RAP1GDS1-AS1

Summary

RAP1GDS1-AS1 (RAP1GDS1 antisense RNA 1, HGNC:58856) is a long non-coding RNA gene on chromosome 4q23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58856
Approved symbol	RAP1GDS1-AS1
Name	RAP1GDS1 antisense RNA 1
Location	4q23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000214559
Ensembl biotype	lncRNA
Entrez	144093398

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000356499

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000356499 — 2 exons

Exon	Start	End
ENSE00002066839	98251688	98252005
ENSE00002072432	98261552	98261630

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 85.82.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.82	gold quality
colonic epithelium	UBERON:0000397	66.74	silver quality
bone marrow cell	CL:0002092	65.89	silver quality
lymph node	UBERON:0000029	65.06	gold quality
vermiform appendix	UBERON:0001154	62.46	gold quality
muscle tissue	UBERON:0002385	61.84	gold quality
bone marrow	UBERON:0002371	61.83	gold quality
prefrontal cortex	UBERON:0000451	60.99	gold quality
islet of Langerhans	UBERON:0000006	59.48	gold quality
mucosa of transverse colon	UBERON:0004991	59.42	gold quality
gall bladder	UBERON:0002110	58.75	gold quality
duodenum	UBERON:0002114	57.50	gold quality
calcaneal tendon	UBERON:0003701	57.36	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.63	gold quality
blood	UBERON:0000178	56.26	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.05	gold quality
monocyte	CL:0000576	55.35	gold quality
leukocyte	CL:0000738	55.19	gold quality
muscle of leg	UBERON:0001383	54.92	gold quality
right lung	UBERON:0002167	54.73	gold quality
gastrocnemius	UBERON:0001388	54.67	gold quality
kidney	UBERON:0002113	53.99	gold quality
adult mammalian kidney	UBERON:0000082	53.66	gold quality
placenta	UBERON:0001987	53.50	gold quality
liver	UBERON:0002107	53.47	silver quality
lower esophagus mucosa	UBERON:0035834	52.73	gold quality
pancreas	UBERON:0001264	52.44	gold quality
myometrium	UBERON:0001296	52.12	gold quality
left coronary artery	UBERON:0001626	52.03	gold quality
thoracic aorta	UBERON:0001515	51.28	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.08

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.