RECQL
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Also known as RecQ1RecQL1
Summary
RECQL (RecQ like helicase, HGNC:9948) is a protein-coding gene on chromosome 12p12.1, encoding ATP-dependent DNA helicase Q1 (P46063). DNA helicase that plays a role in DNA damage repair and genome stability.
The protein encoded by this gene is a member of the RecQ DNA helicase family. DNA helicases are enzymes involved in various types of DNA repair, including mismatch repair, nucleotide excision repair and direct repair. The encoded protein is involved in the processing of Holliday junctions, the suppression of sister chromatid exchanges, telomere maintenance, and is required for genotoxic stress resistance. Defects in this gene have been associated with several types of cancer.
Source: NCBI Gene 5965 — RefSeq curated summary.
At a glance
- Gene–disease (curated): RECON progeroid syndrome (Moderate, GenCC) — +3 more curated relationships
- GWAS associations: 1
- Clinical variants (ClinVar): 1,549 total — 9 likely-pathogenic
- Phenotypes (HPO): 38
- Druggable target: yes — 115 molecules with ChEMBL bioactivity
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity unscored
- MANE Select transcript:
NM_002907
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:9948 |
| Approved symbol | RECQL |
| Name | RecQ like helicase |
| Location | 12p12.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | RecQ1, RecQL1 |
| Ensembl gene | ENSG00000004700 |
| Ensembl biotype | protein_coding |
| OMIM | 600537 |
| Entrez | 5965 |
Gene structure
Transcript identifiers
Ensembl transcripts: 16 — 16 protein_coding
ENST00000314748, ENST00000396093, ENST00000421138, ENST00000444129, ENST00000536240, ENST00000536964, ENST00000539672, ENST00000542432, ENST00000887707, ENST00000887708, ENST00000887709, ENST00000887710, ENST00000965021, ENST00000965022, ENST00000965023, ENST00000965024
RefSeq mRNA: 2 — MANE Select: NM_002907
NM_002907, NM_032941
CCDS: CCDS31756
Canonical transcript exons
ENST00000444129 — 15 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000822265 | 21491519 | 21491716 |
| ENSE00001233896 | 21499555 | 21499615 |
| ENSE00001349501 | 21468910 | 21470346 |
| ENSE00001373746 | 21501170 | 21501635 |
| ENSE00001616825 | 21475676 | 21475824 |
| ENSE00001626384 | 21486479 | 21486585 |
| ENSE00001641465 | 21473551 | 21473642 |
| ENSE00001652439 | 21483376 | 21483574 |
| ENSE00001663080 | 21476911 | 21476992 |
| ENSE00001739619 | 21471428 | 21471647 |
| ENSE00001743716 | 21477803 | 21477969 |
| ENSE00001756630 | 21475468 | 21475585 |
| ENSE00001760414 | 21474841 | 21474979 |
| ENSE00001777089 | 21470969 | 21471098 |
| ENSE00003789652 | 21490199 | 21490378 |
Expression profiles
Bgee: expression breadth ubiquitous, 289 present calls, max score 97.76.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 29.8685 / max 620.4743, expressed in 1796 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 130026 | 23.1557 | 1786 |
| 130024 | 5.5264 | 1518 |
| 130025 | 1.1864 | 724 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| buccal mucosa cell | CL:0002336 | 97.76 | gold quality |
| tibia | UBERON:0000979 | 97.21 | gold quality |
| calcaneal tendon | UBERON:0003701 | 96.65 | gold quality |
| parietal pleura | UBERON:0002400 | 96.40 | gold quality |
| pleura | UBERON:0000977 | 96.12 | gold quality |
| visceral pleura | UBERON:0002401 | 96.05 | gold quality |
| superficial temporal artery | UBERON:0001614 | 95.70 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 94.32 | gold quality |
| tendon | UBERON:0000043 | 94.29 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 93.96 | gold quality |
| synovial joint | UBERON:0002217 | 93.85 | gold quality |
| oral cavity | UBERON:0000167 | 93.73 | gold quality |
| skin of hip | UBERON:0001554 | 93.68 | gold quality |
| hair follicle | UBERON:0002073 | 93.16 | gold quality |
| cauda epididymis | UBERON:0004360 | 92.32 | gold quality |
| layer of synovial tissue | UBERON:0007616 | 92.30 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 92.19 | gold quality |
| stromal cell of endometrium | CL:0002255 | 92.14 | gold quality |
| lymph node | UBERON:0000029 | 92.02 | gold quality |
| vermiform appendix | UBERON:0001154 | 91.91 | gold quality |
| cartilage tissue | UBERON:0002418 | 91.64 | gold quality |
| blood vessel layer | UBERON:0004797 | 91.23 | gold quality |
| monocyte | CL:0000576 | 91.11 | gold quality |
| endometrium | UBERON:0001295 | 91.11 | gold quality |
| mononuclear cell | CL:0000842 | 91.07 | gold quality |
| leukocyte | CL:0000738 | 90.97 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 90.94 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 90.93 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 90.86 | gold quality |
| upper leg skin | UBERON:0004262 | 90.86 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 6.27 |
| E-MTAB-5061 | no | 3.53 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): E2F4, E2F6
miRNA regulators (miRDB)
