PSMG4
gene geneOn this page
Also known as PAC4
Summary
PSMG4 (proteasome assembly chaperone 4, HGNC:21108) is a protein-coding gene on chromosome 6p25.2, encoding Proteasome assembly chaperone 4 (Q5JS54). Chaperone protein which promotes assembly of the 20S proteasome. It is a common-essential gene (DepMap: required in 98.7% of cancer cell lines).
Predicted to be involved in proteasome assembly. Predicted to be located in cytosol. Predicted to be part of protein-containing complex.
Source: NCBI Gene 389362 — RefSeq curated summary.
At a glance
- GWAS associations: 34
- Clinical variants (ClinVar): 25 total
- Cancer dependency (DepMap): dependent in 98.7% of screened cell lines (common-essential)
- MANE Select transcript:
NM_001128591
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:21108 |
| Approved symbol | PSMG4 |
| Name | proteasome assembly chaperone 4 |
| Location | 6p25.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | PAC4 |
| Ensembl gene | ENSG00000180822 |
| Ensembl biotype | protein_coding |
| OMIM | 617550 |
| Entrez | 389362 |
Gene structure
Transcript identifiers
Ensembl transcripts: 13 — 10 protein_coding, 2 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000324987, ENST00000380305, ENST00000380306, ENST00000416079, ENST00000419065, ENST00000438998, ENST00000451246, ENST00000454610, ENST00000473000, ENST00000509933, ENST00000884818, ENST00000932962, ENST00000932963
RefSeq mRNA: 3 — MANE Select: NM_001128591
NM_001128591, NM_001128592, NM_001135750
CCDS: CCDS47360, CCDS47361, CCDS47362
Canonical transcript exons
ENST00000438998 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001989665 | 3263684 | 3263759 |
| ENSE00002059344 | 3267591 | 3268049 |
| ENSE00002066764 | 3258947 | 3259196 |
Expression profiles
Bgee: expression breadth ubiquitous, 253 present calls, max score 95.36.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 19.7065 / max 160.7488, expressed in 1806 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 65528 | 18.8148 | 1802 |
| 65527 | 0.8917 | 640 |
Top tissues by expression
254 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| oocyte | CL:0000023 | 95.36 | gold quality |
| parotid gland | UBERON:0001831 | 94.19 | gold quality |
| saphenous vein | UBERON:0007318 | 93.51 | gold quality |
| body of tongue | UBERON:0011876 | 92.99 | gold quality |
| vastus lateralis | UBERON:0001379 | 92.90 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 92.75 | gold quality |
| synovial joint | UBERON:0002217 | 92.71 | gold quality |
| gingival epithelium | UBERON:0001949 | 92.67 | gold quality |
| tongue | UBERON:0001723 | 92.60 | gold quality |
| quadriceps femoris | UBERON:0001377 | 92.59 | gold quality |
| superior surface of tongue | UBERON:0007371 | 92.40 | gold quality |
| corpus epididymis | UBERON:0004359 | 92.33 | gold quality |
| upper arm skin | UBERON:0004263 | 92.19 | gold quality |
| oviduct epithelium | UBERON:0004804 | 91.86 | gold quality |
| penis | UBERON:0000989 | 91.80 | gold quality |
| trachea | UBERON:0003126 | 91.73 | gold quality |
| pylorus | UBERON:0001166 | 91.59 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 91.33 | gold quality |
| layer of synovial tissue | UBERON:0007616 | 91.33 | gold quality |
| biceps brachii | UBERON:0001507 | 91.30 | gold quality |
| nucleus accumbens | UBERON:0001882 | 91.19 | gold quality |
| pericardium | UBERON:0002407 | 91.18 | gold quality |
| calcaneal tendon | UBERON:0003701 | 91.18 | gold quality |
| cardia of stomach | UBERON:0001162 | 91.17 | gold quality |
| gingiva | UBERON:0001828 | 91.11 | gold quality |
| body of pancreas | UBERON:0001150 | 91.00 | gold quality |
| nipple | UBERON:0002030 | 90.94 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 90.90 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 90.77 | gold quality |
