lines).
The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a non-ATPase subunit of the 19S regulator. A pseudogene has been identified on chromosome 17.
Source: NCBI Gene 5713 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 46 total
- Druggable target: yes — 2 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 99.8% of screened cell lines (common-essential)
- MANE Select transcript:
NM_002811
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:9565 |
| Approved symbol | PSMD7 |
| Name | proteasome 26S subunit, non-ATPase 7 |
| Location | 16q23.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | S12, P40, MOV34, Rpn8 |
| Ensembl gene | ENSG00000103035 |
| Ensembl biotype | protein_coding |
| OMIM | 157970 |
| Entrez | 5713 |
Gene structure
Transcript identifiers
Ensembl transcripts: 8 — 5 protein_coding, 2 retained_intron, 1 nonsense_mediated_decay
ENST00000219313, ENST00000563150, ENST00000566015, ENST00000567958, ENST00000568615, ENST00000568717, ENST00000937729, ENST00000937730
RefSeq mRNA: 1 — MANE Select: NM_002811
NM_002811
CCDS: CCDS10910
Canonical transcript exons
ENST00000219313 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000874844 | 74296814 | 74296988 |
| ENSE00000874845 | 74305289 | 74306288 |
| ENSE00003475228 | 74304303 | 74304394 |
| ENSE00003536114 | 74301052 | 74301144 |
| ENSE00003607341 | 74302212 | 74302292 |
| ENSE00003644424 | 74301555 | 74301652 |
| ENSE00003670943 | 74300115 | 74300206 |
Expression profiles
Bgee: expression breadth ubiquitous, 297 present calls, max score 98.50.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 94.7336 / max 642.6341, expressed in 1827 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 155003 | 91.2929 | 1827 |
| 155004 | 3.4407 | 1562 |
Top tissues by expression
301 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| gastrocnemius | UBERON:0001388 | 98.50 | gold quality |
| muscle of leg | UBERON:0001383 | 98.37 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 98.14 | gold quality |
| muscle organ | UBERON:0001630 | 98.04 | gold quality |
| skeletal muscle organ | UBERON:0014892 | 98.04 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 97.66 | gold quality |
| skin of leg | UBERON:0001511 | 97.42 | gold quality |
| heart left ventricle | UBERON:0002084 | 97.39 | gold quality |
| skin of abdomen | UBERON:0001416 | 97.34 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 97.27 | gold quality |
| deltoid | UBERON:0001476 | 97.26 | gold quality |
| gluteal muscle | UBERON:0002000 | 97.26 | gold quality |
| cardiac ventricle | UBERON:0002082 | 97.23 | gold quality |
| vastus lateralis | UBERON:0001379 | 97.20 | gold quality |
| monocyte | CL:0000576 | 97.19 | gold quality |
| quadriceps femoris | UBERON:0001377 | 97.17 | gold quality |
| right atrium auricular region | UBERON:0006631 | 97.17 | gold quality |
| rectum | UBERON:0001052 | 97.10 | gold quality |
| tibial artery | UBERON:0007610 | 97.05 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 97.05 | gold quality |
| popliteal artery | UBERON:0002250 | 97.04 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 97.04 | gold quality |
| islet of Langerhans | UBERON:0000006 | 97.02 | gold quality |
| left adrenal gland | UBERON:0001234 | 97.02 | gold quality |
| right adrenal gland | UBERON:0001233 | 97.01 | gold quality |
| adrenal tissue | UBERON:0018303 | 97.00 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 96.92 | gold quality |
| lower esophagus | UBERON:0013473 | 96.91 | gold quality |
| mononuclear cell | CL:0000842 | 96.90 | gold quality |
| stromal cell of endometrium | CL:0002255 | 96.89 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6701 | yes | 37.82 |
| E-MTAB-6911 | no | 492.86 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
44 targeting PSMD7, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-4487 | 99.96 | 64.58 | 1252 |
| HSA-MIR-338-5P | 99.92 | 72.34 | 2951 |
| HSA-MIR-497-5P | 99.92 | 71.83 | 2674 |
| HSA-MIR-15A-5P | 99.90 | 72.80 | 2787 |
| HSA-MIR-15B-5P | 99.90 | 72.78 | 2798 |
| HSA-MIR-16-5P | 99.90 | 72.80 | 2780 |
| HSA-MIR-195-5P | 99.90 | 72.81 | 2805 |
| HSA-MIR-424-5P | 99.89 | 71.90 | 2641 |
| HSA-MIR-6838-5P | 99.89 | 71.94 | 2690 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-6515-3P | 99.82 | 68.19 | 1933 |
| HSA-MIR-8076 | 99.78 | 68.52 | 1170 |
| HSA-MIR-548AG | 99.77 | 69.25 | 1492 |
| HSA-MIR-548AI | 99.69 | 69.24 | 1494 |
| HSA-MIR-548BA | 99.69 | 69.14 | 1514 |
| HSA-MIR-570-5P | 99.69 | 69.24 | 1494 |
| HSA-MIR-1303 | 99.65 | 69.77 | 1662 |
| HSA-MIR-6513-3P | 99.59 | 69.77 | 1102 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 99.8% of screened cell lines, common-essential.
