RAB30-DT

Summary

RAB30-DT (RAB30 divergent transcript, HGNC:48672) is a long non-coding RNA gene on chromosome 11q14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48672
Approved symbol	RAB30-DT
Name	RAB30 divergent transcript
Location	11q14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000246067
Ensembl biotype	lncRNA
Entrez	100506233
RNAcentral	URS000075E7D1 — lncRNA, 673 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 34 — 34 lncRNA

ENST00000501011, ENST00000526795, ENST00000527627, ENST00000528156, ENST00000530270, ENST00000533528, ENST00000533708, ENST00000534499, ENST00000655468, ENST00000656330, ENST00000658004, ENST00000658917, ENST00000663168, ENST00000665456, ENST00000669005, ENST00000669058, ENST00000669459, ENST00000689041, ENST00000702935, ENST00000752551, ENST00000752552, ENST00000752553, ENST00000752554, ENST00000752555, ENST00000752556, ENST00000752557, ENST00000752558, ENST00000752559, ENST00000752560, ENST00000752561, ENST00000752562, ENST00000752563, ENST00000752564, ENST00000752565

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000501011 — 3 exons

Exon	Start	End
ENSE00001981613	83072623	83072804
ENSE00003987572	83072060	83072181
ENSE00004098801	83073303	83073968

Expression profiles

Bgee: expression breadth ubiquitous, 247 present calls, max score 93.17.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 13.7152 / max 305.8048, expressed in 1786 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
116054	13.7152	1786

Top tissues by expression

251 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	93.17	gold quality
corpus epididymis	UBERON:0004359	92.12	gold quality
right uterine tube	UBERON:0001302	92.06	gold quality
colonic epithelium	UBERON:0000397	91.77	gold quality
sural nerve	UBERON:0015488	90.85	gold quality
right lobe of thyroid gland	UBERON:0001119	90.42	gold quality
tendon	UBERON:0000043	90.24	gold quality
sperm	CL:0000019	90.22	gold quality
tibialis anterior	UBERON:0001385	90.01	silver quality
right testis	UBERON:0004534	89.78	gold quality
kidney epithelium	UBERON:0004819	89.70	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	89.61	gold quality
left testis	UBERON:0004533	89.51	gold quality
left lobe of thyroid gland	UBERON:0001120	89.42	gold quality
thyroid gland	UBERON:0002046	89.25	gold quality
popliteal artery	UBERON:0002250	89.12	gold quality
tibial artery	UBERON:0007610	89.10	gold quality
mucosa of transverse colon	UBERON:0004991	89.04	gold quality
gastrocnemius	UBERON:0001388	89.03	gold quality
adenohypophysis	UBERON:0002196	88.94	gold quality
muscle of leg	UBERON:0001383	88.78	gold quality
tibial nerve	UBERON:0001323	88.75	gold quality
left ovary	UBERON:0002119	88.69	gold quality
ileal mucosa	UBERON:0000331	88.68	gold quality
body of uterus	UBERON:0009853	88.51	gold quality
testis	UBERON:0000473	88.44	gold quality
monocyte	CL:0000576	88.36	gold quality
metanephros cortex	UBERON:0010533	88.36	gold quality
right coronary artery	UBERON:0001625	88.25	gold quality
left coronary artery	UBERON:0001626	88.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.83

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.