PTPRN2-AS2

Summary

PTPRN2-AS2 (PTPRN2 antisense RNA 2, HGNC:40489) is a long non-coding RNA gene on chromosome 7q36.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40489
Approved symbol	PTPRN2-AS2
Name	PTPRN2 antisense RNA 2
Location	7q36.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231980
Ensembl biotype	lncRNA
Entrez	141445968

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000436489

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000436489 — 2 exons

Exon	Start	End
ENSE00001591938	158027373	158027476
ENSE00001601101	158027633	158031128

Expression profiles

Bgee: expression breadth broad, 19 present calls, max score 63.94.

Top tissues by expression

19 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
olfactory segment of nasal mucosa	UBERON:0005386	63.94	gold quality
pancreas	UBERON:0001264	49.24	gold quality
islet of Langerhans	UBERON:0000006	48.46	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	46.86	silver quality
blood	UBERON:0000178	46.39	silver quality
prostate gland	UBERON:0002367	45.72	silver quality
primary visual cortex	UBERON:0002436	44.71	silver quality
fallopian tube	UBERON:0003889	44.04	gold quality
stomach	UBERON:0000945	43.91	silver quality
lung	UBERON:0002048	43.21	silver quality
brain	UBERON:0000955	43.10	silver quality
putamen	UBERON:0001874	41.13	silver quality
body of stomach	UBERON:0001161	40.41	silver quality
Brodmann (1909) area 9	UBERON:0013540	40.08	silver quality
upper lobe of left lung	UBERON:0008952	38.74	silver quality
caudate nucleus	UBERON:0001873	36.91	silver quality
nucleus accumbens	UBERON:0001882	36.65	silver quality
Ammon’s horn	UBERON:0001954	35.36	silver quality
hypothalamus	UBERON:0001898	34.75	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.69

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.