Literature-anchored findings (GeneRIF, showing 8)
- hVIP is a member of the complex array of nucleocytoplasmic shuttling proteins that are regulated by HIV infection and glucocorticoids (PMID:12237292)
- data suggest a differential nuclear function of modified and unmodified S12 in cancer (PMID:15221960)
- MPN domain of Mov34 is highly resistant to proteolysis (PMID:16842755)
- although the MPN domain of Mov34 shows a typical metalloprotease fold, it is unable to coordinate a metal ion. (PMID:17559875)
- SNP rs17336700 of a non-MHC ubiquitin-proteasome subunit PSMD7 is significantly associated with ankylosing spondylitis in Chinese population and the mRNA level of the PSMD7 gene in liver tissue increased when the rs17336700 C allele was present. (PMID:20643764)
- Deubiquitinase PSMD7 promotes the proliferation, invasion, and cisplatin resistance of gastric cancer cells by stabilizing RAD23B. (PMID:34512150)
- Transcriptional activation of Proteasome 26S non-ATPase subunit 7 by forkhead box P3 participates in gastric cancer cell proliferation and apoptosis. (PMID:35037550)
- Deubiquitinating enzyme PSMD7 promotes bladder cancer development: Involvement of RAB1A stabilization. (PMID:38040402)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | psmd7 | ENSDARG00000102417 |
| mus_musculus | Psmd7 | ENSMUSG00000039067 |
| rattus_norvegicus | Psmd7 | ENSRNOG00000014097 |
| drosophila_melanogaster | Rpn8 | FBGN0002787 |
| caenorhabditis_elegans | rpn-8 | WBGENE00004464 |
Paralogs (2): COPS6 (ENSG00000168090), EIF3F (ENSG00000175390)
Protein
Protein identifiers
26S proteasome non-ATPase regulatory subunit 7 — P51665 (reviewed: P51665)
Alternative names: 26S proteasome regulatory subunit RPN8, 26S proteasome regulatory subunit S12, Mov34 protein homolog, Proteasome subunit p40
All UniProt accessions (4): P51665, H3BNT7, H3BQV2, H3BTM8
UniProt curated annotations — full annotation on UniProt →
Function. Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair.
Subunit / interactions. Component of the 19S proteasome regulatory particle complex. The 26S proteasome consists of a 20S core particle (CP) and two 19S regulatory subunits (RP). The regulatory particle is made of a lid composed of 9 subunits including PSMD7, a base containing 6 ATPases and few additional components. Within the complex, PSMD7 interacts with subunit PSMD4 through their respective MPN domain. Interacts with TRIM5.
Miscellaneous. Does not bind a metal ion.
Similarity. Belongs to the peptidase M67A family.