73 targeting RECQL, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-433-3P | 99.98 | 69.37 | 1203 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-4803 | 99.98 | 71.99 | 3117 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-3910 | 99.95 | 71.13 | 2227 |
| HSA-MIR-548J-3P | 99.94 | 72.61 | 4881 |
| HSA-MIR-548AE-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-548AQ-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-548AH-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AM-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-4778-3P | 99.93 | 70.40 | 1818 |
| HSA-MIR-137-3P | 99.87 | 74.74 | 2401 |
| HSA-MIR-6844 | 99.82 | 70.69 | 2423 |
| HSA-MIR-6875-3P | 99.82 | 70.26 | 2983 |
| HSA-MIR-3121-3P | 99.82 | 71.96 | 3630 |
| HSA-MIR-577 | 99.78 | 69.13 | 2479 |
| HSA-MIR-623 | 99.76 | 68.16 | 1170 |
| HSA-MIR-3934-3P | 99.76 | 65.51 | 1351 |
| HSA-MIR-4755-5P | 99.71 | 70.34 | 2716 |
| HSA-MIR-5006-3P | 99.71 | 70.26 | 2728 |
| HSA-MIR-5580-3P | 99.70 | 69.41 | 2052 |
| HSA-MIR-1283 | 99.69 | 72.42 | 3009 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity Not yet evaluated (unscored). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- Molecular cloning of a splicing variant of human RECQL helicase. (PMID:12419324)
- characterization of DNA-unwinding activity (PMID:12419808)
- RECQ1 alone is able to unwind short DNA duplexes (<110 bp), whereas considerably longer substrates (501 bp) can be unwound only in the presence of human replication protein A (hRPA) (PMID:15096578)
- RECQ1 has a role in a pathway involving mismatch repair factors (PMID:15886194)
- analysis of enzymatic properties of the RECQ1 helicase and DNA unwinding and strand annealing activities (PMID:15899892)
- Identification of RecQL1 as a predominant ATP-dependent, Holliday junction branch migrator present in human nuclear extracts. (PMID:16260474)
- Our findings suggest that higher-order oligomers are associated with DNA strand annealing, and lower-order oligomers with DNA unwinding. (PMID:17227144)
- RecQ DNA helicase resolves genetic recombination and suppressive aberrant recombination. (PMID:17483412)
- Results support that endogenous DNA damage that occurs during DNA replication and remains unrepaired in cancer cells due to RecQL1 silencing induces cancer cell-specific mitotic catastrophe through a less-strict checkpoint in cancer than in normal cells. (PMID:17953710)
- results provide the first evidence for a role of human RECQ1 in the response to DNA damage and chromosomal stability maintenance and point to the vital importance of RECQ1 in genome homeostasis (PMID:18074021)
- Human RecQ helicases, BLM and RECQ1, display distinct DNA substrate specificities (PMID:18448429)
- properties of the RECQ1 helicase may have important implications for the function of RECQ1 in maintenance of genomic stability (PMID:18495662)
- A crystal structure of a truncated form of the human RECQ1 protein with Mg-ADP, is presented. (PMID:19151156)
- Topoisomerase I and RecQL1 promote the lytic reactivation of Epstein-Barr virus. (PMID:19494003)
- These results indicate that RECQ1 and RECQ4 are integral components of the human replication complex and play distinct roles in DNA replication initiation and replication fork progression in vivo. (PMID:20065033)
- Histological data reveal the potential of RecQL1 as a biological marker predicting the malignancy and progression of liver cancer. (PMID:20198302)
- The beta-hairpin is a key structural element that controls not only the enzymatic activity of RECQ1, but also the balance between the multiple oligomeric states of the protein. (PMID:21059676)
- RECQ1 might represent a new suitable target for anti cancer therapies aimed to arrest cell proliferation in brain gliomas. (PMID:21752281)
- RAD54 that lacks helicase activity is more efficient in DNA heterology bypass than BLM or REQ1 helicases. (PMID:22356911)
- Data show that RECQ1 associates with PARP-1 in nuclear extracts and exhibits direct protein interaction in vitro. (PMID:22542292)
- The data suggested that HomolD-containing promoters require the RNA polymerase II machinery and the proteins DDB1 and RECQL for accurate transcription. (PMID:22705827)
- RECQ1 might have a similar role to that of WRN in helping cells deal with stalled replication forks. (PMID:23095637)
- RECQ1 promotes restart of DNA replication forks reversed by DNA topoisomerase I inhibition. (PMID:23396353)
- a crucial role for RECQ1 at naturally occurring fork stalling sites and implicate RECQ1 in mechanisms underlying common fragile site instability in cancer. (PMID:23601052)
- An interaction of RECQ1 with Ku70/80 and a role of the human RecQ helicase in double-strand break repair through nonhomologous end-joining. (PMID:23650516)
- RECQL1 expression was exceptionally high in rapidly growing ovarian cancer cells. (PMID:23951333)
- RECQL1 may participate in the same pathway as WRN, probably in telomere replication. (PMID:24623817)
