PTPRN2-AS3

Summary

PTPRN2-AS3 (PTPRN2 antisense RNA 3, HGNC:40490) is a long non-coding RNA gene on chromosome 7q36.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40490
Approved symbol	PTPRN2-AS3
Name	PTPRN2 antisense RNA 3
Location	7q36.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225365
Ensembl biotype	lncRNA
Entrez	141369868

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000448698

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000448698 — 2 exons

Exon	Start	End
ENSE00001781392	158537495	158537614
ENSE00001791479	158539411	158539879

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 65.16.

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	65.16	gold quality
sural nerve	UBERON:0015488	62.68	gold quality
gall bladder	UBERON:0002110	62.46	gold quality
right lobe of liver	UBERON:0001114	62.38	gold quality
urinary bladder	UBERON:0001255	61.24	gold quality
cortical plate	UBERON:0005343	59.85	gold quality
liver	UBERON:0002107	58.36	gold quality
lymph node	UBERON:0000029	57.08	gold quality
spleen	UBERON:0002106	56.77	gold quality
islet of Langerhans	UBERON:0000006	54.51	gold quality
monocyte	CL:0000576	54.30	silver quality
muscle layer of sigmoid colon	UBERON:0035805	53.66	gold quality
blood	UBERON:0000178	53.31	gold quality
placenta	UBERON:0001987	52.36	gold quality
vermiform appendix	UBERON:0001154	52.29	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	52.03	gold quality
pituitary gland	UBERON:0000007	51.75	gold quality
bone marrow	UBERON:0002371	51.19	silver quality
primary visual cortex	UBERON:0002436	50.32	silver quality
colon	UBERON:0001155	50.00	gold quality
stomach	UBERON:0000945	49.83	gold quality
adenohypophysis	UBERON:0002196	49.34	gold quality
pancreas	UBERON:0001264	48.72	gold quality
intestine	UBERON:0000160	48.52	gold quality
mucosa of transverse colon	UBERON:0004991	48.44	gold quality
superior frontal gyrus	UBERON:0002661	48.33	silver quality
lung	UBERON:0002048	48.32	gold quality
body of uterus	UBERON:0009853	48.27	gold quality
omental fat pad	UBERON:0010414	48.04	gold quality
myometrium	UBERON:0001296	47.99	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.32

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.