RefSeq proteins (1): NP_002802* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000555 | JAMM/MPN+_dom | Domain |
| IPR024969 | EIF3F/CSN6-like_C | Domain |
| IPR033858 | MPN_RPN7_8 | Family |
| IPR037518 | MPN | Domain |
Pfam: PF01398, PF13012
UniProt features (33 total): strand 12, helix 7, modified residue 4, sequence conflict 3, turn 3, chain 1, domain 1, region of interest 1, cross-link 1
Structure
Experimental structures (PDB)
120 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2O95 | X-RAY DIFFRACTION | 1.95 |
| 9K53 | ELECTRON MICROSCOPY | 2.5 |
| 8USB | ELECTRON MICROSCOPY | 2.73 |
| 9MBP | ELECTRON MICROSCOPY | 2.75 |
| 9NKG | ELECTRON MICROSCOPY | 2.8 |
| 9E8I | ELECTRON MICROSCOPY | 2.87 |
| 9BV3 | ELECTRON MICROSCOPY | 2.9 |
| 9E8H | ELECTRON MICROSCOPY | 2.9 |
| 9K4J | ELECTRON MICROSCOPY | 2.9 |
| 9NKF | ELECTRON MICROSCOPY | 2.9 |
| 9U3L | ELECTRON MICROSCOPY | 2.91 |
| 9NKI | ELECTRON MICROSCOPY | 2.94 |
| 2O96 | X-RAY DIFFRACTION | 3 |
| 6MSB | ELECTRON MICROSCOPY | 3 |
| 7W37 | ELECTRON MICROSCOPY | 3 |
| 8CVT | ELECTRON MICROSCOPY | 3 |
| 9E8G | ELECTRON MICROSCOPY | 3.01 |
| 9MBQ | ELECTRON MICROSCOPY | 3.08 |
| 7W38 | ELECTRON MICROSCOPY | 3.1 |
| 8USC | ELECTRON MICROSCOPY | 3.1 |
| 9BV1 | ELECTRON MICROSCOPY | 3.1 |
| 9E8O | ELECTRON MICROSCOPY | 3.1 |
| 9K4R | ELECTRON MICROSCOPY | 3.1 |
| 9E8Q | ELECTRON MICROSCOPY | 3.16 |
| 6MSD | ELECTRON MICROSCOPY | 3.2 |
| 6MSK | ELECTRON MICROSCOPY | 3.2 |
| 7W39 | ELECTRON MICROSCOPY | 3.2 |
| 7W3G | ELECTRON MICROSCOPY | 3.2 |
| 7W3H | ELECTRON MICROSCOPY | 3.2 |
| 9K4M | ELECTRON MICROSCOPY | 3.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P51665-F1 | 83.10 | 0.30 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (5): 204, 214, 316, 317, 180
Function
Pathways and Gene Ontology
Reactome pathways
68 pathways
| ID | Pathway |
|---|---|
| R-HSA-1169091 | Activation of NF-kappaB in B cells |
| R-HSA-1234176 | Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha |
| R-HSA-1236974 | ER-Phagosome pathway |
| R-HSA-1236978 | Cross-presentation of soluble exogenous antigens (endosomes) |
| R-HSA-174084 | Autodegradation of Cdh1 by Cdh1:APC/C |
| R-HSA-174113 | SCF-beta-TrCP mediated degradation of Emi1 |
| R-HSA-174154 | APC/C:Cdc20 mediated degradation of Securin |
| R-HSA-174178 | APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 |
| R-HSA-174184 | Cdc20:Phospho-APC/C mediated degradation of Cyclin A |
| R-HSA-180534 | Vpu mediated degradation of CD4 |
| R-HSA-180585 | Vif-mediated degradation of APOBEC3G |
| R-HSA-187577 | SCF(Skp2)-mediated degradation of p27/p21 |
| R-HSA-195253 | Degradation of beta-catenin by the destruction complex |
| R-HSA-202424 | Downstream TCR signaling |
| R-HSA-211733 | Regulation of activated PAK-2p34 by proteasome mediated degradation |
| R-HSA-2467813 | Separation of Sister Chromatids |
| R-HSA-2871837 | FCERI mediated NF-kB activation |
| R-HSA-349425 | Autodegradation of the E3 ubiquitin ligase COP1 |
| R-HSA-350562 | Regulation of ornithine decarboxylase (ODC) |
| R-HSA-382556 | ABC-family protein mediated transport |
| R-HSA-450408 | AUF1 (hnRNP D0) binds and destabilizes mRNA |
| R-HSA-4608870 | Asymmetric localization of PCP proteins |
| R-HSA-4641257 | Degradation of AXIN |
| R-HSA-4641258 | Degradation of DVL |
| R-HSA-5358346 | Hedgehog ligand biogenesis |
| R-HSA-5362768 | Hh mutants are degraded by ERAD |
| R-HSA-5607761 | Dectin-1 mediated noncanonical NF-kB signaling |
| R-HSA-5607764 | CLEC7A (Dectin-1) signaling |
| R-HSA-5610780 | Degradation of GLI1 by the proteasome |
| R-HSA-5610783 | Degradation of GLI2 by the proteasome |
MSigDB gene sets: 360 (showing top):