| pons | UBERON:0000988 | 90.71 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 7.50 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
22 targeting PSMG4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-LET-7C-3P | 99.95 | 73.42 | 2862 |
| HSA-LET-7A-2-3P | 99.87 | 70.53 | 1921 |
| HSA-LET-7G-3P | 99.85 | 70.43 | 1929 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-4422 | 99.72 | 72.07 | 2908 |
| HSA-MIR-4729 | 99.69 | 72.18 | 4233 |
| HSA-MIR-4762-5P | 99.57 | 68.54 | 1424 |
| HSA-MIR-642A-5P | 99.51 | 65.10 | 1152 |
| HSA-MIR-5571-5P | 99.49 | 66.99 | 1764 |
| HSA-MIR-3915 | 99.45 | 68.49 | 1905 |
| HSA-MIR-499A-3P | 99.18 | 69.20 | 1392 |
| HSA-MIR-499B-3P | 99.18 | 69.27 | 1391 |
| HSA-MIR-4744 | 99.01 | 69.91 | 1581 |
| HSA-MIR-6770-5P | 98.97 | 66.76 | 1853 |
| HSA-MIR-6769B-5P | 98.73 | 64.91 | 1092 |
| HSA-MIR-4733-3P | 98.35 | 65.20 | 994 |
| HSA-MIR-6769A-5P | 97.99 | 64.16 | 851 |
| HSA-MIR-4509 | 96.19 | 65.80 | 900 |
| HSA-MIR-6823-3P | 95.45 | 66.14 | 704 |
| HSA-MIR-1234-3P | 86.70 | 58.45 | 109 |
| HSA-MIR-7107-5P | 86.70 | 59.28 | 110 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 98.7% of screened cell lines, common-essential.
Literature-anchored findings (GeneRIF, showing 2)
- a crystal structure of human PAC4 at 1.90-A resolution. Crystallographic data identify a hydrophobic surface that is surrounded by charged residues. The hydrophobic surface is complementary to that of its binding partner, PAC3. (PMID:28263418)
- PSMG4 and NLRP5 appear of particular interest as they were found to be associated with more than one clinical phenotype and are implicated in biological processes considered relevant to the pathophysiology of MS. Also, PSMG4 p.W99R and NLRP5 p.R761L were found to correlate with an earlier age of MS clinical onset. Our data suggests PSMG4 and NLPR5 as potential targets for the development of modifying therapies for MS. (PMID:28501589)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Psmg4 | ENSMUSG00000071451 |
| rattus_norvegicus | Psmg4 | ENSRNOG00000039265 |
| rattus_norvegicus | ENSRNOG00000079347 |
Protein
Protein identifiers
Proteasome assembly chaperone 4 — Q5JS54 (reviewed: Q5JS54)
Alternative names: Proteasome chaperone homolog 4
All UniProt accessions (7): Q5JS54, D6R926, D6RB92, D6REN3, E2QRC7, F2Z3E0, H7C465
UniProt curated annotations — full annotation on UniProt →
Function. Chaperone protein which promotes assembly of the 20S proteasome.
Subunit / interactions. Interacts with PSMG3. Associates with alpha subunits of the 20S proteasome.
Similarity. Belongs to the PSMG4 family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q5JS54-1 | 1 | yes |
| Q5JS54-2 | 2 | |
| Q5JS54-3 | 3 |
RefSeq proteins (3): NP_001122063, NP_001122064, NP_001129222 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR032157 | PAC4 | Family |
Pfam: PF16093
UniProt features (15 total): strand 7, helix 3, splice variant 2, chain 1, sequence variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
3 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5WTQ | X-RAY DIFFRACTION | 1.9 |
| 8QYJ | ELECTRON MICROSCOPY | 2.73 |
| 8TM3 | ELECTRON MICROSCOPY | 3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q5JS54-F1 | 87.78 | 0.60 |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-9907900 | Proteasome assembly |
MSigDB gene sets: 78 (showing top):
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, GOBP_PROTEASOME_ASSEMBLY, chr6p25, YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13, BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_UP, REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION, KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN, RATTENBACHER_BOUND_BY_CELF1, GOCC_PROTEIN_FOLDING_CHAPERONE_COMPLEX, GOMF_PROTEIN_CONTAINING_COMPLEX_BINDING, CREB3L4_TARGET_GENES, FOXG1_TARGET_GENES, HOXA10_TARGET_GENES, SALL4_TARGET_GENES
