RASSF3-DT

Summary

RASSF3-DT (RASSF3 divergent transcript, HGNC:55489) is a long non-coding RNA gene on chromosome 12q14.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55489
Approved symbol	RASSF3-DT
Name	RASSF3 divergent transcript
Location	12q14.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000256670
Ensembl biotype	lncRNA
Entrez	105369804
RNAcentral	URS00026A21F2 — lncRNA, 261 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000546135

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000546135 — 2 exons

Exon	Start	End
ENSE00002225930	64609345	64609459
ENSE00002268579	64599078	64599216

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 91.28.

Top tissues by expression

81 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.28	gold quality
skeletal muscle tissue	UBERON:0001134	68.08	gold quality
bone marrow	UBERON:0002371	66.11	gold quality
monocyte	CL:0000576	65.92	gold quality
lymph node	UBERON:0000029	65.42	gold quality
blood	UBERON:0000178	64.97	gold quality
placenta	UBERON:0001987	64.03	gold quality
right lobe of liver	UBERON:0001114	63.95	gold quality
muscle of leg	UBERON:0001383	61.98	gold quality
prefrontal cortex	UBERON:0000451	61.69	gold quality
bone marrow cell	CL:0002092	61.35	silver quality
islet of Langerhans	UBERON:0000006	61.24	gold quality
corpus callosum	UBERON:0002336	60.84	gold quality
calcaneal tendon	UBERON:0003701	60.51	gold quality
Brodmann (1909) area 9	UBERON:0013540	59.76	gold quality
tibial artery	UBERON:0007610	59.15	gold quality
gastrocnemius	UBERON:0001388	59.13	gold quality
tonsil	UBERON:0002372	57.42	gold quality
stomach	UBERON:0000945	57.23	gold quality
body of stomach	UBERON:0001161	57.22	gold quality
rectum	UBERON:0001052	56.81	gold quality
body of pancreas	UBERON:0001150	56.64	gold quality
left coronary artery	UBERON:0001626	56.47	gold quality
left adrenal gland cortex	UBERON:0035825	54.86	gold quality
ascending aorta	UBERON:0001496	54.12	gold quality
lower esophagus muscularis layer	UBERON:0035833	54.07	gold quality
lower esophagus	UBERON:0013473	54.02	gold quality
putamen	UBERON:0001874	53.38	gold quality
thoracic aorta	UBERON:0001515	53.19	gold quality
left adrenal gland	UBERON:0001234	53.08	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.