MORF_MTA1, REACTOME_DNA_REPLICATION, REACTOME_SIGNALING_BY_NOTCH, AP1_01, REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1, REACTOME_INNATE_IMMUNE_SYSTEM, MORF_MBD4, YAGI_AML_WITH_INV_16_TRANSLOCATION, MORF_RAB5A, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOMF_METALLOPEPTIDASE_ACTIVITY, GOBP_RESPONSE_TO_PEPTIDE, REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION, KEGG_PROTEASOME
GO Biological Process (1): proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161)
GO Molecular Function (4): protein homodimerization activity (GO:0042803), protein binding (GO:0005515), peptidase activity (GO:0008233), metallopeptidase activity (GO:0008237)
GO Cellular Component (10): proteasome complex (GO:0000502), extracellular region (GO:0005576), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytosol (GO:0005829), proteasome regulatory particle (GO:0005838), membrane (GO:0016020), secretory granule lumen (GO:0034774), extracellular exosome (GO:0070062), ficolin-1-rich granule lumen (GO:1904813)
Reactome top-level categories
Rollup of top-18 pathways:
| Category | Pathways |
|---|---|
| Antigen processing-Cross presentation | 2 |
| APC/C-mediated degradation of cell cycle proteins | 2 |
| Host Interactions of HIV factors | 2 |
| Downstream signaling events of B Cell Receptor (BCR) | 1 |
| Cellular response to hypoxia | 1 |
| Regulation of APC/C activators between G1/S and early anaphase | 1 |
| APC/C:Cdc20 mediated degradation of mitotic proteins | 1 |
| APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint | 1 |
| Cyclin E associated events during G1/S transition | 1 |
| Cyclin A:Cdk2-associated events at S phase entry | 1 |
| Signaling by WNT | 1 |
| TCR signaling | 1 |
| Regulation of Apoptosis | 1 |
| Mitotic Anaphase | 1 |
| Fc epsilon receptor (FCERI) signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| ubiquitin-dependent protein catabolic process | 1 |
| proteasomal protein catabolic process | 1 |
| identical protein binding | 1 |
| protein dimerization activity | 1 |
| binding | 1 |
| hydrolase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| peptidase activity | 1 |
| intracellular protein-containing complex | 1 |
| endopeptidase complex | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| cytoplasm | 1 |
| proteasome accessory complex | 1 |
| protein-containing complex | 1 |
| secretory granule | 1 |
| cytoplasmic vesicle lumen | 1 |
| extracellular vesicle | 1 |
| intracellular organelle lumen | 1 |
| ficolin-1-rich granule | 1 |
Protein interactions and networks
STRING
3730 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PSMD7 | PSMD14 | O00487 | 999 |
| PSMD7 | PSMD12 | O00232 | 997 |
| PSMD7 | PSMD11 | O00231 | 996 |
| PSMD7 | PSMD3 | O43242 | 996 |
| PSMD7 | PSMD13 | Q9UNM6 | 996 |
| PSMD7 | PSMD6 | Q15008 | 995 |
| PSMD7 | PSMD8 | P48556 | 994 |
| PSMD7 | EIF3D | O15371 | 915 |
| PSMD7 | COPS5 | Q92905 | 911 |
| PSMD7 | PSMD2 | Q13200 | 906 |
| PSMD7 | PSMD4 | P55036 | 904 |
| PSMD7 | EIF3H | O15372 | 901 |
| PSMD7 | PSMD1 | Q99460 | 897 |
| PSMD7 | PSMC4 | P43686 | 881 |
| PSMD7 | PSMC1 | P49014 | 879 |
IntAct
213 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PSMC6 | PSMC3 | psi-mi:“MI:0915”(physical association) | 0.950 |
| PSMD14 | PSMD7 | psi-mi:“MI:0915”(physical association) | 0.900 |
| MED4 | MED19 | psi-mi:“MI:2364”(proximity) | 0.900 |
| STK24 | STRN | psi-mi:“MI:0914”(association) | 0.870 |
| UCHL5 | PSMD11 | psi-mi:“MI:0914”(association) | 0.840 |
| PSMD10 | PSMD11 | psi-mi:“MI:0914”(association) | 0.800 |
| MED23 | MED19 | psi-mi:“MI:2364”(proximity) | 0.770 |
| PSMD7 | PSMD11 | psi-mi:“MI:0914”(association) | 0.730 |
| PSMC5 | PSMD11 | psi-mi:“MI:0914”(association) | 0.730 |
| PSMD11 | PSMD12 | psi-mi:“MI:0915”(physical association) | 0.730 |
| PSMB2 | PSMD11 | psi-mi:“MI:0914”(association) | 0.730 |