GO Biological Process (1): proteasome assembly (GO:0043248)
GO Molecular Function (1): protein-containing complex binding (GO:0044877)
GO Cellular Component (2): cytosol (GO:0005829), protein-containing complex (GO:0032991)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Post-translational protein modification | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| protein-containing complex assembly | 1 |
| binding | 1 |
| cytoplasm | 1 |
| cellular anatomical structure | 1 |
| cellular_component | 1 |
Protein interactions and networks
STRING
472 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PSMG4 | PSMG3 | Q9BT73 | 997 |
| PSMG4 | POMP | Q9Y244 | 787 |
| PSMG4 | PSMG2 | Q969U7 | 661 |
| PSMG4 | PAAF1 | Q9BRP4 | 581 |
| PSMG4 | PSMG1 | O95456 | 548 |
| PSMG4 | PSMD4 | P55036 | 546 |
| PSMG4 | PSME4 | Q14997 | 541 |
| PSMG4 | PSMF1 | Q92530 | 540 |
| PSMG4 | PSMD9 | O00233 | 488 |
| PSMG4 | ECPAS | Q5VYK3 | 477 |
| PSMG4 | SLC13A4 | Q9UKG4 | 471 |
| PSMG4 | PSMB10 | P40306 | 455 |
| PSMG4 | ANAPC15 | P60006 | 437 |
| PSMG4 | ADRM1 | Q16186 | 431 |
| PSMG4 | PSMD12 | O00232 | 420 |
IntAct
81 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PSMA1 | PSMA7 | psi-mi:“MI:0914”(association) | 0.950 |
| PSMA2 | PSMA7 | psi-mi:“MI:0914”(association) | 0.850 |
| PSMG2 | PSMG1 | psi-mi:“MI:0914”(association) | 0.850 |
| PSMA5 | PSMA7 | psi-mi:“MI:0914”(association) | 0.800 |
| PSMB7 | PSMA7 | psi-mi:“MI:0914”(association) | 0.790 |
| POMP | PSMA7 | psi-mi:“MI:0915”(physical association) | 0.720 |
| IMP3 | MPHOSPH10 | psi-mi:“MI:0914”(association) | 0.670 |
| PSMB3 | PSMD11 | psi-mi:“MI:0914”(association) | 0.640 |
| CA10 | WDHD1 | psi-mi:“MI:0914”(association) | 0.640 |
| PSMB7 | PSMD11 | psi-mi:“MI:0914”(association) | 0.640 |
| PSMB9 | PSMD11 | psi-mi:“MI:0914”(association) | 0.530 |
| ZMAT5 | DENND4B | psi-mi:“MI:0914”(association) | 0.530 |
| DCDC2B | HSPA8 | psi-mi:“MI:0914”(association) | 0.530 |
| FOXD4 | PDHX | psi-mi:“MI:0914”(association) | 0.530 |
| AVPI1 | UNC119B | psi-mi:“MI:0914”(association) | 0.530 |
| PSMG2 | PSMA7 | psi-mi:“MI:0914”(association) | 0.530 |
| MRPS34 | ZZEF1 | psi-mi:“MI:0914”(association) | 0.530 |
| PSMA7 | PSMG1 | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (83): PSMG4 (Affinity Capture-MS), PSMG4 (Affinity Capture-MS), PSMG4 (Affinity Capture-MS), PSMG4 (Affinity Capture-MS), PSMG4 (Co-fractionation), PSMG4 (Co-fractionation), PSMG4 (Co-fractionation), PSMG4 (Co-fractionation), PSMG4 (Co-fractionation), PSMG4 (Co-fractionation), PSMG4 (Co-fractionation), PSMG4 (Co-fractionation), PSMG4 (Affinity Capture-MS), PSMG4 (Affinity Capture-MS), PSMG4 (Affinity Capture-MS)
ESM2 similar proteins: A2YPT7, A3KPF2, A3KPP3, A7SKJ3, A7TTC4, O01757, O75002, O95163, P40123, P47123, P47758, P52481, P53738, Q09454, Q14AI0, Q2TAQ1, Q32PE2, Q3SYG4, Q4FZX7, Q501D5, Q54ML6, Q5JS54, Q5R5X8, Q5YLB4, Q66I84, Q6AX60, Q6C619, Q6GL75, Q6GMB0, Q6PD82, Q74ZJ1, Q7TT37, Q7XI75, Q811G0, Q84W92, Q8LPK4, Q8LPL6, Q8VHU4, Q8WND5, Q8X0S4
Diamond homologs: P0C7N9, P0C8Z5, Q5JS54
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 79 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Antigen processing: Ub, ATP-independent proteasomal degradation | 8 | 93.2× | 5e-13 |
| Proteasome assembly | 14 | 58.3× | 1e-19 |
| Cross-presentation of soluble exogenous antigens (endosomes) | 10 | 51.8× | 2e-13 |
| Regulation of activated PAK-2p34 by proteasome mediated degradation | 9 | 51.2× | 3e-12 |
| AUF1 (hnRNP D0) binds and destabilizes mRNA | 10 | 50.7× | 2e-13 |
| Regulation of ornithine decarboxylase (ODC) | 9 | 49.9× | 3e-12 |
| Vpu mediated degradation of CD4 | 9 | 48.8× | 3e-12 |
| Autodegradation of the E3 ubiquitin ligase COP1 | 9 | 48.8× | 3e-12 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| proteasome-mediated ubiquitin-dependent protein catabolic process | 12 | 8.8× | 3e-06 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
