RAB4A-AS1

Summary

RAB4A-AS1 (RAB4A antisense RNA 1, HGNC:55934) is a long non-coding RNA gene on chromosome 1q42.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55934
Approved symbol	RAB4A-AS1
Name	RAB4A antisense RNA 1
Location	1q42.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000177788
Ensembl biotype	lncRNA
Entrez	105373159
RNAcentral	URS0000CCE0B2 — lncRNA, 4082 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000429227, ENST00000436334, ENST00000653511, ENST00000654028, ENST00000656366, ENST00000660017, ENST00000662321, ENST00000693105

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429227 — 2 exons

Exon	Start	End
ENSE00001738047	229258281	229259120
ENSE00001774936	229270976	229271003

Expression profiles

Bgee: expression breadth ubiquitous, 160 present calls, max score 87.98.

Top tissues by expression

246 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	87.98	gold quality
cerebellar vermis	UBERON:0004720	84.93	gold quality
myocardium	UBERON:0002349	84.88	gold quality
vena cava	UBERON:0004087	81.34	gold quality
nasal cavity epithelium	UBERON:0005384	79.00	gold quality
thymus	UBERON:0002370	78.38	gold quality
cardia of stomach	UBERON:0001162	78.32	gold quality
pharyngeal mucosa	UBERON:0000355	78.05	gold quality
body of tongue	UBERON:0011876	77.45	gold quality
skeletal muscle tissue	UBERON:0001134	77.19	gold quality
tongue	UBERON:0001723	76.87	gold quality
trachea	UBERON:0003126	76.75	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.65	gold quality
subthalamic nucleus	UBERON:0001906	76.44	gold quality
nipple	UBERON:0002030	76.44	gold quality
superior surface of tongue	UBERON:0007371	76.31	gold quality
islet of Langerhans	UBERON:0000006	76.22	gold quality
dorsal plus ventral thalamus	UBERON:0001897	76.17	gold quality
pylorus	UBERON:0001166	76.07	gold quality
saphenous vein	UBERON:0007318	76.07	gold quality
ventral tegmental area	UBERON:0002691	76.04	gold quality
inferior vagus X ganglion	UBERON:0005363	76.03	gold quality
substantia nigra pars reticulata	UBERON:0001966	76.02	gold quality
pericardium	UBERON:0002407	76.01	gold quality
lateral globus pallidus	UBERON:0002476	76.01	gold quality
globus pallidus	UBERON:0001875	75.93	silver quality
lateral nuclear group of thalamus	UBERON:0002736	75.88	gold quality
gastrocnemius	UBERON:0001388	75.84	gold quality
pons	UBERON:0000988	75.82	gold quality
substantia nigra pars compacta	UBERON:0001965	75.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.39

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.