| PSMD2 | PSMD11 | psi-mi:“MI:0914”(association) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| HTT | PSMD7 | psi-mi:“MI:0915”(physical association) | 0.670 |
BioGRID (610): PSMD7 (Affinity Capture-MS), PSMD14 (Two-hybrid), PSMD7 (Affinity Capture-MS), PSMD7 (Affinity Capture-MS), PSMD7 (Affinity Capture-MS), PSMD1 (Affinity Capture-MS), PSMD13 (Affinity Capture-MS), VPS53 (Affinity Capture-MS), KTN1 (Affinity Capture-MS), RNF20 (Affinity Capture-MS), USP15 (Affinity Capture-MS), PSMD3 (Affinity Capture-MS), PSMD11 (Affinity Capture-MS), PSMC4 (Affinity Capture-MS), PSMC1 (Affinity Capture-MS)
ESM2 similar proteins: A1Z6K7, A3QVV1, A8WVY9, A9V3P1, B0X2G0, B3M123, B3MJ61, B3MP94, B3N4F1, B3NB67, B3P239, B4GDU3, B4HBD2, B4I1C2, B4I3S1, B4II46, B4J9U3, B4JAS7, B4JGX4, B4KBI4, B4KGS4, B4KSC0, B4LTW0, B4LZ60, B4MDZ0, B4MR33, B4N116, B4NJR8, B4NYU1, B4P3T9, B4PUG5, B4QD77, B4QVL3, B5DJJ2, B5E1N0, O01974, O24412, O74440, P26270, P26516
Diamond homologs: A1CQH7, A1Z6K7, A2QQ10, A3QVV1, A5A6I3, A8PZS4, B0X2G0, B3M123, B3MJ61, B3NB67, B3P239, B4GDU3, B4HBD2, B4I3S1, B4II46, B4J9U3, B4JGX4, B4KBI4, B4KSC0, B4LZ60, B4MDZ0, B4MR33, B4NJR8, B4NYU1, B4PUG5, B4QD77, B4QVL3, B5E1N0, O00303, O04202, O24412, P0CO84, P0CO85, P26270, P26516, P51665, Q1DRC9, Q1HR47, Q295I4, Q3ZBD0
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PSMD7 | “form complex” | “26S Proteasome” | binding |
| UBE3A | “down-regulates quantity by destabilization” | PSMD7 | ubiquitination |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 165 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Autodegradation of the E3 ubiquitin ligase COP1 | 21 | 50.2× | 2e-29 |
| Regulation of activated PAK-2p34 by proteasome mediated degradation | 20 | 50.2× | 2e-28 |
| Regulation of ornithine decarboxylase (ODC) | 20 | 49.0× | 3e-28 |
| Cross-presentation of soluble exogenous antigens (endosomes) | 21 | 48.0× | 4e-29 |
| Vpu mediated degradation of CD4 | 20 | 47.9× | 4e-28 |
| Ubiquitin-dependent degradation of Cyclin D | 20 | 47.9× | 4e-28 |
| Proteasome assembly | 26 | 47.8× | 6e-36 |
| Hh mutants are degraded by ERAD | 21 | 46.0× | 1e-28 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| proteasome-mediated ubiquitin-dependent protein catabolic process | 27 | 9.8× | 2e-16 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
46 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 35 |
| Likely benign | 1 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1224 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:74300112:CA:C | acceptor_loss | 1.0000 |
| 16:74300113:A:AC | acceptor_loss | 1.0000 |
| 16:74300113:A:AG | acceptor_gain | 1.0000 |
| 16:74300114:G:GC | acceptor_gain | 1.0000 |
| 16:74300114:GA:G | acceptor_gain | 1.0000 |
| 16:74300114:GAATC:G | acceptor_gain | 1.0000 |
| 16:74300202:TGCAG:T | donor_loss | 1.0000 |
| 16:74300204:CAG:C | donor_loss | 1.0000 |
| 16:74300205:AGG:A | donor_loss | 1.0000 |
| 16:74300208:T:A | donor_loss | 1.0000 |
| 16:74301049:TAG:T | acceptor_loss | 1.0000 |
| 16:74301050:A:AG | acceptor_gain | 1.0000 |
| 16:74301051:G:GA | acceptor_gain | 1.0000 |
| 16:74301051:GTT:G | acceptor_gain | 1.0000 |
| 16:74301051:GTTC:G | acceptor_gain | 1.0000 |
| 16:74301051:GTTCC:G | acceptor_gain | 1.0000 |
| 16:74301553:A:AC | acceptor_loss | 1.0000 |
| 16:74301553:A:AG | acceptor_gain | 1.0000 |
| 16:74301554:G:GG | acceptor_gain | 1.0000 |
| 16:74301554:GCC:G | acceptor_gain | 1.0000 |
| 16:74301554:GCCA:G | acceptor_gain | 1.0000 |
| 16:74301653:G:GG | donor_gain | 1.0000 |
| 16:74302206:T:TA | acceptor_gain | 1.0000 |
| 16:74302207:GCCA:G | acceptor_loss | 1.0000 |
| 16:74302208:CCAG:C | acceptor_loss | 1.0000 |
| 16:74302209:CA:C | acceptor_loss | 1.0000 |
| 16:74302211:GGT:G | acceptor_gain | 1.0000 |