- results indicate that RECQL1 plays an important regulatory role in cancer cell proliferation and tumor progression (PMID:24854846)
- The stimulation of helicase-catalyzed protein displacement is observed with the DNA helicase RECQ1, suggesting a conserved functional interaction of RPA-interacting helicases. (PMID:24895130)
- our results provide first indication of nonredundant participation of WRN and RECQ1 in protection from the potentially carcinogenic effects (PMID:25228686)
- RECQL1 is a prognostic factor for epithelial ovarian cancer and contributes to potential malignancy by inhibiting apoptosis. (PMID:25424877)
- A novel function of RECQ1 is identified: in gene regulation and indicates that RECQ1 contributes to tumor development and progression, in part, by regulating the expression of key genes that promote cancer cell migration, invasion and metastasis. (PMID:25483193)
- we show that RECQ1 can form what appears to be a flat, homotetrameric complex and propose that RECQ1 tetramers are involved in Holliday junction recognition (PMID:25831490)
- RECQL is a breast cancer susceptibility gene. (PMID:25915596)
- RECQL is a potential breast cancer susceptibility gene; mutations in this gene contribute to familial breast cancer development. (PMID:25945795)
- RECQL is a new breast cancer susceptibility gene. (PMID:26125302)
- RECQL is a DNA helicase in breast cancer [editorial] (PMID:26387136)
- To better understand the roles of RECQ1, two AL mutants (W227A and F231A) in full-length RECQ1 were characterized biochemically and genetically (PMID:26455304)
- RECQ1 A159C genotype may be a prognostic or predictive factor for resectable pancreatic cancer patients who are treated with adjuvant 5-FU before and after 5-FU-based chemoradiation. (PMID:26725729)
- Study detected five different RECQL mutation in six unrelated breast cancer patients. The identified mutations include one frame-shift deletion, two splicing site mutation and one nonsense mutation. (PMID:27125668)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | recql | ENSDARG00000007175 |
| mus_musculus | Recql | ENSMUSG00000030243 |
| rattus_norvegicus | Recql | ENSRNOG00000012602 |
| caenorhabditis_elegans | WBGENE00019334 |
Paralogs (4): RECQL5 (ENSG00000108469), RECQL4 (ENSG00000160957), WRN (ENSG00000165392), BLM (ENSG00000197299)
Protein
Protein identifiers
ATP-dependent DNA helicase Q1 — P46063 (reviewed: P46063)
Alternative names: DNA 3’-5’ helicase Q1, DNA helicase, RecQ-like type 1, DNA-dependent ATPase Q1, RecQ protein-like 1
All UniProt accessions (7): P46063, F5GYB7, F5H2L2, F5H3W0, F5H4P4, F8WA66, F8WD97
UniProt curated annotations — full annotation on UniProt →
Function. DNA helicase that plays a role in DNA damage repair and genome stability. Exhibits a Mg(2+)- and ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3’-5’ direction. Full-length protein unwinds forked DNA substrates, resolves Holliday junctions, and has DNA strand annealing activity. Plays a role in restoring regressed replication forks. Required to restart stalled replication forks induced by abortive topoisomerase 1 and 2 lesions. Does not unwind G-quadruplex DNA. May play a role in the repair of DNA that is damaged by ultraviolet light or other mutagens.
Subunit / interactions. May form homodimers or higher order oligomers. Forms a dimer in complex with tailed duplex DNA; the DNA only mkaes contact with one of the monomers. Probably forms flat tetramers on Holliday junction DNA. Interacts with EXO1. Interacts with MLH1. Interacts with PARP1.
Subcellular location. Nucleus.
Tissue specificity. High expression in heart, lung, skeletal muscle and kidney, low expression in brain.
Disease relevance. RECON progeroid syndrome (RECON) [MIM:620370] An autosomal recessive syndrome characterized by short stature, progeroid facial features, a hypoplastic nose, xeroderma, skin photosensitivity, muscle wasting with reduced subcutaneous fat, and slender elongated thumbs. The disease is caused by variants affecting the gene represented in this entry.
Cofactor. Binds 1 Zn(2+) per monomer.
Domain organisation. A helical hairpin (residues 554-573) in the winged-helix proble DNA-binding domain couples the ATPase (and probably ssDNA translocation) to DNA unwinding. The isolated WH domain (residues 481-624) anneals DNA as well as full-length protein.
Similarity. Belongs to the helicase family. RecQ subfamily.
RefSeq proteins (2): NP_002898, NP_116559 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001650 | Helicase_C-like | Domain |
| IPR004589 | DNA_helicase_ATP-dep_RecQ | Family |
| IPR011545 | DEAD/DEAH_box_helicase_dom | Domain |
| IPR014001 | Helicase_ATP-bd | Domain |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
| IPR032284 | RecQ_Zn-bd | Domain |
| IPR036388 | WH-like_DNA-bd_sf | Homologous_superfamily |
Pfam: PF00270, PF00271, PF16124
Enzyme classification (BRENDA):
- EC 3.6.4.12 — DNA helicase (BRENDA: 0 organisms, 0 substrates, 0 inhibitors, 0 Km, 0 kcat entries)
Catalyzed reactions (Rhea), 2 shown:
- ATP + H2O = ADP + phosphate + H(+) (RHEA:13065)
- dATP + H2O = dADP + phosphate + H(+) (RHEA:51908)
UniProt features (92 total): helix 26, strand 20, binding site 11, mutagenesis site 6, modified residue 5, sequence variant 5, sequence conflict 5, compositionally biased region 4, turn 3, domain 2, region of interest 2, chain 1, active site 1, short sequence motif 1
Structure
Experimental structures (PDB)
7 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2V1X | X-RAY DIFFRACTION | 2 |
| 9I22 | X-RAY DIFFRACTION | 2.42 |
| 8YRS | X-RAY DIFFRACTION | 2.43 |
| 6JTZ | X-RAY DIFFRACTION | 2.8 |
| 2WWY | X-RAY DIFFRACTION | 2.9 |
| 4U7D | X-RAY DIFFRACTION | 3.4 |
| 9I23 | X-RAY DIFFRACTION | 3.69 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P46063-F1 | 86.55 | 0.69 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 119
Ligand- & substrate-binding residues (11): 91; 93; 96; 116; 118; 119; 120; 453; 471; 475; 478
Post-translational modifications (5): 514, 522, 597, 602, 634
Mutagenesis-validated functional residues (6):
| Position | Phenotype |
|---|---|
| 119 | abrogates helicase activity. |
| 511–514 | considerably reduced dna unwinding and branch migration on holliday junctions, small change in dna annealing. |
| 528 | reduced dna unwinding and branch migration on holliday junctions, small change in dna annealing. |
| 555–572 | complete loss of dna fork unwinding, retains atpase activity (in a 49-616 residue fragment). |
| 560–567 | complete loss of dna fork unwinding, retains atpase activity (in a 49-616 residue fragment). |
| 564 | nearly complete loss of dna fork unwinding, retains atpase activity (in a 49-616 residue fragment). |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 264 (showing top):
GOBP_DNA_TEMPLATED_DNA_REPLICATION_MAINTENANCE_OF_FIDELITY, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, MORF_BRCA1, PUJANA_CHEK2_PCC_NETWORK, MARTINEZ_RB1_TARGETS_UP, ONKEN_UVEAL_MELANOMA_UP, DEURIG_T_CELL_PROLYMPHOCYTIC_LEUKEMIA_DN, KORKOLA_EMBRYONAL_CARCINOMA_UP, DAZARD_RESPONSE_TO_UV_SCC_UP, GOBP_DNA_DAMAGE_RESPONSE, HIF1_Q3, SANSOM_APC_TARGETS_UP, DODD_NASOPHARYNGEAL_CARCINOMA_UP, HAHTOLA_SEZARY_SYNDROM_UP, TIEN_INTESTINE_PROBIOTICS_24HR_UP
GO Biological Process (5): double-strand break repair via homologous recombination (GO:0000724), DNA replication (GO:0006260), DNA repair (GO:0006281), replication fork processing (GO:0031297), DNA recombination (GO:0006310)
GO Molecular Function (16): DNA helicase activity (GO:0003678), ATP binding (GO:0005524), four-way junction helicase activity (GO:0009378), ATP hydrolysis activity (GO:0016887), double-stranded DNA helicase activity (GO:0036121), 3’-5’ DNA helicase activity (GO:0043138), metal ion binding (GO:0046872), DNA/DNA annealing activity (GO:1990814), nucleotide binding (GO:0000166), nucleic acid binding (GO:0003676), DNA binding (GO:0003677), helicase activity (GO:0004386), protein binding (GO:0005515), hydrolase activity (GO:0016787), isomerase activity (GO:0016853), catalytic activity, acting on a nucleic acid (GO:0140640)
GO Cellular Component (5): nucleus (GO:0005634), nucleoplasm (GO:0005654), chromosome (GO:0005694), cytoplasm (GO:0005737), membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| DNA metabolic process | 3 |
| DNA helicase activity | 3 |
| catalytic activity | 3 |
| cellular anatomical structure | 3 |
| ATP-dependent activity | 2 |
| binding | 2 |
| recombinational repair | 1 |
| double-strand break repair | 1 |
| DNA biosynthetic process | 1 |
| DNA damage response | 1 |
| DNA-templated DNA replication maintenance of fidelity | 1 |
| helicase activity | 1 |
| ATP-dependent activity, acting on DNA | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| cation binding | 1 |
| single-stranded DNA binding | 1 |
| catalytic activity, acting on DNA | 1 |
| annealing activity | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| nucleic acid binding | 1 |
| nucleic acid conformation isomerase activity | 1 |
| catalytic activity, acting on a nucleic acid | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| intracellular membraneless organelle | 1 |
| intracellular anatomical structure | 1 |
Protein interactions and networks
STRING
1314 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| RECQL | EXO1 | Q9UQ84 | 931 |
| RECQL | DNA2 | P51530 | 866 |
| RECQL | XRCC6 | P12956 | 856 |
| RECQL | TOP3A | Q13472 | 842 |
| RECQL | RMI1 | Q9H9A7 | 834 |
| RECQL | RMI2 | Q96E14 | 780 |
| RECQL | KPNA2 | P52292 | 779 |
| RECQL | RAD51 | Q06609 | 776 |
| RECQL | XRCC5 | P13010 | 763 |
| RECQL | FEN1 | P39748 | 732 |
| RECQL | KPNA4 | O00629 | 714 |
| RECQL | SMARCAL1 | Q9NZC9 | 714 |
| RECQL | FANCM | Q8IYD8 | 698 |
| RECQL | BRIP1 | Q9BX63 | 676 |
| RECQL | KPNA1 | P52294 | 648 |
IntAct
145 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| APLF | PARP1 | psi-mi:“MI:0914”(association) | 0.870 |
| MED20 | MED19 | psi-mi:“MI:0914”(association) | 0.840 |
| RECQL | PARP1 | psi-mi:“MI:0407”(direct interaction) | 0.750 |