25 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 19 |
| Likely benign | 3 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1596 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 6:3259192:GCTAC:G | donor_gain | 1.0000 |
| 6:3259193:C:G | donor_gain | 1.0000 |
| 6:3259197:G:GG | donor_gain | 1.0000 |
| 6:3283971:CATCC:C | acceptor_gain | 1.0000 |
| 6:3283973:TCC:T | acceptor_gain | 1.0000 |
| 6:3283974:CCC:C | acceptor_gain | 1.0000 |
| 6:3283975:CCT:C | acceptor_loss | 1.0000 |
| 6:3283976:C:CC | acceptor_gain | 1.0000 |
| 6:3283976:CT:C | acceptor_loss | 1.0000 |
| 6:3285152:C:CT | acceptor_gain | 1.0000 |
| 6:3285152:C:T | acceptor_gain | 1.0000 |
| 6:3285153:A:T | acceptor_gain | 1.0000 |
| 6:3285156:C:CT | acceptor_gain | 1.0000 |
| 6:3285157:A:T | acceptor_gain | 1.0000 |
| 6:3285160:C:CT | acceptor_gain | 1.0000 |
| 6:3285161:G:T | acceptor_gain | 1.0000 |
| 6:3286857:A:AC | donor_gain | 1.0000 |
| 6:3286858:C:CC | donor_gain | 1.0000 |
| 6:3289762:A:AC | donor_gain | 1.0000 |
| 6:3289763:C:CC | donor_gain | 1.0000 |
| 6:3289763:CG:C | donor_gain | 1.0000 |
| 6:3289862:CAGCT:C | acceptor_gain | 1.0000 |
| 6:3289865:CT:C | acceptor_gain | 1.0000 |
| 6:3289867:C:CC | acceptor_gain | 1.0000 |
| 6:3298086:CTCA:C | donor_loss | 1.0000 |
| 6:3298087:TCA:T | donor_loss | 1.0000 |
| 6:3298088:CACCT:C | donor_loss | 1.0000 |
| 6:3298090:C:CT | donor_loss | 1.0000 |
| 6:3298217:TC:T | acceptor_gain | 1.0000 |
| 6:3298218:CCT:C | acceptor_gain | 1.0000 |
AlphaMissense
807 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 6:3259071:T:C | F17L | 0.999 |
| 6:3259073:C:A | F17L | 0.999 |
| 6:3259073:C:G | F17L | 0.999 |
| 6:3259104:T:C | F28L | 0.999 |
| 6:3259106:C:A | F28L | 0.999 |
| 6:3259106:C:G | F28L | 0.999 |
| 6:3259140:T:A | W40R | 0.999 |
| 6:3259140:T:C | W40R | 0.999 |
| 6:3259146:G:A | G42R | 0.999 |
| 6:3259146:G:C | G42R | 0.999 |
| 6:3259146:G:T | G42W | 0.999 |
| 6:3259147:G:A | G42E | 0.999 |
| 6:3259180:C:A | A53D | 0.999 |
| 6:3263748:C:A | A80D | 0.999 |
| 6:3267618:T:A | V93D | 0.999 |
| 6:3267620:A:C | S94R | 0.999 |
| 6:3267622:C:A | S94R | 0.999 |
| 6:3267622:C:G | S94R | 0.999 |
| 6:3267675:T:A | I112N | 0.999 |
| 6:3267707:T:C | F123L | 0.999 |
| 6:3267708:T:C | F123S | 0.999 |
| 6:3267709:C:A | F123L | 0.999 |
| 6:3267709:C:G | F123L | 0.999 |
| 6:3259105:T:C | F28S | 0.998 |
| 6:3259120:T:C | L33P | 0.998 |
| 6:3259138:T:C | L39P | 0.998 |
| 6:3259142:G:C | W40C | 0.998 |
| 6:3259142:G:T | W40C | 0.998 |
| 6:3259147:G:T | G42V | 0.998 |
| 6:3259171:T:C | L50P | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000024859 (6:3257333 A>G), RS1000035343 (6:3261155 G>A), RS1000115373 (6:3255305 T>A), RS1000263555 (6:3254053 C>A,T), RS1000293049 (6:3253993 C>T), RS1000544705 (6:3257522 A>G), RS1000550946 (6:3255245 T>C), RS1000600851 (6:3254430 T>A,C,G), RS1000636257 (6:3265208 C>T), RS1000789580 (6:3255316 G>A), RS1000946164 (6:3255378 TTTG>T), RS1001027049 (6:3261937 C>A,G,T), RS1001192732 (6:3254465 CTT>C,CT,CTTT), RS1001396333 (6:3262515 C>G,T), RS1001465794 (6:3259164 C>G)
Disease associations
OMIM: gene MIM:617550 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
34 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST010796_4376 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-10 |
| GCST010796_4377 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-10 |
| GCST010796_4378 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-09 |
| GCST010796_4379 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-08 |
| GCST010796_4380 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-08 |
| GCST010796_4423 | Electrocardiogram morphology (amplitude at temporal datapoints) | 7.000000e-13 |