| 16:74302288:ATGAT:A | donor_gain | 1.0000 |
| 16:74302289:TGAT:T | donor_gain | 1.0000 |
| 16:74302290:GAT:G | donor_gain | 1.0000 |
AlphaMissense
2153 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 16:74296946:T:A | V11D | 1.000 |
| 16:74296948:C:G | H12D | 1.000 |
| 16:74296952:C:A | P13H | 1.000 |
| 16:74296955:T:C | L14P | 1.000 |
| 16:74296957:G:A | V15M | 1.000 |
| 16:74296961:T:C | L16P | 1.000 |
| 16:74296964:T:A | L17H | 1.000 |
| 16:74296964:T:C | L17P | 1.000 |
| 16:74296966:A:C | S18R | 1.000 |
| 16:74296968:T:A | S18R | 1.000 |
| 16:74296968:T:G | S18R | 1.000 |
| 16:74296975:G:C | D21H | 1.000 |
| 16:74296976:A:C | D21A | 1.000 |
| 16:74296976:A:T | D21V | 1.000 |
| 16:74296988:G:C | R25P | 1.000 |
| 16:74300147:T:A | V36D | 1.000 |
| 16:74300149:G:C | G37R | 1.000 |
| 16:74300149:G:T | G37C | 1.000 |
| 16:74300150:G:A | G37D | 1.000 |
| 16:74300150:G:T | G37V | 1.000 |
| 16:74300156:T:A | L39H | 1.000 |
| 16:74300156:T:C | L39P | 1.000 |
| 16:74300161:G:A | G41R | 1.000 |
| 16:74300161:G:C | G41R | 1.000 |
| 16:74300161:G:T | G41W | 1.000 |
| 16:74300162:G:A | G41E | 1.000 |
| 16:74300162:G:T | G41V | 1.000 |
| 16:74300189:T:A | V50E | 1.000 |
| 16:74300197:A:C | S53R | 1.000 |
| 16:74300199:T:A | S53R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000120332 (16:74297248 GAGTTCGTTTTGCCGA>G), RS1000126706 (16:74296510 CG>C), RS1000348428 (16:74298396 G>A), RS1000684672 (16:74297108 T>C), RS1000912779 (16:74303091 G>A,C,T), RS1001188425 (16:74302140 G>A), RS1001199841 (16:74302414 T>A,C), RS1002044660 (16:74306390 T>G), RS1002390313 (16:74296474 G>A,T), RS1002505065 (16:74306641 A>G), RS1002743741 (16:74295038 G>A), RS1003080114 (16:74306283 T>G), RS1003131195 (16:74306543 G>T), RS1003287591 (16:74299227 C>T), RS1003508173 (16:74303418 C>A,T)
Disease associations
OMIM: gene MIM:157970 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003992_14 | Photic sneeze reflex | 4.000000e-09 |
| GCST008757_5 | Alcohol consumption | 1.000000e-14 |
| GCST008811_5 | Alcohol consumption (drinks per week) | 2.000000e-10 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007887 | autosomal dominant compelling helio-ophthalmic outburst syndrome |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2364701 (PROTEIN COMPLEX), CHEMBL3831214 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
2 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 25,628 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL325041 | BORTEZOMIB | 4 | 13,120 |
| CHEMBL451887 | CARFILZOMIB | 4 | 12,508 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
66 potent at pChembl≥5 of 67 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.62 | IC50 | 2.4 | nM | BORTEZOMIB |
| 8.59 | IC50 | 2.56 | nM | BORTEZOMIB |
| 8.57 | IC50 | 2.7 | nM | CHEMBL3237863 |
| 8.47 | IC50 | 3.4 | nM | CHEMBL6143686 |
| 8.41 | IC50 | 3.9 | nM | CHEMBL3237862 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237864 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237867 |
| 8.32 | IC50 | 4.8 | nM | CHEMBL3237873 |
| 8.29 | IC50 | 5.1 | nM | CHEMBL3237865 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237866 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237860 |
| 8.23 | IC50 | 5.9 | nM | CHEMBL3237868 |
| 8.15 | IC50 | 7 | nM | BORTEZOMIB |
| 8.15 | IC50 | 7.1 | nM | CHEMBL3237870 |
| 8.15 | IC50 | 7.14 | nM | BORTEZOMIB |
| 8.12 | IC50 | 7.5 | nM | CHEMBL3237871 |
| 8.11 | IC50 | 7.7 | nM | CHEMBL3237874 |
| 8.11 | IC50 | 7.8 | nM | CHEMBL3237869 |
| 8.07 | IC50 | 8.6 | nM | CARFILZOMIB |
| 7.54 | IC50 | 29 | nM | CHEMBL3237861 |
| 7.34 | IC50 | 46 | nM | CHEMBL3237867 |
| 7.27 | IC50 | 54 | nM | CHEMBL3237872 |
| 7.15 | Kd | 71.11 | nM | CHEMBL5653589 |
| 7.15 | ED50 | 71.11 | nM | CHEMBL5653589 |