| RECQL | PARP1 | psi-mi:“MI:0915”(physical association) | 0.750 |
| RECQL | PARP1 | psi-mi:“MI:0914”(association) | 0.750 |
| PARP1 | RECQL | psi-mi:“MI:0557”(adp ribosylation reaction) | 0.750 |
| CNOT3 | CNOT1 | psi-mi:“MI:0914”(association) | 0.740 |
| PSMC5 | PSMD11 | psi-mi:“MI:0914”(association) | 0.730 |
| SLC39A5 | FAM171A2 | psi-mi:“MI:0914”(association) | 0.640 |
| SNRNP27 | UBA6 | psi-mi:“MI:0914”(association) | 0.530 |
| USP47 | DENR | psi-mi:“MI:0914”(association) | 0.530 |
| CYP1A1 | SNX3 | psi-mi:“MI:0914”(association) | 0.530 |
| GPS1 | PXDNL | psi-mi:“MI:0914”(association) | 0.530 |
| KPNA4 | RECQL | psi-mi:“MI:0915”(physical association) | 0.510 |
| KPNA2 | RECQL | psi-mi:“MI:0915”(physical association) | 0.510 |
| RECQL | RECQL | psi-mi:“MI:0915”(physical association) | 0.490 |
| CFTR | CNOT1 | psi-mi:“MI:0914”(association) | 0.480 |
| gag-pol | EIF3F | psi-mi:“MI:0914”(association) | 0.460 |
| H3C1 | SMCHD1 | psi-mi:“MI:2364”(proximity) | 0.410 |
BioGRID (337): RECQL (Affinity Capture-MS), FEN1 (Co-fractionation), MSH2 (Co-fractionation), RECQL (Affinity Capture-MS), RECQL (Proximity Label-MS), RECQL (Proximity Label-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS), RECQL (Affinity Capture-MS)
ESM2 similar proteins: A0A023PXF5, A6QSQ0, A6SBT4, A7EY76, F1RCY6, O13559, O18475, O48534, P18708, P40105, P40434, P40889, P43538, P46063, P46459, P46460, P46461, P54351, Q14527, Q1EB85, Q2TBP1, Q2U587, Q3B7N1, Q3E7Y4, Q5R410, Q5RF63, Q6AYJ1, Q6PCN7, Q7ZU90, Q86WJ1, Q8NHQ9, Q8R5F7, Q95216, Q96C10, Q99J87, Q9BYX4, Q9CXF7, Q9DGP9, Q9EPU0, Q9FF61
Diamond homologs: A2XVF7, A3AVH5, A4RK80, A8WK63, D4ACP5, G2TRN7, O09053, O18017, O34748, O88700, O93530, O94761, O94762, P0CQ88, P0CQ89, P15043, P35187, P40724, P46063, P50729, P54132, P71359, P73421, Q09811, Q0WVW7, Q14191, Q19546, Q5RF63, Q5UPX0, Q6AYJ1, Q75NR7, Q7RZH4, Q8L840, Q8VID5, Q9CL21, Q9DEY9, Q9FT70, Q9FT72, Q9FT73, Q9FT74
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 140 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| DNA damage response | 11 | 4.6× | 7e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
1549 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 9 |
| Uncertain significance | 1006 |
| Likely benign | 394 |
| Benign | 56 |
Top pathogenic / likely-pathogenic (9)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1685425 | NM_002907.4(RECQL):c.502-2A>G | Likely pathogenic |
| 2581010 | NM_002907.4(RECQL):c.1082C>A (p.Ser361Ter) | Likely pathogenic |
| 4845850 | NM_002907.4(RECQL):c.1241_1242del (p.Cys414fs) | Likely pathogenic |
| 584813 | NM_002907.4(RECQL):c.676delinsGATGTAGCATGT (p.Gln226fs) | Likely pathogenic |
| 801376 | NM_002907.4(RECQL):c.1099-2A>G | Likely pathogenic |
| 801380 | NM_002907.4(RECQL):c.677_678insTGTA (p.Gln226fs) | Likely pathogenic |
| 801381 | NM_002907.4(RECQL):c.675_676insGATGTAG (p.Gln226fs) | Likely pathogenic |
| 801388 | NM_002907.4(RECQL):c.215-20_223del | Likely pathogenic |
| 801391 | NM_002907.4(RECQL):c.-45-1G>A | Likely pathogenic |
SpliceAI
2599 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:21470347:C:CC | acceptor_gain | 1.0000 |
| 12:21470967:AC:A | donor_gain | 1.0000 |
| 12:21470968:CC:C | donor_gain | 1.0000 |
| 12:21471094:CTTCT:C | acceptor_gain | 1.0000 |
| 12:21471097:CT:C | acceptor_gain | 1.0000 |
| 12:21471099:C:CC | acceptor_gain | 1.0000 |
| 12:21471423:CATA:C | donor_gain | 1.0000 |
| 12:21471424:ATAC:A | donor_loss | 1.0000 |
| 12:21471426:A:AC | donor_gain | 1.0000 |
| 12:21471426:ACTTA:A | donor_loss | 1.0000 |
| 12:21471427:C:CT | donor_gain | 1.0000 |
| 12:21471427:CT:C | donor_gain | 1.0000 |
| 12:21471427:CTTA:C | donor_gain | 1.0000 |
| 12:21471430:A:AC | donor_gain | 1.0000 |
| 12:21471431:A:C | donor_gain | 1.0000 |
| 12:21471435:A:AC | donor_gain | 1.0000 |
| 12:21471436:C:CC | donor_gain | 1.0000 |
| 12:21471436:CTG:C | donor_gain | 1.0000 |
| 12:21471643:AAATG:A | acceptor_gain | 1.0000 |
| 12:21471644:AATG:A | acceptor_gain | 1.0000 |
| 12:21471645:ATG:A | acceptor_gain | 1.0000 |
| 12:21471645:ATGC:A | acceptor_loss | 1.0000 |
| 12:21471646:TG:T | acceptor_gain | 1.0000 |
| 12:21471646:TGCT:T | acceptor_loss | 1.0000 |
| 12:21471647:GCTG:G | acceptor_loss | 1.0000 |
| 12:21471648:C:CC | acceptor_gain | 1.0000 |
| 12:21471648:C:CG | acceptor_loss | 1.0000 |
| 12:21471650:G:C | acceptor_gain | 1.0000 |
| 12:21471653:A:AC | acceptor_gain | 1.0000 |
| 12:21473548:CACCA:C | donor_loss | 1.0000 |
AlphaMissense
4317 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:21483381:C:G | R232T | 1.000 |
| 12:21483383:G:C | F231L | 1.000 |
| 12:21483383:G:T | F231L | 1.000 |
| 12:21483385:A:G | F231L | 1.000 |
| 12:21475474:G:T | R404S | 0.999 |
| 12:21475478:A:C | S402R | 0.999 |
| 12:21475478:A:T | S402R | 0.999 |
| 12:21475480:T:G | S402R | 0.999 |
| 12:21475484:T:A | Q400H | 0.999 |
| 12:21475484:T:G | Q400H | 0.999 |
| 12:21475504:A:G | S394P | 0.999 |
| 12:21475555:C:G | G377R | 0.999 |
| 12:21475555:C:T | G377R | 0.999 |
| 12:21475560:C:T | G375D | 0.999 |