| GCST010796_4424 | Electrocardiogram morphology (amplitude at temporal datapoints) | 7.000000e-11 |
| GCST010796_4425 | Electrocardiogram morphology (amplitude at temporal datapoints) | 7.000000e-10 |
| GCST010796_4451 | Electrocardiogram morphology (amplitude at temporal datapoints) | 5.000000e-09 |
| GCST010796_4452 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-08 |
| GCST010796_4453 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-10 |
| GCST010796_4454 | Electrocardiogram morphology (amplitude at temporal datapoints) | 5.000000e-10 |
| GCST010796_4455 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-09 |
| GCST010796_4456 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-08 |
| GCST010796_4457 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-10 |
| GCST010796_4458 | Electrocardiogram morphology (amplitude at temporal datapoints) | 9.000000e-12 |
| GCST010796_4459 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-10 |
| GCST010796_4460 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-12 |
| GCST010796_4461 | Electrocardiogram morphology (amplitude at temporal datapoints) | 4.000000e-12 |
| GCST010796_4462 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-10 |
| GCST010796_4463 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-10 |
| GCST010796_4464 | Electrocardiogram morphology (amplitude at temporal datapoints) | 4.000000e-11 |
| GCST010796_4465 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-10 |
| GCST010796_4466 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-08 |
| GCST010796_4467 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-09 |
| GCST010796_4468 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-10 |
| GCST010796_4469 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-11 |
| GCST010796_4470 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-11 |
| GCST010796_4471 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-11 |
| GCST010796_4472 | Electrocardiogram morphology (amplitude at temporal datapoints) | 4.000000e-11 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004327 | electrocardiography |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
41 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects expression, increases abundance, decreases expression, affects cotreatment | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tretinoin | decreases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| ginger extract | affects cotreatment, affects expression, increases abundance | 1 |
| sodium arsenite | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| isobutyl alcohol | affects cotreatment, decreases expression, increases abundance | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| Grape Seed Proanthocyanidins | affects cotreatment, increases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| jinfukang | increases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Temozolomide | increases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Air Pollutants | affects expression, increases abundance | 1 |
| Cadmium | increases abundance, increases expression | 1 |
| Catechin | increases expression, affects cotreatment | 1 |
| Dimethyl Sulfoxide | increases expression | 1 |
| Ethyl Methanesulfonate | decreases expression | 1 |
| Formaldehyde | decreases expression | 1 |
| Gasoline | affects cotreatment, decreases expression, increases abundance | 1 |
| Ivermectin | decreases expression | 1 |
| Ketoconazole | increases expression | 1 |
| Methyl Methanesulfonate | decreases expression | 1 |
| Oils, Volatile | affects cotreatment, affects expression, increases abundance | 1 |
| Ozone | affects expression, increases abundance | 1 |
| Polycyclic Aromatic Hydrocarbons | affects cotreatment, decreases expression, increases abundance | 1 |
| Quercetin | decreases expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.