RAB5C-AS1

Summary

RAB5C-AS1 (RAB5C antisense RNA 1, HGNC:55289) is a long non-coding RNA gene on chromosome 17q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55289
Approved symbol	RAB5C-AS1
Name	RAB5C antisense RNA 1
Location	17q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267658
Ensembl biotype	lncRNA
Entrez	105371781
RNAcentral	URS00026A211D — lncRNA, 1178 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000586351, ENST00000840777, ENST00000840778, ENST00000840779, ENST00000840780

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000586351 — 3 exons

Exon	Start	End
ENSE00002828618	42154999	42155108
ENSE00004264450	42155768	42156050
ENSE00004264457	42154235	42154709

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 66.78.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.78	gold quality
smooth muscle tissue	UBERON:0001135	65.88	gold quality
bone marrow cell	CL:0002092	64.22	silver quality
adult mammalian kidney	UBERON:0000082	63.03	gold quality
kidney	UBERON:0002113	62.70	gold quality
placenta	UBERON:0001987	62.57	gold quality
monocyte	CL:0000576	62.23	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.78	gold quality
gall bladder	UBERON:0002110	61.38	gold quality
bone marrow	UBERON:0002371	60.77	gold quality
islet of Langerhans	UBERON:0000006	59.81	gold quality
prefrontal cortex	UBERON:0000451	59.51	gold quality
lymph node	UBERON:0000029	59.31	gold quality
granulocyte	CL:0000094	58.94	gold quality
cortex of kidney	UBERON:0001225	58.75	gold quality
blood	UBERON:0000178	58.22	gold quality
right lobe of liver	UBERON:0001114	57.86	gold quality
liver	UBERON:0002107	57.47	gold quality
spleen	UBERON:0002106	57.05	gold quality
right adrenal gland cortex	UBERON:0035827	56.60	gold quality
calcaneal tendon	UBERON:0003701	56.53	gold quality
omental fat pad	UBERON:0010414	56.23	gold quality
vermiform appendix	UBERON:0001154	55.09	gold quality
metanephros cortex	UBERON:0010533	54.98	gold quality
left adrenal gland	UBERON:0001234	54.88	gold quality
adrenal gland	UBERON:0002369	54.84	gold quality
left adrenal gland cortex	UBERON:0035825	54.53	gold quality
superior frontal gyrus	UBERON:0002661	54.49	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.48	gold quality
right adrenal gland	UBERON:0001233	54.33	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.55

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.