| 12:21475562:A:C | F374L | 0.999 |
| 12:21475562:A:T | F374L | 0.999 |
| 12:21475564:A:G | F374L | 0.999 |
| 12:21475575:G:T | A370E | 0.999 |
| 12:21475696:A:G | W360R | 0.999 |
| 12:21475696:A:T | W360R | 0.999 |
| 12:21483382:T:C | R232G | 0.999 |
| 12:21483393:C:T | G228E | 0.999 |
| 12:21483394:C:G | G228R | 0.999 |
| 12:21483394:C:T | G228R | 0.999 |
| 12:21483401:A:C | S225R | 0.999 |
| 12:21483401:A:T | S225R | 0.999 |
| 12:21483403:T:G | S225R | 0.999 |
| 12:21483407:G:C | C223W | 0.999 |
| 12:21483417:T:A | E220V | 0.999 |
| 12:21471083:A:C | F561L | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000133091 (12:21495467 G>A), RS1000184439 (12:21480091 T>A), RS1000385481 (12:21476477 C>T), RS1000401080 (12:21482764 A>C), RS1000479322 (12:21489666 C>A,T), RS1000519498 (12:21481242 T>C,G), RS1000560242 (12:21494336 C>T), RS1000575319 (12:21499900 C>A), RS1000729390 (12:21487808 T>A), RS1000814845 (12:21475257 ATTATC>A), RS1000835106 (12:21493871 T>A), RS1000882021 (12:21476182 T>A), RS1000935943 (12:21488602 A>G), RS1000997660 (12:21499704 C>A,T), RS1001077499 (12:21488312 G>A)
Disease associations
OMIM: gene MIM:600537 | disease phenotypes: MIM:620370, MIM:114480
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| RECON progeroid syndrome | Moderate | Autosomal recessive |
| breast cancer | Disputed Evidence | Autosomal dominant |
| familial ovarian cancer | No Known Disease Relationship | Unknown |
ClinGen Gene-Disease Validity (2)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| hereditary breast carcinoma | Disputed | AD |
| familial ovarian cancer | No Known Disease Relationship | AD |
Mondo (8): familial ovarian cancer (MONDO:0016248), RECON progeroid syndrome (MONDO:0957266), hepatoblastoma (MONDO:0018666), hereditary breast carcinoma (MONDO:0016419), cancer (MONDO:0004992), hereditary neoplastic syndrome (MONDO:0015356), hereditary breast ovarian cancer syndrome (MONDO:0003582), breast cancer (MONDO:0007254)
Orphanet (5): Hepatoblastoma (Orphanet:449), Hereditary breast cancer (Orphanet:227535), Inherited cancer-predisposing syndrome (Orphanet:140162), Hereditary breast and/or ovarian cancer syndrome (Orphanet:145), OBSOLETE: Familial ovarian cancer (Orphanet:213517)
HPO phenotypes
38 total (30 of 38 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000233 | Thin vermilion border |
| HP:0000252 | Microcephaly |
| HP:0000311 | Round face |
| HP:0000319 | Smooth philtrum |
| HP:0000418 | Narrow nasal ridge |
| HP:0000426 | Prominent nasal bridge |
| HP:0000430 | Underdeveloped nasal alae |
| HP:0000463 | Anteverted nares |
| HP:0000490 | Deeply set eye |
| HP:0000678 | Dental crowding |
| HP:0000696 | Delayed eruption of permanent teeth |
| HP:0000958 | Dry skin |
| HP:0000963 | Thin skin |
| HP:0000992 | Cutaneous photosensitivity |
| HP:0001007 | Hirsutism |
| HP:0001097 | Keratoconjunctivitis sicca |
| HP:0001166 | Arachnodactyly |
| HP:0001382 | Joint hypermobility |
| HP:0001510 | Growth delay |
| HP:0001873 | Thrombocytopenia |
| HP:0001903 | Anemia |
| HP:0002719 | Recurrent infections |
| HP:0003202 | Skeletal muscle atrophy |
| HP:0003593 | Infantile onset |
| HP:0004322 | Short stature |
| HP:0005328 | Progeroid facial appearance |
| HP:0007646 | Absent lower eyelashes |
| HP:0008407 | Hyperconvex thumb nails |
| HP:0008551 | Microtia |
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006585_965 | Blood protein levels | 9.000000e-27 |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D018197 | Hepatoblastoma | C04.557.435.380 |
| D061325 | Hereditary Breast and Ovarian Cancer Syndrome | C04.588.180.483; C04.588.322.455.431; C04.700.517; C12.050.351.500.056.630.705.431; C12.050.351.937.418.685.431; C12.100.250.056.630.705.431; C12.900.418.685.431; C16.320.700.517; C17.800.090.500.483; C19.344.410.431; C19.391.630.705.431 |
| D009386 | Neoplastic Syndromes, Hereditary | C04.700; C16.320.700 |
| C562840 | Breast Cancer, Familial (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1293236 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
115 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 804,253 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1009 | LEVODOPA | 4 | 103,854 |
| CHEMBL1010 | CEFOTAXIME SODIUM | 4 | 4,928 |
| CHEMBL1014 | CANDESARTAN CILEXETIL | 4 | 11,194 |
| CHEMBL1023 | BEXAROTENE | 4 | 40,951 |
| CHEMBL1046 | AMINOCAPROIC ACID | 4 | 95,343 |
| CHEMBL1057 | FLUORESCEIN | 4 | 329,940 |
| CHEMBL1065 | METHYSERGIDE | 4 | 8,455 |
| CHEMBL1117 | IDARUBICIN | 4 | 136,065 |
| CHEMBL1133 | OXYBUTYNIN CHLORIDE | 4 | 8,751 |
| CHEMBL11359 | CISPLATIN | 4 | |
| CHEMBL1200522 | AVOBENZONE | 4 | 34,067 |
| CHEMBL1200758 | AMPICILLIN SODIUM | 4 | 5,602 |
| CHEMBL1200938 | METHYSERGIDE MALEATE | 4 | 4 |
| CHEMBL1200948 | TRIMIPRAMINE MALEATE | 4 | 4,595 |
| CHEMBL1201043 | CEPHAPIRIN SODIUM | 4 | 3,301 |
| CHEMBL1201049 | ECONAZOLE NITRATE | 4 | 3,918 |
| CHEMBL1201356 | METHYLERGONOVINE | 4 | 3,335 |
| CHEMBL1208422 | ROSE BENGAL FREE ACID | 4 | 476 |
