PYCR1-AS1

Summary

PYCR1-AS1 (PYCR1 antisense RNA 1, HGNC:56889) is a long non-coding RNA gene on chromosome 17q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56889
Approved symbol	PYCR1-AS1
Name	PYCR1 antisense RNA 1
Location	17q25.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-498C9.13
Ensembl gene	ENSG00000263585
Ensembl biotype	lncRNA
Entrez	132069525
RNAcentral	URS0000154D67 — lncRNA, 450 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000583521

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000583521 — 2 exons

Exon	Start	End
ENSE00002689046	81932398	81932784
ENSE00002719614	81932996	81933058

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 86.90.

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stromal cell of endometrium	CL:0002255	86.90	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.33	gold quality
lower esophagus mucosa	UBERON:0035834	84.51	gold quality
mucosa of transverse colon	UBERON:0004991	82.93	gold quality
bone marrow cell	CL:0002092	81.49	gold quality
body of pancreas	UBERON:0001150	81.01	gold quality
ventricular zone	UBERON:0003053	80.40	gold quality
pancreas	UBERON:0001264	80.15	gold quality
ganglionic eminence	UBERON:0004023	78.65	gold quality
tonsil	UBERON:0002372	78.57	gold quality
islet of Langerhans	UBERON:0000006	78.16	gold quality
hindlimb stylopod muscle	UBERON:0004252	77.81	gold quality
bone marrow	UBERON:0002371	77.33	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	77.20	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.08	gold quality
colonic epithelium	UBERON:0000397	76.15	gold quality
cortical plate	UBERON:0005343	74.48	gold quality
skeletal muscle tissue	UBERON:0001134	74.33	gold quality
rectum	UBERON:0001052	74.11	gold quality
gall bladder	UBERON:0002110	73.57	gold quality
vermiform appendix	UBERON:0001154	71.47	gold quality
lymph node	UBERON:0000029	69.63	gold quality
prostate gland	UBERON:0002367	69.58	gold quality
adrenal tissue	UBERON:0018303	69.32	gold quality
endometrium	UBERON:0001295	69.06	gold quality
minor salivary gland	UBERON:0001830	68.88	gold quality
substantia nigra	UBERON:0002038	68.42	gold quality
placenta	UBERON:0001987	68.38	gold quality
prefrontal cortex	UBERON:0000451	68.25	gold quality
stomach	UBERON:0000945	67.85	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.