RAB3C-AS1

Summary

RAB3C-AS1 (RAB3C antisense RNA 1, HGNC:41259) is a long non-coding RNA gene on chromosome 5q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41259
Approved symbol	RAB3C-AS1
Name	RAB3C antisense RNA 1
Location	5q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248475
Ensembl biotype	lncRNA
Entrez	144699906

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000504240, ENST00000509476, ENST00000831055

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504240 — 2 exons

Exon	Start	End
ENSE00002059857	58741581	58742000
ENSE00002074262	58784724	58784779

Expression profiles

Bgee: expression breadth ubiquitous, 110 present calls, max score 87.07.

Top tissues by expression

110 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.07	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.55	gold quality
liver	UBERON:0002107	63.79	gold quality
monocyte	CL:0000576	63.69	gold quality
leukocyte	CL:0000738	63.57	gold quality
muscle tissue	UBERON:0002385	61.21	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.08	gold quality
bone marrow	UBERON:0002371	58.96	gold quality
islet of Langerhans	UBERON:0000006	57.98	gold quality
lymph node	UBERON:0000029	57.85	gold quality
blood	UBERON:0000178	55.87	gold quality
vermiform appendix	UBERON:0001154	55.75	gold quality
calcaneal tendon	UBERON:0003701	55.37	gold quality
tonsil	UBERON:0002372	55.21	silver quality
prefrontal cortex	UBERON:0000451	54.66	gold quality
smooth muscle tissue	UBERON:0001135	53.08	gold quality
gall bladder	UBERON:0002110	52.52	gold quality
muscle of leg	UBERON:0001383	51.43	gold quality
gastrocnemius	UBERON:0001388	51.19	gold quality
endocervix	UBERON:0000458	50.97	gold quality
superior frontal gyrus	UBERON:0002661	50.93	gold quality
adult mammalian kidney	UBERON:0000082	50.92	gold quality
corpus callosum	UBERON:0002336	50.86	gold quality
primary visual cortex	UBERON:0002436	50.27	gold quality
mucosa of transverse colon	UBERON:0004991	49.81	gold quality
placenta	UBERON:0001987	49.60	gold quality
heart left ventricle	UBERON:0002084	48.89	gold quality
tibial artery	UBERON:0007610	48.18	gold quality
popliteal artery	UBERON:0002250	48.17	gold quality
heart	UBERON:0000948	48.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.