| CHEMBL121663 | DEQUALINIUM CHLORIDE | 4 | 4,224 |
| CHEMBL1240 | PROPANTHELINE BROMIDE | 4 | 5,250 |
| CHEMBL1280 | VERAPAMIL HYDROCHLORIDE | 4 | |
| CHEMBL12856 | INAMRINONE | 4 | |
| CHEMBL135 | ESTRADIOL | 4 | |
| CHEMBL135400 | ZOPICLONE | 4 | |
| CHEMBL1417019 | MITOXANTRONE HYDROCHLORIDE | 4 | |
| CHEMBL1437 | NOREPINEPHRINE | 4 | |
| CHEMBL1447476 | BITHIONOLATE SODIUM | 4 | |
| CHEMBL1477036 | DOCUSATE | 4 | |
| CHEMBL1517 | OXYTETRACYCLINE | 4 | |
| CHEMBL1534 | RIBOFLAVIN | 4 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
1727 potent at pChembl≥5 of 5018 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.00 | Potency | 1 | nM | ACTINONIN |
| 8.00 | Potency | 10 | nM | CHEMBL1383575 |
| 7.80 | Potency | 15.8 | nM | CHEMBL1367444 |
| 7.70 | Potency | 20 | nM | CHEMBL1445279 |
| 7.65 | Potency | 22.4 | nM | CHEMBL1427696 |
| 7.65 | Potency | 22.4 | nM | CHEMBL3212668 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1373063 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1374949 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1565317 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1502893 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1439221 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1608986 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1526090 |
| 7.60 | Potency | 25.1 | nM | CHEMBL3208086 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1417273 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1573985 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1348698 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1418131 |
| 7.60 | Potency | 25.1 | nM | CHEMBL1311130 |
| 7.60 | Potency | 25.1 | nM | CHEMBL446240 |
| 7.55 | Kd | 28.13 | nM | CHEMBL3752910 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1372612 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1578026 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1491039 |
| 7.55 | Potency | 28.2 | nM | TYRPHOSTIN 47 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1334855 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1576131 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1480560 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1335249 |
| 7.55 | Potency | 28.2 | nM | MICONAZOLE NITRATE |
| 7.55 | Potency | 28.2 | nM | CHEMBL1571837 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1420974 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1599050 |
| 7.55 | Potency | 28.2 | nM | TICLOPIDINE HYDROCHLORIDE |
| 7.55 | Potency | 28.2 | nM | CHEMBL1521482 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1443429 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1534809 |
| 7.55 | Potency | 28.2 | nM | CHEMBL408850 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1445414 |
| 7.55 | Potency | 28.2 | nM | CHEMBL1500912 |
| 7.52 | ED50 | 30.43 | nM | CHEMBL3752910 |
| 7.50 | Potency | 31.6 | nM | CHEMBL1450895 |
| 7.50 | Potency | 31.6 | nM | CHEMBL1461262 |
| 7.50 | Potency | 31.6 | nM | CHEMBL1504207 |
| 7.50 | Potency | 31.6 | nM | CHEMBL1466446 |
| 7.50 | Potency | 31.6 | nM | CHEMBL1586490 |
| 7.50 | Potency | 31.6 | nM | CHEMBL1485734 |
| 7.45 | Potency | 35.5 | nM | CHEMBL1331485 |
| 7.45 | Potency | 35.5 | nM | CHEMBL1324333 |
| 7.40 | Potency | 39.8 | nM | CHEMBL1572517 |
PubChem BioAssay actives
1 with measured affinity, of 13 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149214: Binding affinity to human RECQL incubated for 45 mins by Kinobead based pull down assay | kd | 0.0281 | uM |
CTD chemical–gene interactions
59 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression, increases expression | 3 |
| sodium arsenite | decreases expression, increases expression | 2 |
| Cadmium | decreases reaction, increases abundance, increases palmitoylation, increases expression | 2 |
| Aflatoxin B1 | affects expression, decreases methylation | 2 |
| Cadmium Chloride | increases abundance, increases palmitoylation, increases expression, decreases reaction | 2 |
| Particulate Matter | decreases expression, increases abundance, affects cotreatment | 2 |
| FR900359 | decreases phosphorylation | 1 |
| bisphenol F | increases expression | 1 |
| dicrotophos | decreases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| propionaldehyde | decreases expression | 1 |
| testosterone undecanoate | affects cotreatment, decreases expression | 1 |
| kojic acid | decreases expression | 1 |
| beta-lapachone | decreases expression | 1 |
| arsenite | affects binding, decreases reaction | 1 |
| butyraldehyde | decreases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| 2-bromopalmitate | increases abundance, increases palmitoylation, decreases reaction | 1 |
| 1,2,5,6-dibenzanthracene | increases expression | 1 |
| pentanal | decreases expression | 1 |
| 2,3-dimethoxy-1,4-naphthoquinone | decreases expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| bisphenol B | increases expression | 1 |
| trans-10,cis-12-conjugated linoleic acid | increases expression | 1 |
