RBMS3-AS2

Summary

RBMS3-AS2 (RBMS3 antisense RNA 2, HGNC:39988) is a long non-coding RNA gene on chromosome 3p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39988
Approved symbol	RBMS3-AS2
Name	RBMS3 antisense RNA 2
Location	3p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000203506
Ensembl biotype	lncRNA
Entrez	100873978
RNAcentral	URS00025E355D — lncRNA, 428 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000366321, ENST00000601343, ENST00000625355, ENST00000626662, ENST00000628068, ENST00000629296, ENST00000629416

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000366321 — 2 exons

Exon	Start	End
ENSE00001630737	29615975	29616479
ENSE00001722402	29642733	29642809

Expression profiles

Bgee: expression breadth ubiquitous, 125 present calls, max score 89.88.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0184 / max 9.4325, expressed in 4 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
41556	0.0184	4

Top tissues by expression

125 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	89.88	gold quality
sural nerve	UBERON:0015488	85.16	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.68	gold quality
skeletal muscle tissue	UBERON:0001134	79.92	gold quality
colonic epithelium	UBERON:0000397	78.88	gold quality
adrenal tissue	UBERON:0018303	77.52	gold quality
tonsil	UBERON:0002372	75.58	gold quality
bone marrow cell	CL:0002092	73.73	gold quality
hindlimb stylopod muscle	UBERON:0004252	73.68	gold quality
muscle of leg	UBERON:0001383	71.56	gold quality
gastrocnemius	UBERON:0001388	69.87	gold quality
heart left ventricle	UBERON:0002084	69.59	gold quality
corpus callosum	UBERON:0002336	68.88	gold quality
bone marrow	UBERON:0002371	67.82	gold quality
ventricular zone	UBERON:0003053	66.55	gold quality
heart	UBERON:0000948	65.86	gold quality
urinary bladder	UBERON:0001255	65.19	gold quality
apex of heart	UBERON:0002098	64.29	gold quality
liver	UBERON:0002107	63.77	gold quality
blood	UBERON:0000178	62.62	gold quality
right atrium auricular region	UBERON:0006631	62.53	gold quality
ganglionic eminence	UBERON:0004023	61.77	gold quality
adrenal gland	UBERON:0002369	60.06	gold quality
gall bladder	UBERON:0002110	58.40	gold quality
lung	UBERON:0002048	57.93	gold quality
left adrenal gland cortex	UBERON:0035825	57.84	gold quality
cortical plate	UBERON:0005343	57.81	gold quality
left adrenal gland	UBERON:0001234	57.30	gold quality
kidney	UBERON:0002113	57.20	gold quality
duodenum	UBERON:0002114	56.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.88

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.