| 7.12 | IC50 | 75 | nM | CHEMBL3237865 |
| 7.12 | IC50 | 76 | nM | CHEMBL3237866 |
| 6.96 | IC50 | 110 | nM | CHEMBL3262766 |
| 6.92 | IC50 | 120 | nM | CHEMBL3237864 |
| 6.92 | IC50 | 120 | nM | BORTEZOMIB |
| 6.89 | IC50 | 130 | nM | CHEMBL3237869 |
| 6.85 | IC50 | 140 | nM | CHEMBL3237862 |
| 6.82 | IC50 | 150 | nM | CHEMBL3237863 |
| 6.77 | IC50 | 170 | nM | CHEMBL3237873 |
| 6.77 | IC50 | 170 | nM | CHEMBL3262765 |
| 6.72 | IC50 | 190 | nM | CHEMBL3262758 |
| 6.68 | IC50 | 210 | nM | CHEMBL3237870 |
| 6.66 | IC50 | 220 | nM | CHEMBL3262756 |
| 6.60 | IC50 | 250 | nM | CHEMBL3237868 |
| 6.47 | IC50 | 340 | nM | CHEMBL3262752 |
| 6.47 | IC50 | 340 | nM | CHEMBL3262755 |
| 6.44 | IC50 | 360 | nM | CHEMBL3262757 |
| 6.42 | IC50 | 380 | nM | CHEMBL3262754 |
| 6.36 | IC50 | 440 | nM | CHEMBL3262753 |
| 6.30 | IC50 | 500 | nM | CHEMBL3237872 |
| 6.20 | IC50 | 630 | nM | CHEMBL3262762 |
| 6.02 | IC50 | 950 | nM | CHEMBL3262761 |
| 6.00 | IC50 | 1000 | nM | CHEMBL3237871 |
| 5.96 | IC50 | 1100 | nM | CHEMBL3237862 |
| 5.85 | IC50 | 1400 | nM | BELACTOSIN A |
| 5.84 | IC50 | 1440 | nM | BELACTOSIN A |
PubChem BioAssay actives
62 with measured affinity, of 137 total; 34 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| Bortezomib | 1985684: Inhibition of 26S proteasome (unknown origin) | ic50 | 0.0024 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0027 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0039 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-(4-phenylmethoxybutyl)butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0048 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0051 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| benzyl N-[(2S)-1-[[(2R)-1-[(1R,2S)-2-[[(2R,3S)-3-[(2S)-butan-2-yl]-4-oxooxetane-2-carbonyl]amino]cyclopropyl]-4-phenylbutan-2-yl]amino]-1-oxopropan-2-yl]carbamate | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| (2S)-2-[(2,5-dichlorobenzoyl)amino]-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0059 | uM |
| (2S)-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]-2-(pyrazine-2-carbonylamino)butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0071 | uM |
| (2S)-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]-2-[(6-phenylpyridine-2-carbonyl)amino]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0075 | uM |
| [(1R)-1-[[(2S)-2-acetamido-4-oxo-4-[[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]amino]butanoyl]amino]-3-methylbutyl]boronic acid | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0077 | uM |
| (2S)-2-benzamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0078 | uM |
| Carfilzomib | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.0086 | uM |
| (2R,3S)-3-[(2S)-butan-2-yl]-4-oxo-N-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]oxetane-2-carboxamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0290 | uM |
| (2S)-2-acetamido-N’-methyl-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0540 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149130: Binding affinity to human PSMD7 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0711 | uM |
| N-[(1R)-3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]naphthalene-2-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.1100 | uM |
| N-[(1R)-3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]-4-(trifluoromethyl)benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.1700 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]naphthalene-2-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.1900 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]-4-(trifluoromethyl)benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.2200 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]pyridine-3-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3400 | uM |