| abrine | decreases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Sunitinib | decreases expression | 1 |
ChEMBL screening assays
6 unique, capped per target: 4 functional, 2 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1613829 | Functional | PUBCHEM_BIOASSAY: qHTS Assay for Inhibitors of RecQ-Like Dna Helicase 1 (RECQ1). (Class of assay: confirmatory) [Related pubchem assays: 594 (Rhodamine region spectral profiling screen), 593 (Fluorescein region spectral profiling screen), 2 | PubChem BioAssay data set |
| CHEMBL2428259 | Binding | Inhibition of RECQ1 (unknown origin) by gel-based DNA unwinding assay | Synthesis and SAR studies of 5-(pyridin-4-yl)-1,3,4-thiadiazol-2-amine derivatives as potent inhibitors of Bloom helicase. — Bioorg Med Chem Lett |
Cellosaurus cell lines
5 cell lines: 5 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D1QC | Abcam K-562 RECQL KO | Cancer cell line | Female |
| CVCL_D2LY | Abcam Raji RECQL KO | Cancer cell line | Male |
| CVCL_TI69 | HAP1 RECQL (-) 1 | Cancer cell line | Male |
| CVCL_TI70 | HAP1 RECQL (-) 2 | Cancer cell line | Male |
| CVCL_WQ46 | Abcam Jurkat RECQL KO | Cancer cell line | Male |
Clinical trials (associated diseases)
599 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00014638 | PHASE4 | COMPLETED | Letrozole in Treating Postmenopausal Women With Metastatic Breast Cancer |
| NCT00022386 | PHASE4 | COMPLETED | Epoetin Alfa in Treating Chemotherapy-Related Anemia in Women With Stage I, Stage II, or Stage III Breast Cancer |
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00030758 | PHASE4 | UNKNOWN | Filgrastim or Pegfilgrastim in Preventing Neutropenia in Women Receiving Chemotherapy Following Surgery for Breast Cancer |
| NCT00082277 | PHASE4 | COMPLETED | Anastrozole Biphosphonate Study in Postmenopausal Women With Hormone-Receptor-Positive Early Breast Cancer |
| NCT00087620 | PHASE4 | TERMINATED | A Study of Capecitabine In Combination With Docetaxel vs Capecitabine Followed by Docetaxel As First-Line Treatment For Metastatic Breast Cancer |
| NCT00121836 | PHASE4 | COMPLETED | A Study of Xeloda (Capecitabine) in Women With HER2-Negative Metastatic Breast Cancer |
| NCT00126360 | PHASE4 | UNKNOWN | STARS Breast Trial (Study of Anastrozole and Radiotherapy Sequencing Pilot) |
| NCT00127933 | PHASE4 | COMPLETED | XeNA Study - A Study of Xeloda (Capecitabine) in Patients With Invasive Breast Cancer |
| NCT00128297 | PHASE4 | COMPLETED | Pamidronate Administration in Breast Cancer Patients With Bone Metastases |
| NCT00129597 | PHASE4 | UNKNOWN | Effect of Ketalar to Prevent Postoperative Chronic Pain After Mastectomy |
| NCT00131170 | PHASE4 | COMPLETED | Paravertebral Block for Breast Surgery |
| NCT00156039 | PHASE4 | COMPLETED | Randomized Trial of Follow-up Strategies in Breast Cancer |
| NCT00160901 | PHASE4 | COMPLETED | Complementary Therapies for the Reduction of Side Effects During Chemotherapy for Breast Cancer |
| NCT00171847 | PHASE4 | TERMINATED | Study of the Efficacy and Safety of Letrozole Combined With Trastuzumab in Patients With Metastatic Breast Cancer |
| NCT00176046 | PHASE4 | COMPLETED | Mistletoe Extract in Early or Advanced Breast Cancer, A Feasibility Study |
| NCT00190697 | PHASE4 | COMPLETED | A Study of LY353381 (Arzoxifene) for Patients Who Benefitted From This Drug in Other Oncology Trials and Wished to Continue Treatment |
| NCT00234195 | PHASE4 | COMPLETED | Wellbutrin XL, Major Depressive Disorder and Breast Cancer |
| NCT00237133 | PHASE4 | COMPLETED | Treatment of Locally Advanced Breast Cancer With Letrozole in Postmenopausal Women |
| NCT00237224 | PHASE4 | COMPLETED | Open Label Study of Postmenopausal Women With ER and /or PgR Positive Breast Cancer Treated With Letrozole |
| NCT00241046 | PHASE4 | TERMINATED | Letrozole in the Treatment of 1st and 2nd Line Hormone Receptor Positive Breast Cancer: Pre-therapeutic Risk Assessment |
| NCT00277160 | PHASE4 | COMPLETED | A Study of Primary Prophylaxis With Neulasta (Pegfilgrastim) Versus Secondary Prophylaxis After Chemotherapy in Elderly Subjects (>/= 65 Years Old) With Cancer |
| NCT00323479 | PHASE4 | COMPLETED | Arthralgia During Anastrozole Therapy for Breast Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00356148 | PHASE4 | COMPLETED | The Efficacy of Prophylactic Antibiotic Administration During Breast Cancer Surgery in Overweight Patients. |
| NCT00372476 | PHASE4 | COMPLETED | Efficacy and Safety of Imatinib and Vinorelbine in Patients With Advanced Breast Cancer |
| NCT00413491 | PHASE4 | UNKNOWN | National Screening in Denmark With MR Versus Mammography and Ultrasound of Women With BRCA1 or BRCA2 Mutations |
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Related Atlas pages
- Associated diseases: breast carcinoma, familial ovarian cancer, RECON progeroid syndrome, hereditary breast carcinoma
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): breast cancer, familial ovarian cancer, hepatoblastoma, RECON progeroid syndrome