| 4-methoxy-N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3400 | uM |
| 4-cyano-N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3600 | uM |
| 4-fluoro-N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3800 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.4400 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]oxane-4-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.6300 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]thiophene-2-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.9500 | uM |
| (2S)-2-[[(2S)-2-aminopropanoyl]amino]-3-[(1S,2S)-2-[[(2R,3S)-3-[(2S)-butan-2-yl]-4-oxooxetane-2-carbonyl]amino]cyclopropyl]propanoic acid | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 1.4000 | uM |
| (2S)-2-acetamido-N-[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1152964: Inhibition of chymotrypsin-like of human 20S proteasome using chromophoric Suc-LLVY-AMC as substrate after 60 mins by fluorescence assay | ic50 | 2.3000 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149130: Binding affinity to human PSMD7 incubated for 45 mins by Kinobead based pull down assay | kd | 4.1237 | uM |
| N-[3-(2-oxo-1,3,4-oxathiazol-5-yl)phenyl]acetamide | 1137840: Inhibition of chymotrypsin-like activity of 26S proteasome in intact human Karpas 1106p cells assessed as substrate hydrolysis using Suc-LLVY-(D)-aminoluciferin as substrate after 3 hrs by cell-based Proteasome-Glo assay | ec50 | 4.2000 | uM |
| (2S)-2-acetamido-N-[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]-N’-(4-phenylmethoxybutyl)butanediamide | 1152964: Inhibition of chymotrypsin-like of human 20S proteasome using chromophoric Suc-LLVY-AMC as substrate after 60 mins by fluorescence assay | ic50 | 5.7000 | uM |
CTD chemical–gene interactions
57 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects expression, decreases expression, increases expression | 3 |
| Valproic Acid | increases expression, affects expression | 3 |
| bisphenol F | affects cotreatment, increases expression | 2 |
| sodium arsenite | increases abundance, increases expression, decreases expression | 2 |
| Arsenic Trioxide | affects binding, decreases reaction, increases expression | 2 |
| Air Pollutants | affects cotreatment, increases abundance, increases expression, decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tobacco Smoke Pollution | increases expression | 2 |
| Cyclosporine | increases expression, decreases expression | 2 |
| dicrotophos | decreases expression | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| alpha-pinene | affects cotreatment, increases expression, increases abundance | 1 |
| nobiletin | decreases expression, decreases reaction | 1 |
| sodium arsenate | decreases expression, decreases reaction | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, decreases expression | 1 |
| trichostatin A | affects expression | 1 |
| beta-lapachone | increases expression | 1 |
| 4-aminophenylarsenoxide | affects binding, decreases reaction | 1 |
| quinoline | increases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases expression, increases abundance | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| torcetrapib | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| bisphenol S | increases expression | 1 |
ChEMBL screening assays
27 unique, capped per target: 27 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3222879 | Binding | Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition measured after 90 mins by fluorescence assay | Oxathiazole-2-one derivative of bortezomib: Synthesis, stability and proteasome inhibition activity — Medchemcomm |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.